RNA–Protein interactions for RNA: ENST00000578217.1

SLC46A1-201, Transcript of solute carrier family 46 member 1, humanhuman

TSL 4

Gene SLC46A1, Length 596 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC46A1-201ENST00000578217 CAVIN4Q5BKX8 364 aa10.11□□□□□ -0.79
SLC46A1-201ENST00000578217 METTL24Q5JXM2 366 aa10.11□□□□□ -0.79
SLC46A1-201ENST00000578217 GJC2Q5T442 439 aaPredicted RBP10.11□□□□□ -0.79
SLC46A1-201ENST00000578217 ANKRD44Q8N8A2 993 aa10.11□□□□□ -0.79
SLC46A1-201ENST00000578217 IDI2Q9BXS1 227 aa10.11□□□□□ -0.79
SLC46A1-201ENST00000578217 PRDM5Q9NQX1 630 aaPredicted RBP10.11□□□□□ -0.79
SLC46A1-201ENST00000578217 RBPJLQ9UBG7 517 aa10.11□□□□□ -0.79
SLC46A1-201ENST00000578217 PNMA3Q9UL41 463 aa10.11□□□□□ -0.79
SLC46A1-201ENST00000578217 ATAD5Q96QE3 1844 aa10.11□□□□□ -0.79
SLC46A1-201ENST00000578217 TRANK1O15050 2925 aa10.11□□□□□ -0.79
SLC46A1-201ENST00000578217 BRWD1Q9NSI6 2320 aa10.11□□□□□ -0.79
SLC46A1-201ENST00000578217 NBPF7P0C2Y1 421 aaPredicted RBP10.1□□□□□ -0.79
SLC46A1-201ENST00000578217 DNAJB2P25686 324 aa10.1□□□□□ -0.79
SLC46A1-201ENST00000578217 RALBP1Q15311 655 aa10.1□□□□□ -0.79
SLC46A1-201ENST00000578217 CCDC85BQ15834 202 aaPredicted RBP10.1□□□□□ -0.79
SLC46A1-201ENST00000578217 GPR142Q7Z601 462 aa10.1□□□□□ -0.79
SLC46A1-201ENST00000578217 ZSCAN29Q8IWY8 852 aaPredicted RBP10.1□□□□□ -0.79
SLC46A1-201ENST00000578217 EPHX3Q9H6B9 360 aa10.1□□□□□ -0.79
SLC46A1-201ENST00000578217 PCDHGA10Q9Y5H3 936 aa10.1□□□□□ -0.79
SLC46A1-201ENST00000578217 GRXCR1A8MXD5 290 aa10.09□□□□□ -0.79
SLC46A1-201ENST00000578217 ENTPD3O75355 529 aa10.09□□□□□ -0.79
SLC46A1-201ENST00000578217 IGHA2P01877 340 aa10.09□□□□□ -0.79
SLC46A1-201ENST00000578217 PBX2P40425 430 aa10.09□□□□□ -0.79
SLC46A1-201ENST00000578217 PICALMQ13492 652 aa10.09□□□□□ -0.79
SLC46A1-201ENST00000578217 ANO1Q5XXA6 986 aa10.09□□□□□ -0.79
SLC46A1-201ENST00000578217 SLC39A5Q6ZMH5 540 aa10.09□□□□□ -0.79
SLC46A1-201ENST00000578217 ZNF687Q8N1G0 1237 aa10.09□□□□□ -0.79
SLC46A1-201ENST00000578217 ZNF280CQ8ND82 737 aa10.09□□□□□ -0.79
SLC46A1-201ENST00000578217 ZNF384Q8TF68 577 aa10.09□□□□□ -0.79
SLC46A1-201ENST00000578217 ATXN2LQ8WWM7 1075 aaKnown RBP10.09□□□□□ -0.79
SLC46A1-201ENST00000578217 RNPC3Q96LT9 517 aaKnown RBP10.09□□□□□ -0.79
SLC46A1-201ENST00000578217 APBA2Q99767 749 aa10.09□□□□□ -0.79
SLC46A1-201ENST00000578217 LRFN3Q9BTN0 628 aa10.09□□□□□ -0.79
SLC46A1-201ENST00000578217 PRDM12Q9H4Q4 367 aa10.09□□□□□ -0.79
SLC46A1-201ENST00000578217 ZNF576Q9H609 170 aa10.09□□□□□ -0.79
SLC46A1-201ENST00000578217 BICC1Q9H694 974 aaKnown RBP10.09□□□□□ -0.79
SLC46A1-201ENST00000578217 THEGQ9P2T0 379 aa10.09□□□□□ -0.79
SLC46A1-201ENST00000578217 DDX20Q9UHI6 824 aaKnown RBP10.09□□□□□ -0.79
SLC46A1-201ENST00000578217 PRRC2BQ5JSZ5 2229 aaKnown RBP10.09□□□□□ -0.79
SLC46A1-201ENST00000578217 GAKO14976 1311 aa10.08□□□□□ -0.8
SLC46A1-201ENST00000578217 MYBBP1AQ9BQG0 1328 aaKnown RBP10.08□□□□□ -0.8
SLC46A1-201ENST00000578217 PLXNA1Q9UIW2 1896 aa10.08□□□□□ -0.8
SLC46A1-201ENST00000578217 CACNA1FO60840 1977 aa10.08□□□□□ -0.8
SLC46A1-201ENST00000578217 WDFY4Q6ZS81 3184 aa10.08□□□□□ -0.8
SLC46A1-201ENST00000578217 SIPA1L1O43166 1804 aa10.08□□□□□ -0.8
SLC46A1-201ENST00000578217 CNMDO75829 334 aa10.08□□□□□ -0.8
SLC46A1-201ENST00000578217 CYP2C19P33261 490 aa10.08□□□□□ -0.8
SLC46A1-201ENST00000578217 HERVK_113P62684 666 aa10.08□□□□□ -0.8
SLC46A1-201ENST00000578217 MTMR2Q13614 643 aa10.08□□□□□ -0.8
SLC46A1-201ENST00000578217 SNX17Q15036 470 aa10.08□□□□□ -0.8
SLC46A1-201ENST00000578217 SH3D19Q5HYK7 790 aa10.08□□□□□ -0.8
SLC46A1-201ENST00000578217 GPRC5AQ8NFJ5 357 aa10.08□□□□□ -0.8
SLC46A1-201ENST00000578217 NPLOC4Q8TAT6 608 aa10.08□□□□□ -0.8
SLC46A1-201ENST00000578217 WDR66Q8TBY9 1149 aa10.08□□□□□ -0.8
SLC46A1-201ENST00000578217 SOCS4Q8WXH5 440 aa10.08□□□□□ -0.8
SLC46A1-201ENST00000578217 FERMT2Q96AC1 680 aa10.08□□□□□ -0.8
SLC46A1-201ENST00000578217 C11orf16Q9NQ32 467 aa10.08□□□□□ -0.8
SLC46A1-201ENST00000578217 PRKAG2Q9UGJ0 569 aa10.08□□□□□ -0.8
SLC46A1-201ENST00000578217 SMCHD1A6NHR9 2005 aa10.07□□□□□ -0.8
SLC46A1-201ENST00000578217 DNM1LO00429 736 aa10.07□□□□□ -0.8
SLC46A1-201ENST00000578217 SEMA3EO15041 775 aa10.07□□□□□ -0.8
SLC46A1-201ENST00000578217 VAMP4O75379 141 aa10.07□□□□□ -0.8
SLC46A1-201ENST00000578217 LDHBP07195 334 aaKnown RBP10.07□□□□□ -0.8
SLC46A1-201ENST00000578217 BMP1P13497 986 aa10.07□□□□□ -0.8
SLC46A1-201ENST00000578217 RGS2P41220 211 aa10.07□□□□□ -0.8
SLC46A1-201ENST00000578217 RHBDL3P58872 404 aa10.07□□□□□ -0.8
SLC46A1-201ENST00000578217 ERVK-9P63128 1117 aa10.07□□□□□ -0.8
SLC46A1-201ENST00000578217 ERVK-24P63145 666 aa10.07□□□□□ -0.8
SLC46A1-201ENST00000578217 MRPS5P82675 430 aaKnown RBP10.07□□□□□ -0.8
SLC46A1-201ENST00000578217 TFF2Q03403 129 aa10.07□□□□□ -0.8
SLC46A1-201ENST00000578217 TLE2Q04725 743 aa10.07□□□□□ -0.8
SLC46A1-201ENST00000578217 CALD1Q05682 793 aaKnown RBP10.07□□□□□ -0.8
SLC46A1-201ENST00000578217 RABL6Q3YEC7 729 aaPredicted RBP10.07□□□□□ -0.8
SLC46A1-201ENST00000578217 PLEKHH3Q7Z736 793 aa10.07□□□□□ -0.8
SLC46A1-201ENST00000578217 ALYREFQ86V81 257 aaKnown RBP10.07□□□□□ -0.8
SLC46A1-201ENST00000578217 ZNF454Q8N9F8 522 aa10.07□□□□□ -0.8
SLC46A1-201ENST00000578217 LPAR1Q92633 364 aa10.07□□□□□ -0.8
SLC46A1-201ENST00000578217 DDX12PQ92771 950 aa10.07□□□□□ -0.8
SLC46A1-201ENST00000578217 PAGR1Q9BTK6 254 aa10.07□□□□□ -0.8
SLC46A1-201ENST00000578217 CNGA1P29973 690 aa10.06□□□□□ -0.8
SLC46A1-201ENST00000578217 MAPK4P31152 587 aa10.06□□□□□ -0.8
SLC46A1-201ENST00000578217 HOXA7P31268 230 aaPredicted RBP10.06□□□□□ -0.8
SLC46A1-201ENST00000578217 CAP2P40123 477 aa10.06□□□□□ -0.8
SLC46A1-201ENST00000578217 ADCYAP1R1P41586 468 aa10.06□□□□□ -0.8
SLC46A1-201ENST00000578217 MLLT3P42568 568 aaPredicted RBP10.06□□□□□ -0.8
SLC46A1-201ENST00000578217 PHKA1P46020 1223 aa10.06□□□□□ -0.8
SLC46A1-201ENST00000578217 KCNQ1P51787 676 aa10.06□□□□□ -0.8
SLC46A1-201ENST00000578217 IRX3P78415 501 aaPredicted RBP10.06□□□□□ -0.8
SLC46A1-201ENST00000578217 MAP2K5Q13163 448 aa10.06□□□□□ -0.8
SLC46A1-201ENST00000578217 PUM3Q15397 648 aaKnown RBP10.06□□□□□ -0.8
SLC46A1-201ENST00000578217 TRMT44Q8IYL2 757 aaKnown RBP10.06□□□□□ -0.8
SLC46A1-201ENST00000578217 RNF166Q96A37 237 aaPredicted RBP10.06□□□□□ -0.8
SLC46A1-201ENST00000578217 TIFAQ96CG3 184 aa10.06□□□□□ -0.8
SLC46A1-201ENST00000578217 CHMP4AQ9BY43 222 aa10.06□□□□□ -0.8
SLC46A1-201ENST00000578217 XPO5Q9HAV4 1204 aaKnown RBP eCLIP10.06□□□□□ -0.8
SLC46A1-201ENST00000578217 C9orf78Q9NZ63 289 aaPredicted RBP10.06□□□□□ -0.8
SLC46A1-201ENST00000578217 KIF16BQ96L93 1317 aa10.06□□□□□ -0.8
SLC46A1-201ENST00000578217 FAM86C2PA6NEL3 165 aa10.05□□□□□ -0.8
SLC46A1-201ENST00000578217 USP17L5A8MUK1 530 aa10.05□□□□□ -0.8
SLC46A1-201ENST00000578217 IFIT1P09914 478 aaKnown RBP10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms