RNA–Protein interactions for RNA: ENST00000580997.1

SENP3-204, Transcript of SUMO specific peptidase 3, humanhuman

TSL 2

Gene SENP3, Length 679 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SENP3-204ENST00000580997 CAPN2P17655 700 aa15.08■□□□□ 0
SENP3-204ENST00000580997 UBE3CQ15386 1083 aa15.08■□□□□ 0
SENP3-204ENST00000580997 POTEEQ6S8J3 1075 aa15.08■□□□□ 0
SENP3-204ENST00000580997 GPRC5AQ8NFJ5 357 aa15.08■□□□□ 0
SENP3-204ENST00000580997 SDR42E1Q8WUS8 393 aa15.08■□□□□ 0
SENP3-204ENST00000580997 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.08■□□□□ 0
SENP3-204ENST00000580997 UNC93B1Q9H1C4 597 aa15.08■□□□□ 0
SENP3-204ENST00000580997 TXNRD2Q9NNW7 524 aa15.08■□□□□ 0
SENP3-204ENST00000580997 DDX60LQ5H9U9 1706 aaKnown RBP15.07■□□□□ 0
SENP3-204ENST00000580997 INHAP05111 366 aa15.07■□□□□ 0
SENP3-204ENST00000580997 GUCY1A2P33402 732 aa15.07■□□□□ 0
SENP3-204ENST00000580997 USP14P54578 494 aa15.07■□□□□ 0
SENP3-204ENST00000580997 RAB3GAP1Q15042 981 aa15.07■□□□□ 0
SENP3-204ENST00000580997 SLFNL1Q499Z3 407 aa15.07■□□□□ 0
SENP3-204ENST00000580997 U2AF1L4Q8WU68 220 aaKnown RBP15.07■□□□□ 0
SENP3-204ENST00000580997 GTF3C2Q8WUA4 911 aaPredicted RBP15.07■□□□□ 0
SENP3-204ENST00000580997 BCL11AQ9H165 835 aa15.07■□□□□ 0
SENP3-204ENST00000580997 ARMT1Q9H993 441 aa15.07■□□□□ 0
SENP3-204ENST00000580997 CABP5Q9NP86 173 aa15.07■□□□□ 0
SENP3-204ENST00000580997 PAK6Q9NQU5 681 aaPredicted RBP15.07■□□□□ 0
SENP3-204ENST00000580997 ATP8A2Q9NTI2 1148 aa15.07■□□□□ 0
SENP3-204ENST00000580997 SMARCA5O60264 1052 aaPredicted RBP15.06■□□□□ 0
SENP3-204ENST00000580997 SGPL1O95470 568 aa15.06■□□□□ 0
SENP3-204ENST00000580997 Q3C1V9 767 aa15.06■□□□□ 0
SENP3-204ENST00000580997 ACER1Q8TDN7 264 aa15.06■□□□□ 0
SENP3-204ENST00000580997 GCC1Q96CN9 775 aa15.06■□□□□ 0
SENP3-204ENST00000580997 ECHDC1Q9NTX5 307 aa15.06■□□□□ 0
SENP3-204ENST00000580997 SWAP70Q9UH65 585 aa15.06■□□□□ 0
SENP3-204ENST00000580997 USP17L15C9J2P7 530 aa15.05■□□□□ -0
SENP3-204ENST00000580997 USP17L13C9JLJ4 530 aa15.05■□□□□ -0
SENP3-204ENST00000580997 USP17L11C9JVI0 530 aa15.05■□□□□ -0
SENP3-204ENST00000580997 USP17L18D6R9N7 530 aa15.05■□□□□ -0
SENP3-204ENST00000580997 USP17L22D6RA61 530 aa15.05■□□□□ -0
SENP3-204ENST00000580997 USP17L17D6RBQ6 530 aa15.05■□□□□ -0
SENP3-204ENST00000580997 USP17L19D6RCP7 530 aa15.05■□□□□ -0
SENP3-204ENST00000580997 USP17L20D6RJB6 530 aa15.05■□□□□ -0
SENP3-204ENST00000580997 PRKAB2O43741 272 aa15.05■□□□□ -0
SENP3-204ENST00000580997 PEX10O60683 326 aa15.05■□□□□ -0
SENP3-204ENST00000580997 ERVK-9P63128 1117 aa15.05■□□□□ -0
SENP3-204ENST00000580997 ERVK-24P63145 666 aa15.05■□□□□ -0
SENP3-204ENST00000580997 USP17L24Q0WX57 530 aa15.05■□□□□ -0
SENP3-204ENST00000580997 SEPT2Q15019 361 aa15.05■□□□□ -0
SENP3-204ENST00000580997 ZSCAN25Q6NSZ9 544 aa15.05■□□□□ -0
SENP3-204ENST00000580997 LBX2Q6XYB7 198 aa15.05■□□□□ -0
SENP3-204ENST00000580997 CATSPERGQ6ZRH7 1159 aa15.05■□□□□ -0
SENP3-204ENST00000580997 MBD4O95243 580 aa15.04■□□□□ -0
SENP3-204ENST00000580997 HMGCRP04035 888 aa15.04■□□□□ -0
SENP3-204ENST00000580997 CHGBP05060 677 aa15.04■□□□□ -0
SENP3-204ENST00000580997 CYP2D6P10635 497 aa15.04■□□□□ -0
SENP3-204ENST00000580997 XRCC5P13010 732 aaKnown RBP15.04■□□□□ -0
SENP3-204ENST00000580997 VCAM1P19320 739 aa15.04■□□□□ -0
SENP3-204ENST00000580997 MAPK4P31152 587 aa15.04■□□□□ -0
SENP3-204ENST00000580997 USP6NLQ92738 828 aa15.04■□□□□ -0
SENP3-204ENST00000580997 FEZ1Q99689 392 aa15.04■□□□□ -0
SENP3-204ENST00000580997 CRISPLD2Q9H0B8 497 aa15.04■□□□□ -0
SENP3-204ENST00000580997 RABGAP1Q9Y3P9 1069 aa15.04■□□□□ -0
SENP3-204ENST00000580997 A0A1W2PRG0 241 aa15.03■□□□□ -0
SENP3-204ENST00000580997 ZYXQ15942 572 aaKnown RBP15.03■□□□□ -0
SENP3-204ENST00000580997 C12orf60Q5U649 245 aa15.03■□□□□ -0
SENP3-204ENST00000580997 SIAH1Q8IUQ4 282 aa15.03■□□□□ -0
SENP3-204ENST00000580997 SOCS4Q8WXH5 440 aa15.03■□□□□ -0
SENP3-204ENST00000580997 PUS7LQ9H0K6 701 aaKnown RBP15.03■□□□□ -0
SENP3-204ENST00000580997 DOCK3Q8IZD9 2030 aa15.03■□□□□ -0
SENP3-204ENST00000580997 USP17L12C9JPN9 530 aa15.02■□□□□ -0
SENP3-204ENST00000580997 USP17L21D6R901 530 aa15.02■□□□□ -0
SENP3-204ENST00000580997 CNMDO75829 334 aa15.02■□□□□ -0
SENP3-204ENST00000580997 MORN1Q5T089 497 aa15.02■□□□□ -0
SENP3-204ENST00000580997 POTEGQ6S5H5 508 aa15.02■□□□□ -0
SENP3-204ENST00000580997 TMEM179Q6ZVK1 233 aa15.02■□□□□ -0
SENP3-204ENST00000580997 KBTBD3Q8NAB2 608 aa15.02■□□□□ -0
SENP3-204ENST00000580997 SLC44A5Q8NCS7 719 aa15.02■□□□□ -0
SENP3-204ENST00000580997 DYNLL2Q96FJ2 89 aa15.02■□□□□ -0
SENP3-204ENST00000580997 DEFB118Q96PH6 123 aa15.02■□□□□ -0
SENP3-204ENST00000580997 NUDT12Q9BQG2 462 aa15.02■□□□□ -0
SENP3-204ENST00000580997 PORCNQ9H237 461 aa15.02■□□□□ -0
SENP3-204ENST00000580997 PCDHB15Q9Y5E8 787 aa15.02■□□□□ -0
SENP3-204ENST00000580997 RPTORQ8N122 1335 aa15.01□□□□□ -0.01
SENP3-204ENST00000580997 MPHOSPH10O00566 681 aaKnown RBP15.01□□□□□ -0.01
SENP3-204ENST00000580997 TFRCP02786 760 aaKnown RBP15.01□□□□□ -0.01
SENP3-204ENST00000580997 MAP3K21Q5TCX8 1036 aa15.01□□□□□ -0.01
SENP3-204ENST00000580997 GPR142Q7Z601 462 aa15.01□□□□□ -0.01
SENP3-204ENST00000580997 TRIB2Q92519 343 aa15.01□□□□□ -0.01
SENP3-204ENST00000580997 GPATCH3Q96I76 525 aa15.01□□□□□ -0.01
SENP3-204ENST00000580997 CCDC17Q96LX7 622 aa15.01□□□□□ -0.01
SENP3-204ENST00000580997 STRBPQ96SI9 672 aaKnown RBP15.01□□□□□ -0.01
SENP3-204ENST00000580997 PAGR1Q9BTK6 254 aa15.01□□□□□ -0.01
SENP3-204ENST00000580997 XRN2Q9H0D6 950 aaKnown RBP eCLIP15.01□□□□□ -0.01
SENP3-204ENST00000580997 RPAP3Q9H6T3 665 aaPredicted RBP15.01□□□□□ -0.01
SENP3-204ENST00000580997 SLC4A4Q9Y6R1 1079 aa15.01□□□□□ -0.01
SENP3-204ENST00000580997 NAV1Q8NEY1 1877 aa15.01□□□□□ -0.01
SENP3-204ENST00000580997 SPDYE16A6NNV3 312 aaPredicted RBP15□□□□□ -0.01
SENP3-204ENST00000580997 H0YGN5 161 aa15□□□□□ -0.01
SENP3-204ENST00000580997 SMIM22K7EJ46 135 aa15□□□□□ -0.01
SENP3-204ENST00000580997 FARP2O94887 1054 aaPredicted RBP15□□□□□ -0.01
SENP3-204ENST00000580997 CDK8P49336 464 aa15□□□□□ -0.01
SENP3-204ENST00000580997 CCNA1P78396 465 aa15□□□□□ -0.01
SENP3-204ENST00000580997 TRIM32Q13049 653 aa15□□□□□ -0.01
SENP3-204ENST00000580997 COG2Q14746 738 aa15□□□□□ -0.01
SENP3-204ENST00000580997 HABP4Q5JVS0 413 aaKnown RBP15□□□□□ -0.01
SENP3-204ENST00000580997 CTR9Q6PD62 1173 aa15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms