RNA–Protein interactions for RNA: ENST00000578397.5

PSMD11-207, Transcript of proteasome 26S subunit, non-ATPase 11, humanhuman

TSL 2

Gene PSMD11, Length 1,178 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD11-207ENST00000578397 RNF208Q9H0X6 261 aa16.83■□□□□ 0.28
PSMD11-207ENST00000578397 DCTPP1Q9H773 170 aa16.83■□□□□ 0.28
PSMD11-207ENST00000578397 ATP8A2Q9NTI2 1148 aa16.83■□□□□ 0.28
PSMD11-207ENST00000578397 SMARCA5O60264 1052 aaPredicted RBP16.82■□□□□ 0.28
PSMD11-207ENST00000578397 EVX2Q03828 476 aa16.82■□□□□ 0.28
PSMD11-207ENST00000578397 RAB3GAP1Q15042 981 aa16.82■□□□□ 0.28
PSMD11-207ENST00000578397 GPRC5AQ8NFJ5 357 aa16.82■□□□□ 0.28
PSMD11-207ENST00000578397 ARMT1Q9H993 441 aa16.82■□□□□ 0.28
PSMD11-207ENST00000578397 ECHDC1Q9NTX5 307 aa16.82■□□□□ 0.28
PSMD11-207ENST00000578397 SWAP70Q9UH65 585 aa16.82■□□□□ 0.28
PSMD11-207ENST00000578397 MYH1P12882 1939 aa16.81■□□□□ 0.28
PSMD11-207ENST00000578397 USP17L15C9J2P7 530 aa16.81■□□□□ 0.28
PSMD11-207ENST00000578397 USP17L13C9JLJ4 530 aa16.81■□□□□ 0.28
PSMD11-207ENST00000578397 USP17L11C9JVI0 530 aa16.81■□□□□ 0.28
PSMD11-207ENST00000578397 USP17L18D6R9N7 530 aa16.81■□□□□ 0.28
PSMD11-207ENST00000578397 USP17L22D6RA61 530 aa16.81■□□□□ 0.28
PSMD11-207ENST00000578397 USP17L17D6RBQ6 530 aa16.81■□□□□ 0.28
PSMD11-207ENST00000578397 USP17L19D6RCP7 530 aa16.81■□□□□ 0.28
PSMD11-207ENST00000578397 USP17L20D6RJB6 530 aa16.81■□□□□ 0.28
PSMD11-207ENST00000578397 MBD4O95243 580 aa16.81■□□□□ 0.28
PSMD11-207ENST00000578397 SLC34A2O95436 690 aa16.81■□□□□ 0.28
PSMD11-207ENST00000578397 INHAP05111 366 aa16.81■□□□□ 0.28
PSMD11-207ENST00000578397 ELNP15502 786 aa16.81■□□□□ 0.28
PSMD11-207ENST00000578397 USP17L24Q0WX57 530 aa16.81■□□□□ 0.28
PSMD11-207ENST00000578397 GCC1Q96CN9 775 aa16.81■□□□□ 0.28
PSMD11-207ENST00000578397 SHISA4Q96DD7 197 aa16.81■□□□□ 0.28
PSMD11-207ENST00000578397 GPATCH3Q96I76 525 aa16.81■□□□□ 0.28
PSMD11-207ENST00000578397 GJD2Q9UKL4 321 aa16.81■□□□□ 0.28
PSMD11-207ENST00000578397 MKI67P46013 3256 aaKnown RBP16.8■□□□□ 0.28
PSMD11-207ENST00000578397 ACER1Q8TDN7 264 aa16.8■□□□□ 0.28
PSMD11-207ENST00000578397 DDRGK1Q96HY6 314 aa16.8■□□□□ 0.28
PSMD11-207ENST00000578397 UNC93B1Q9H1C4 597 aa16.8■□□□□ 0.28
PSMD11-207ENST00000578397 TXNRD2Q9NNW7 524 aa16.8■□□□□ 0.28
PSMD11-207ENST00000578397 RBPJLQ9UBG7 517 aa16.8■□□□□ 0.28
PSMD11-207ENST00000578397 BRCA2P51587 3418 aa16.8■□□□□ 0.28
PSMD11-207ENST00000578397 PRKAB2O43741 272 aa16.79■□□□□ 0.28
PSMD11-207ENST00000578397 MAPK4P31152 587 aa16.79■□□□□ 0.28
PSMD11-207ENST00000578397 GUCY1A2P33402 732 aa16.79■□□□□ 0.28
PSMD11-207ENST00000578397 ERVK-9P63128 1117 aa16.79■□□□□ 0.28
PSMD11-207ENST00000578397 ERVK-24P63145 666 aa16.79■□□□□ 0.28
PSMD11-207ENST00000578397 SEPT2Q15019 361 aa16.79■□□□□ 0.28
PSMD11-207ENST00000578397 ZYXQ15942 572 aaKnown RBP16.79■□□□□ 0.28
PSMD11-207ENST00000578397 SLFNL1Q499Z3 407 aa16.79■□□□□ 0.28
PSMD11-207ENST00000578397 AMOTL1Q8IY63 956 aa16.79■□□□□ 0.28
PSMD11-207ENST00000578397 U2AF1L4Q8WU68 220 aaKnown RBP16.79■□□□□ 0.28
PSMD11-207ENST00000578397 MGAMO43451 1857 aa16.79■□□□□ 0.28
PSMD11-207ENST00000578397 MPHOSPH10O00566 681 aaKnown RBP16.78■□□□□ 0.28
PSMD11-207ENST00000578397 SGPL1O95470 568 aa16.78■□□□□ 0.28
PSMD11-207ENST00000578397 HMGCRP04035 888 aa16.78■□□□□ 0.28
PSMD11-207ENST00000578397 CYP2D6P10635 497 aa16.78■□□□□ 0.28
PSMD11-207ENST00000578397 VCAM1P19320 739 aa16.78■□□□□ 0.28
PSMD11-207ENST00000578397 CATSPERGQ6ZRH7 1159 aa16.78■□□□□ 0.28
PSMD11-207ENST00000578397 TMEM179Q6ZVK1 233 aa16.78■□□□□ 0.28
PSMD11-207ENST00000578397 CCAR1Q8IX12 1150 aaKnown RBP16.78■□□□□ 0.28
PSMD11-207ENST00000578397 SOCS4Q8WXH5 440 aa16.78■□□□□ 0.28
PSMD11-207ENST00000578397 RABGAP1Q9Y3P9 1069 aa16.78■□□□□ 0.28
PSMD11-207ENST00000578397 XRCC5P13010 732 aaKnown RBP16.77■□□□□ 0.28
PSMD11-207ENST00000578397 C12orf60Q5U649 245 aa16.77■□□□□ 0.28
PSMD11-207ENST00000578397 LBX2Q6XYB7 198 aa16.77■□□□□ 0.28
PSMD11-207ENST00000578397 UBE2Q1Q7Z7E8 422 aa16.77■□□□□ 0.28
PSMD11-207ENST00000578397 KBTBD3Q8NAB2 608 aa16.77■□□□□ 0.28
PSMD11-207ENST00000578397 CCDC17Q96LX7 622 aa16.77■□□□□ 0.28
PSMD11-207ENST00000578397 NUDT12Q9BQG2 462 aa16.77■□□□□ 0.28
PSMD11-207ENST00000578397 PAGR1Q9BTK6 254 aa16.77■□□□□ 0.28
PSMD11-207ENST00000578397 PAK6Q9NQU5 681 aaPredicted RBP16.77■□□□□ 0.28
PSMD11-207ENST00000578397 SLC4A4Q9Y6R1 1079 aa16.77■□□□□ 0.28
PSMD11-207ENST00000578397 DDX60LQ5H9U9 1706 aaKnown RBP16.76■□□□□ 0.27
PSMD11-207ENST00000578397 USP17L12C9JPN9 530 aa16.76■□□□□ 0.27
PSMD11-207ENST00000578397 USP17L21D6R901 530 aa16.76■□□□□ 0.27
PSMD11-207ENST00000578397 ZFYP08048 801 aaPredicted RBP16.76■□□□□ 0.27
PSMD11-207ENST00000578397 RRP1P56182 461 aaKnown RBP16.76■□□□□ 0.27
PSMD11-207ENST00000578397 CCNA1P78396 465 aa16.76■□□□□ 0.27
PSMD11-207ENST00000578397 Q3C1V9 767 aa16.76■□□□□ 0.27
PSMD11-207ENST00000578397 SLC44A5Q8NCS7 719 aa16.76■□□□□ 0.27
PSMD11-207ENST00000578397 DYNLL2Q96FJ2 89 aa16.76■□□□□ 0.27
PSMD11-207ENST00000578397 PUS7LQ9H0K6 701 aaKnown RBP16.76■□□□□ 0.27
PSMD11-207ENST00000578397 PCDHB15Q9Y5E8 787 aa16.76■□□□□ 0.27
PSMD11-207ENST00000578397 A0A1W2PRG0 241 aa16.75■□□□□ 0.27
PSMD11-207ENST00000578397 C19orf67A6NJJ6 358 aa16.75■□□□□ 0.27
PSMD11-207ENST00000578397 PEX10O60683 326 aa16.75■□□□□ 0.27
PSMD11-207ENST00000578397 TFRCP02786 760 aaKnown RBP16.75■□□□□ 0.27
PSMD11-207ENST00000578397 CHGBP05060 677 aa16.75■□□□□ 0.27
PSMD11-207ENST00000578397 LRRFIP1Q32MZ4 808 aaKnown RBP16.75■□□□□ 0.27
PSMD11-207ENST00000578397 POTEEQ6S8J3 1075 aa16.75■□□□□ 0.27
PSMD11-207ENST00000578397 C16orf86Q6ZW13 317 aa16.75■□□□□ 0.27
PSMD11-207ENST00000578397 PLEKHH3Q7Z736 793 aa16.75■□□□□ 0.27
PSMD11-207ENST00000578397 TRMT44Q8IYL2 757 aaKnown RBP16.75■□□□□ 0.27
PSMD11-207ENST00000578397 DEFB118Q96PH6 123 aa16.75■□□□□ 0.27
PSMD11-207ENST00000578397 HTATIP2Q9BUP3 242 aa16.75■□□□□ 0.27
PSMD11-207ENST00000578397 PORCNQ9H237 461 aa16.75■□□□□ 0.27
PSMD11-207ENST00000578397 RPAP3Q9H6T3 665 aaPredicted RBP16.75■□□□□ 0.27
PSMD11-207ENST00000578397 DOCK3Q8IZD9 2030 aa16.75■□□□□ 0.27
PSMD11-207ENST00000578397 TTC41PQ6P2S7 1318 aa16.74■□□□□ 0.27
PSMD11-207ENST00000578397 RPTORQ8N122 1335 aa16.74■□□□□ 0.27
PSMD11-207ENST00000578397 NAV1Q8NEY1 1877 aa16.74■□□□□ 0.27
PSMD11-207ENST00000578397 GLRX3O76003 335 aaKnown RBP16.74■□□□□ 0.27
PSMD11-207ENST00000578397 FARP2O94887 1054 aaPredicted RBP16.74■□□□□ 0.27
PSMD11-207ENST00000578397 CYP2B6P20813 491 aa16.74■□□□□ 0.27
PSMD11-207ENST00000578397 CDK8P49336 464 aa16.74■□□□□ 0.27
PSMD11-207ENST00000578397 GIMAP6Q6P9H5 292 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 122.1 ms