RNA–Protein interactions for RNA: ENST00000579221.5

SLC6A4-205, Transcript of solute carrier family 6 member 4, humanhuman

TSL 1 (best)

Gene SLC6A4, Length 1,069 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4-205ENST00000579221 SREBF2Q12772 1141 aa18.39■□□□□ 0.53
SLC6A4-205ENST00000579221 ARHGEF10LQ9HCE6 1279 aa18.39■□□□□ 0.53
SLC6A4-205ENST00000579221 LAMB1P07942 1786 aa18.38■□□□□ 0.53
SLC6A4-205ENST00000579221 TM4SF4P48230 202 aa18.38■□□□□ 0.53
SLC6A4-205ENST00000579221 BACE1P56817 501 aa18.38■□□□□ 0.53
SLC6A4-205ENST00000579221 ICA1Q05084 483 aa18.38■□□□□ 0.53
SLC6A4-205ENST00000579221 FASTKD5Q7L8L6 764 aaKnown RBP18.38■□□□□ 0.53
SLC6A4-205ENST00000579221 NCOA7Q8NI08 942 aa18.38■□□□□ 0.53
SLC6A4-205ENST00000579221 MS4A4AQ96JQ5 239 aa18.38■□□□□ 0.53
SLC6A4-205ENST00000579221 GNL3Q9BVP2 549 aaKnown RBP eCLIP18.38■□□□□ 0.53
SLC6A4-205ENST00000579221 NYAP2Q9P242 653 aa18.38■□□□□ 0.53
SLC6A4-205ENST00000579221 IGKV6D-41A0A0C4DH26 115 aa18.37■□□□□ 0.53
SLC6A4-205ENST00000579221 TESPA1A2RU30 521 aaPredicted RBP18.37■□□□□ 0.53
SLC6A4-205ENST00000579221 B4E1Z4 1266 aa18.37■□□□□ 0.53
SLC6A4-205ENST00000579221 KDM4AO75164 1064 aa18.37■□□□□ 0.53
SLC6A4-205ENST00000579221 MCCP23508 829 aa18.37■□□□□ 0.53
SLC6A4-205ENST00000579221 HSPA4P34932 840 aa18.37■□□□□ 0.53
SLC6A4-205ENST00000579221 USP14P54578 494 aa18.37■□□□□ 0.53
SLC6A4-205ENST00000579221 ATP2B2Q01814 1243 aa18.37■□□□□ 0.53
SLC6A4-205ENST00000579221 TSGA10IPQ3SY00 556 aa18.37■□□□□ 0.53
SLC6A4-205ENST00000579221 C8orf34Q49A92 452 aa18.37■□□□□ 0.53
SLC6A4-205ENST00000579221 CCDC178Q5BJE1 867 aa18.37■□□□□ 0.53
SLC6A4-205ENST00000579221 OTUD7BQ6GQQ9 843 aa18.37■□□□□ 0.53
SLC6A4-205ENST00000579221 RALYLQ86SE5 291 aaKnown RBP18.37■□□□□ 0.53
SLC6A4-205ENST00000579221 ZIC5Q96T25 663 aa18.37■□□□□ 0.53
SLC6A4-205ENST00000579221 SH2D4AQ9H788 454 aa18.37■□□□□ 0.53
SLC6A4-205ENST00000579221 TCP11L1Q9NUJ3 509 aa18.37■□□□□ 0.53
SLC6A4-205ENST00000579221 MTMR4Q9NYA4 1195 aa18.37■□□□□ 0.53
SLC6A4-205ENST00000579221 TMOD4Q9NZQ9 345 aa18.37■□□□□ 0.53
SLC6A4-205ENST00000579221 ZSWIM5Q9P217 1185 aa18.37■□□□□ 0.53
SLC6A4-205ENST00000579221 CLIP2Q9UDT6 1046 aa18.37■□□□□ 0.53
SLC6A4-205ENST00000579221 NEDD4P46934 1319 aa18.37■□□□□ 0.53
SLC6A4-205ENST00000579221 OTOFQ9HC10 1997 aa18.37■□□□□ 0.53
SLC6A4-205ENST00000579221 CCL15-CCL14A0A0B4J2E2 113 aa18.36■□□□□ 0.53
SLC6A4-205ENST00000579221 A0A0G2JLL6 359 aaPredicted RBP18.36■□□□□ 0.53
SLC6A4-205ENST00000579221 EEF2P13639 858 aaKnown RBP18.36■□□□□ 0.53
SLC6A4-205ENST00000579221 DOCK1Q14185 1865 aa18.36■□□□□ 0.53
SLC6A4-205ENST00000579221 KRT32Q14532 448 aa18.36■□□□□ 0.53
SLC6A4-205ENST00000579221 CCL15Q16663 113 aa18.36■□□□□ 0.53
SLC6A4-205ENST00000579221 SH3D19Q5HYK7 790 aa18.36■□□□□ 0.53
SLC6A4-205ENST00000579221 USP17L2Q6R6M4 530 aa18.36■□□□□ 0.53
SLC6A4-205ENST00000579221 PRRT2Q7Z6L0 340 aaPredicted RBP18.36■□□□□ 0.53
SLC6A4-205ENST00000579221 IQCA1Q86XH1 822 aa18.36■□□□□ 0.53
SLC6A4-205ENST00000579221 SIAH1Q8IUQ4 282 aa18.36■□□□□ 0.53
SLC6A4-205ENST00000579221 ACER1Q8TDN7 264 aa18.36■□□□□ 0.53
SLC6A4-205ENST00000579221 KCNB2Q92953 911 aa18.36■□□□□ 0.53
SLC6A4-205ENST00000579221 CEP95Q96GE4 821 aa18.36■□□□□ 0.53
SLC6A4-205ENST00000579221 PLIN4Q96Q06 1357 aa18.36■□□□□ 0.53
SLC6A4-205ENST00000579221 FEZ1Q99689 392 aa18.36■□□□□ 0.53
SLC6A4-205ENST00000579221 KIAA1683Q9H0B3 1180 aa18.36■□□□□ 0.53
SLC6A4-205ENST00000579221 TTLL1O95922 423 aa18.35■□□□□ 0.53
SLC6A4-205ENST00000579221 MAP2K1Q02750 393 aaPredicted RBP18.35■□□□□ 0.53
SLC6A4-205ENST00000579221 MTMR2Q13614 643 aa18.35■□□□□ 0.53
SLC6A4-205ENST00000579221 GADL1Q6ZQY3 521 aa18.35■□□□□ 0.53
SLC6A4-205ENST00000579221 STOX1Q6ZVD7 989 aa18.35■□□□□ 0.53
SLC6A4-205ENST00000579221 MKL1Q969V6 931 aa18.35■□□□□ 0.53
SLC6A4-205ENST00000579221 TTC14Q96N46 770 aa18.35■□□□□ 0.53
SLC6A4-205ENST00000579221 IL17RBQ9NRM6 502 aa18.35■□□□□ 0.53
SLC6A4-205ENST00000579221 TMX2Q9Y320 296 aa18.35■□□□□ 0.53
SLC6A4-205ENST00000579221 TAF6LQ9Y6J9 622 aa18.35■□□□□ 0.53
SLC6A4-205ENST00000579221 A0A1W2PRG0 241 aa18.34■□□□□ 0.53
SLC6A4-205ENST00000579221 HMGCS2P54868 508 aa18.34■□□□□ 0.53
SLC6A4-205ENST00000579221 CLEC10AQ8IUN9 316 aa18.34■□□□□ 0.53
SLC6A4-205ENST00000579221 PROCA1Q8NCQ7 364 aaPredicted RBP18.34■□□□□ 0.53
SLC6A4-205ENST00000579221 BRI3BPQ8WY22 251 aa18.34■□□□□ 0.53
SLC6A4-205ENST00000579221 NMT2O60551 498 aa18.33■□□□□ 0.52
SLC6A4-205ENST00000579221 SEC24BO95487 1268 aa18.33■□□□□ 0.52
SLC6A4-205ENST00000579221 ZYXQ15942 572 aaKnown RBP18.33■□□□□ 0.52
SLC6A4-205ENST00000579221 IFNL1Q8IU54 200 aa18.33■□□□□ 0.52
SLC6A4-205ENST00000579221 RASEFQ8IZ41 740 aa18.33■□□□□ 0.52
SLC6A4-205ENST00000579221 PTPN18Q99952 460 aa18.33■□□□□ 0.52
SLC6A4-205ENST00000579221 UBAC1Q9BSL1 405 aa18.33■□□□□ 0.52
SLC6A4-205ENST00000579221 EMILIN3Q9NT22 766 aa18.33■□□□□ 0.52
SLC6A4-205ENST00000579221 SYNPO2Q9UMS6 1093 aa18.33■□□□□ 0.52
SLC6A4-205ENST00000579221 STX8Q9UNK0 236 aa18.33■□□□□ 0.52
SLC6A4-205ENST00000579221 BTBD19C9JJ37 291 aa18.32■□□□□ 0.52
SLC6A4-205ENST00000579221 ALDH1A1P00352 501 aa18.32■□□□□ 0.52
SLC6A4-205ENST00000579221 NOVP48745 357 aa18.32■□□□□ 0.52
SLC6A4-205ENST00000579221 MOGSQ13724 837 aa18.32■□□□□ 0.52
SLC6A4-205ENST00000579221 CYB5R4Q7L1T6 521 aa18.32■□□□□ 0.52
SLC6A4-205ENST00000579221 ANKRD23Q86SG2 305 aa18.32■□□□□ 0.52
SLC6A4-205ENST00000579221 DGKHQ86XP1 1220 aa18.32■□□□□ 0.52
SLC6A4-205ENST00000579221 JMYQ8N9B5 988 aa18.32■□□□□ 0.52
SLC6A4-205ENST00000579221 NKX2-3Q8TAU0 364 aa18.32■□□□□ 0.52
SLC6A4-205ENST00000579221 NEK1Q96PY6 1258 aa18.32■□□□□ 0.52
SLC6A4-205ENST00000579221 ZSCAN10Q96SZ4 725 aaPredicted RBP18.32■□□□□ 0.52
SLC6A4-205ENST00000579221 ZKSCAN3Q9BRR0 538 aa18.32■□□□□ 0.52
SLC6A4-205ENST00000579221 BEGAINQ9BUH8 593 aa18.32■□□□□ 0.52
SLC6A4-205ENST00000579221 GOPCQ9HD26 462 aa18.32■□□□□ 0.52
SLC6A4-205ENST00000579221 SNX14Q9Y5W7 946 aa18.32■□□□□ 0.52
SLC6A4-205ENST00000579221 ATAD5Q96QE3 1844 aa18.31■□□□□ 0.52
SLC6A4-205ENST00000579221 ERICH2A1L162 156 aa18.31■□□□□ 0.52
SLC6A4-205ENST00000579221 HMGB1P09429 215 aaKnown RBP18.31■□□□□ 0.52
SLC6A4-205ENST00000579221 PSMA5P28066 241 aa18.31■□□□□ 0.52
SLC6A4-205ENST00000579221 MCM5P33992 734 aa18.31■□□□□ 0.52
SLC6A4-205ENST00000579221 PABPC4Q13310 644 aaKnown RBP eCLIP18.31■□□□□ 0.52
SLC6A4-205ENST00000579221 SART3Q15020 963 aaKnown RBP18.31■□□□□ 0.52
SLC6A4-205ENST00000579221 MB21D2Q8IYB1 491 aaPredicted RBP18.31■□□□□ 0.52
SLC6A4-205ENST00000579221 C12orf42Q96LP6 360 aa18.31■□□□□ 0.52
SLC6A4-205ENST00000579221 VCPKMTQ9H867 229 aa18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms