RNA–Protein interactions for RNA: ENST00000581010.1

SENP3-205, Transcript of SUMO specific peptidase 3, humanhuman

Gene SENP3, Length 527 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SENP3-205ENST00000581010 KIF4BQ2VIQ3 1234 aa8.72□□□□□ -1.01
SENP3-205ENST00000581010 FAM47AQ5JRC9 791 aa8.72□□□□□ -1.01
SENP3-205ENST00000581010 PPP4R3BQ5MIZ7 849 aa8.72□□□□□ -1.01
SENP3-205ENST00000581010 RGMBQ6NW40 437 aa8.72□□□□□ -1.01
SENP3-205ENST00000581010 C16orf86Q6ZW13 317 aa8.72□□□□□ -1.01
SENP3-205ENST00000581010 MICU3Q86XE3 530 aa8.72□□□□□ -1.01
SENP3-205ENST00000581010 NUP133Q8WUM0 1156 aa8.72□□□□□ -1.01
SENP3-205ENST00000581010 DYNLL2Q96FJ2 89 aa8.72□□□□□ -1.01
SENP3-205ENST00000581010 ZNF274Q96GC6 653 aaPredicted RBP8.72□□□□□ -1.01
SENP3-205ENST00000581010 PRMT6Q96LA8 375 aaPredicted RBP8.72□□□□□ -1.01
SENP3-205ENST00000581010 GMLQ99445 158 aa8.72□□□□□ -1.01
SENP3-205ENST00000581010 IDI2Q9BXS1 227 aa8.72□□□□□ -1.01
SENP3-205ENST00000581010 KAT14Q9H8E8 782 aa8.72□□□□□ -1.01
SENP3-205ENST00000581010 PI4KBQ9UBF8 816 aa8.72□□□□□ -1.01
SENP3-205ENST00000581010 ZNF70Q9UC06 446 aaPredicted RBP8.72□□□□□ -1.01
SENP3-205ENST00000581010 CNOT7Q9UIV1 285 aaKnown RBP8.72□□□□□ -1.01
SENP3-205ENST00000581010 CCDC196A0A1B0GTZ2 297 aa8.71□□□□□ -1.02
SENP3-205ENST00000581010 NPM3O75607 178 aaKnown RBP8.71□□□□□ -1.02
SENP3-205ENST00000581010 LARGE1O95461 756 aa8.71□□□□□ -1.02
SENP3-205ENST00000581010 CALM1P0DP23 149 aa8.71□□□□□ -1.02
SENP3-205ENST00000581010 CALM2P0DP24 149 aa8.71□□□□□ -1.02
SENP3-205ENST00000581010 CALM3P0DP25 149 aa8.71□□□□□ -1.02
SENP3-205ENST00000581010 PDCP20941 246 aa8.71□□□□□ -1.02
SENP3-205ENST00000581010 LIFRP42702 1097 aa8.71□□□□□ -1.02
SENP3-205ENST00000581010 CDK8P49336 464 aa8.71□□□□□ -1.02
SENP3-205ENST00000581010 NFIAQ12857 509 aa8.71□□□□□ -1.02
SENP3-205ENST00000581010 CUL4AQ13619 759 aa8.71□□□□□ -1.02
SENP3-205ENST00000581010 SPDYE2Q495Y8 402 aa8.71□□□□□ -1.02
SENP3-205ENST00000581010 TBC1D10BQ4KMP7 808 aaPredicted RBP8.71□□□□□ -1.02
SENP3-205ENST00000581010 FBXL16Q8N461 479 aa8.71□□□□□ -1.02
SENP3-205ENST00000581010 MTMR14Q8NCE2 650 aa8.71□□□□□ -1.02
SENP3-205ENST00000581010 CTCFLQ8NI51 663 aaPredicted RBP8.71□□□□□ -1.02
SENP3-205ENST00000581010 DPF2Q92785 391 aa8.71□□□□□ -1.02
SENP3-205ENST00000581010 GTF3C6Q969F1 213 aa8.71□□□□□ -1.02
SENP3-205ENST00000581010 CSRNP1Q96S65 589 aa8.71□□□□□ -1.02
SENP3-205ENST00000581010 LY9Q9HBG7 655 aa8.71□□□□□ -1.02
SENP3-205ENST00000581010 DDX4Q9NQI0 724 aaKnown RBP8.71□□□□□ -1.02
SENP3-205ENST00000581010 ADARB2Q9NS39 739 aaKnown RBP8.71□□□□□ -1.02
SENP3-205ENST00000581010 TAOK2Q9UL54 1235 aa8.71□□□□□ -1.02
SENP3-205ENST00000581010 DDX52Q9Y2R4 599 aaKnown RBP eCLIP8.71□□□□□ -1.02
SENP3-205ENST00000581010 PCDHAC2Q9Y5I4 1007 aa8.71□□□□□ -1.02
SENP3-205ENST00000581010 COL2A1P02458 1487 aaPredicted RBP8.7□□□□□ -1.02
SENP3-205ENST00000581010 POTEFA5A3E0 1075 aa8.7□□□□□ -1.02
SENP3-205ENST00000581010 H3BQV1 296 aa8.7□□□□□ -1.02
SENP3-205ENST00000581010 PFKFB2O60825 505 aa8.7□□□□□ -1.02
SENP3-205ENST00000581010 PDIA4P13667 645 aaKnown RBP8.7□□□□□ -1.02
SENP3-205ENST00000581010 GJB2P29033 226 aa8.7□□□□□ -1.02
SENP3-205ENST00000581010 PDIA3P30101 505 aaKnown RBP8.7□□□□□ -1.02
SENP3-205ENST00000581010 ZNF280AP59817 542 aaPredicted RBP8.7□□□□□ -1.02
SENP3-205ENST00000581010 HMGN5P82970 282 aaKnown RBP8.7□□□□□ -1.02
SENP3-205ENST00000581010 AKAP17AQ02040 695 aaKnown RBP8.7□□□□□ -1.02
SENP3-205ENST00000581010 RTN1Q16799 776 aa8.7□□□□□ -1.02
SENP3-205ENST00000581010 RAB11FIP4Q86YS3 637 aa8.7□□□□□ -1.02
SENP3-205ENST00000581010 CCDC144CPQ8IYA2 1237 aa8.7□□□□□ -1.02
SENP3-205ENST00000581010 TRIM22Q8IYM9 498 aa8.7□□□□□ -1.02
SENP3-205ENST00000581010 ZNF654Q8IZM8 581 aa8.7□□□□□ -1.02
SENP3-205ENST00000581010 SLC44A5Q8NCS7 719 aa8.7□□□□□ -1.02
SENP3-205ENST00000581010 FAM151AQ8WW52 585 aa8.7□□□□□ -1.02
SENP3-205ENST00000581010 HOOK2Q96ED9 719 aa8.7□□□□□ -1.02
SENP3-205ENST00000581010 LLPHQ9BRT6 129 aaKnown RBP8.7□□□□□ -1.02
SENP3-205ENST00000581010 AGXT2Q9BYV1 514 aa8.7□□□□□ -1.02
SENP3-205ENST00000581010 EHD4Q9H223 541 aa8.7□□□□□ -1.02
SENP3-205ENST00000581010 XPO5Q9HAV4 1204 aaKnown RBP eCLIP8.7□□□□□ -1.02
SENP3-205ENST00000581010 GPHNQ9NQX3 736 aaPredicted RBP8.7□□□□□ -1.02
SENP3-205ENST00000581010 GPRC5DQ9NZD1 345 aa8.7□□□□□ -1.02
SENP3-205ENST00000581010 ISY1Q9ULR0 285 aaKnown RBP8.7□□□□□ -1.02
SENP3-205ENST00000581010 STX8Q9UNK0 236 aa8.7□□□□□ -1.02
SENP3-205ENST00000581010 COL6A3P12111 3177 aa8.7□□□□□ -1.02
SENP3-205ENST00000581010 MYH6P13533 1939 aa8.7□□□□□ -1.02
SENP3-205ENST00000581010 VPS37CA5D8V6 355 aaPredicted RBP8.69□□□□□ -1.02
SENP3-205ENST00000581010 SMIM22K7EJ46 135 aa8.69□□□□□ -1.02
SENP3-205ENST00000581010 WNT10BO00744 389 aa8.69□□□□□ -1.02
SENP3-205ENST00000581010 DDAH1O94760 285 aa8.69□□□□□ -1.02
SENP3-205ENST00000581010 FGRP09769 529 aa8.69□□□□□ -1.02
SENP3-205ENST00000581010 RASA1P20936 1047 aa8.69□□□□□ -1.02
SENP3-205ENST00000581010 KIF5BP33176 963 aa8.69□□□□□ -1.02
SENP3-205ENST00000581010 ZNF157P51786 506 aaPredicted RBP8.69□□□□□ -1.02
SENP3-205ENST00000581010 ATP2B2Q01814 1243 aa8.69□□□□□ -1.02
SENP3-205ENST00000581010 EVX2Q03828 476 aa8.69□□□□□ -1.02
SENP3-205ENST00000581010 SCRN1Q12765 414 aa8.69□□□□□ -1.02
SENP3-205ENST00000581010 COL9A3Q14050 684 aaPredicted RBP8.69□□□□□ -1.02
SENP3-205ENST00000581010 PKN2Q16513 984 aaKnown RBP8.69□□□□□ -1.02
SENP3-205ENST00000581010 NBPF9Q3BBW0 867 aa8.69□□□□□ -1.02
SENP3-205ENST00000581010 CERKLQ49MI3 558 aaPredicted RBP8.69□□□□□ -1.02
SENP3-205ENST00000581010 FKBP1CQ5VVH2 108 aa8.69□□□□□ -1.02
SENP3-205ENST00000581010 APOA5Q6Q788 366 aa8.69□□□□□ -1.02
SENP3-205ENST00000581010 SAMD7Q7Z3H4 446 aa8.69□□□□□ -1.02
SENP3-205ENST00000581010 USP48Q86UV5 1035 aa8.69□□□□□ -1.02
SENP3-205ENST00000581010 FAM83AQ86UY5 434 aa8.69□□□□□ -1.02
SENP3-205ENST00000581010 SGMS1Q86VZ5 419 aa8.69□□□□□ -1.02
SENP3-205ENST00000581010 APOBEC3FQ8IUX4 373 aaKnown RBP8.69□□□□□ -1.02
SENP3-205ENST00000581010 FOXP4Q8IVH2 680 aaPredicted RBP8.69□□□□□ -1.02
SENP3-205ENST00000581010 ENAHQ8N8S7 591 aaPredicted RBP8.69□□□□□ -1.02
SENP3-205ENST00000581010 IGDCC4Q8TDY8 1250 aa8.69□□□□□ -1.02
SENP3-205ENST00000581010 ZNF296Q8WUU4 475 aaPredicted RBP8.69□□□□□ -1.02
SENP3-205ENST00000581010 DDX11Q96FC9 970 aa8.69□□□□□ -1.02
SENP3-205ENST00000581010 CCDC17Q96LX7 622 aa8.69□□□□□ -1.02
SENP3-205ENST00000581010 GBP4Q96PP9 640 aa8.69□□□□□ -1.02
SENP3-205ENST00000581010 MYL10Q9BUA6 226 aa8.69□□□□□ -1.02
SENP3-205ENST00000581010 NCOA5Q9HCD5 579 aaKnown RBP8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms