RNA–Protein interactions for RNA: ENST00000578009.5

IFT20-205, Transcript of intraflagellar transport 20, humanhuman

TSL 3

Gene IFT20, Length 611 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-205ENST00000578009 PRDM7Q9NQW5 492 aa6.6□□□□□ -1.35
IFT20-205ENST00000578009 PLAGL2Q9UPG8 496 aa6.6□□□□□ -1.35
IFT20-205ENST00000578009 GTF3C3Q9Y5Q9 886 aa6.6□□□□□ -1.35
IFT20-205ENST00000578009 TRPM1Q7Z4N2 1603 aa6.6□□□□□ -1.35
IFT20-205ENST00000578009 FRMPD1Q5SYB0 1578 aa6.6□□□□□ -1.35
IFT20-205ENST00000578009 ZMYM4Q5VZL5 1548 aa6.6□□□□□ -1.35
IFT20-205ENST00000578009 MYOM2P54296 1465 aa6.6□□□□□ -1.35
IFT20-205ENST00000578009 SPHKAPQ2M3C7 1700 aa6.59□□□□□ -1.35
IFT20-205ENST00000578009 PTPN12Q05209 780 aaKnown RBP6.59□□□□□ -1.35
IFT20-205ENST00000578009 KCNMB1Q16558 191 aa6.59□□□□□ -1.35
IFT20-205ENST00000578009 MLANAQ16655 118 aa6.59□□□□□ -1.35
IFT20-205ENST00000578009 ZSWIM9Q86XI8 627 aa6.59□□□□□ -1.35
IFT20-205ENST00000578009 TOP6BLQ8N6T0 577 aa6.59□□□□□ -1.35
IFT20-205ENST00000578009 TESK2Q96S53 571 aa6.59□□□□□ -1.35
IFT20-205ENST00000578009 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP6.59□□□□□ -1.35
IFT20-205ENST00000578009 PCOLCE2Q9UKZ9 415 aa6.59□□□□□ -1.35
IFT20-205ENST00000578009 BRPF3Q9ULD4 1205 aa6.59□□□□□ -1.35
IFT20-205ENST00000578009 NOS1P29475 1434 aa6.59□□□□□ -1.36
IFT20-205ENST00000578009 DIP2BQ9P265 1576 aa6.58□□□□□ -1.36
IFT20-205ENST00000578009 DIP2CQ9Y2E4 1556 aa6.58□□□□□ -1.36
IFT20-205ENST00000578009 RAP1GAPP47736 663 aa6.58□□□□□ -1.36
IFT20-205ENST00000578009 HNRNPUQ00839 825 aaKnown RBP eCLIP6.58□□□□□ -1.36
IFT20-205ENST00000578009 ORC1Q13415 861 aa6.58□□□□□ -1.36
IFT20-205ENST00000578009 KIF4BQ2VIQ3 1234 aa6.58□□□□□ -1.36
IFT20-205ENST00000578009 KRTAP19-4Q3LI73 84 aa6.58□□□□□ -1.36
IFT20-205ENST00000578009 FLAD1Q8NFF5 587 aa6.58□□□□□ -1.36
IFT20-205ENST00000578009 ABCB6Q9NP58 842 aa6.58□□□□□ -1.36
IFT20-205ENST00000578009 FAM53CQ9NYF3 392 aa6.58□□□□□ -1.36
IFT20-205ENST00000578009 NRXN1Q9ULB1 1477 aa6.58□□□□□ -1.36
IFT20-205ENST00000578009 NPATQ14207 1427 aa6.58□□□□□ -1.36
IFT20-205ENST00000578009 CLTCL1P53675 1640 aa6.58□□□□□ -1.36
IFT20-205ENST00000578009 ABCA6Q8N139 1617 aa6.58□□□□□ -1.36
IFT20-205ENST00000578009 REREQ9P2R6 1566 aa6.57□□□□□ -1.36
IFT20-205ENST00000578009 ABCC3O15438 1527 aa6.57□□□□□ -1.36
IFT20-205ENST00000578009 AGLP35573 1532 aa6.57□□□□□ -1.36
IFT20-205ENST00000578009 CEP152O94986 1710 aa6.57□□□□□ -1.36
IFT20-205ENST00000578009 RICTORQ6R327 1708 aa6.57□□□□□ -1.36
IFT20-205ENST00000578009 CPNE3O75131 537 aaKnown RBP6.57□□□□□ -1.36
IFT20-205ENST00000578009 GADD45BO75293 160 aaPredicted RBP6.57□□□□□ -1.36
IFT20-205ENST00000578009 GSTP1P09211 210 aaKnown RBP6.57□□□□□ -1.36
IFT20-205ENST00000578009 TMF1P82094 1093 aa6.57□□□□□ -1.36
IFT20-205ENST00000578009 FAAP100Q0VG06 881 aa6.57□□□□□ -1.36
IFT20-205ENST00000578009 IKZF1Q13422 519 aa6.57□□□□□ -1.36
IFT20-205ENST00000578009 RALBP1Q15311 655 aa6.57□□□□□ -1.36
IFT20-205ENST00000578009 RPS26P11Q5JNZ5 115 aaPredicted RBP6.57□□□□□ -1.36
IFT20-205ENST00000578009 PHLDB3Q6NSJ2 640 aa6.57□□□□□ -1.36
IFT20-205ENST00000578009 GGT6Q6P531 493 aa6.57□□□□□ -1.36
IFT20-205ENST00000578009 KCNB2Q92953 911 aa6.57□□□□□ -1.36
IFT20-205ENST00000578009 TOX2Q96NM4 488 aa6.57□□□□□ -1.36
IFT20-205ENST00000578009 SLC52A1Q9NWF4 448 aa6.57□□□□□ -1.36
IFT20-205ENST00000578009 KIAA1210Q9ULL0 1709 aa6.56□□□□□ -1.36
IFT20-205ENST00000578009 PPRC1Q5VV67 1664 aaKnown RBP6.56□□□□□ -1.36
IFT20-205ENST00000578009 SCAF11Q99590 1463 aaKnown RBP6.56□□□□□ -1.36
IFT20-205ENST00000578009 TMEM238LA0A1B0GVL6 79 aa6.56□□□□□ -1.36
IFT20-205ENST00000578009 ZNF503-AS2A6NEH8 195 aa6.56□□□□□ -1.36
IFT20-205ENST00000578009 ZNF865P0CJ78 1059 aaPredicted RBP6.56□□□□□ -1.36
IFT20-205ENST00000578009 PHF6Q8IWS0 365 aaKnown RBP eCLIP6.56□□□□□ -1.36
IFT20-205ENST00000578009 BHLHE22Q8NFJ8 381 aaPredicted RBP6.56□□□□□ -1.36
IFT20-205ENST00000578009 ISL2Q96A47 359 aa6.56□□□□□ -1.36
IFT20-205ENST00000578009 KRT82Q9NSB4 513 aa6.56□□□□□ -1.36
IFT20-205ENST00000578009 PCDHGC5Q9Y5F6 944 aa6.56□□□□□ -1.36
IFT20-205ENST00000578009 MADDQ8WXG6 1647 aa6.56□□□□□ -1.36
IFT20-205ENST00000578009 ZFYVE9O95405 1425 aa6.56□□□□□ -1.36
IFT20-205ENST00000578009 EIF3AQ14152 1382 aaKnown RBP6.56□□□□□ -1.36
IFT20-205ENST00000578009 ADGRB3O60242 1522 aa6.55□□□□□ -1.36
IFT20-205ENST00000578009 CARNS1A5YM72 827 aa6.55□□□□□ -1.36
IFT20-205ENST00000578009 KRTAP9-7A8MTY7 169 aa6.55□□□□□ -1.36
IFT20-205ENST00000578009 NEFMP07197 916 aa6.55□□□□□ -1.36
IFT20-205ENST00000578009 ZP2Q05996 745 aa6.55□□□□□ -1.36
IFT20-205ENST00000578009 ASB11Q8WXH4 323 aa6.55□□□□□ -1.36
IFT20-205ENST00000578009 CCDC74AQ96AQ1 378 aa6.55□□□□□ -1.36
IFT20-205ENST00000578009 LIN37Q96GY3 246 aaPredicted RBP6.55□□□□□ -1.36
IFT20-205ENST00000578009 C14orf93Q9H972 538 aaKnown RBP6.55□□□□□ -1.36
IFT20-205ENST00000578009 SNX11Q9Y5W9 270 aa6.55□□□□□ -1.36
IFT20-205ENST00000578009 YEATS2Q9ULM3 1422 aa6.55□□□□□ -1.36
IFT20-205ENST00000578009 SBNO2Q9Y2G9 1366 aa6.55□□□□□ -1.36
IFT20-205ENST00000578009 ZC3H13Q5T200 1668 aaKnown RBP6.55□□□□□ -1.36
IFT20-205ENST00000578009 CFPP27918 469 aa6.54□□□□□ -1.36
IFT20-205ENST00000578009 PRPF40BQ6NWY9 871 aaKnown RBP6.54□□□□□ -1.36
IFT20-205ENST00000578009 ZSCAN18Q8TBC5 510 aaPredicted RBP6.54□□□□□ -1.36
IFT20-205ENST00000578009 HEXIM2Q96MH2 286 aaKnown RBP6.54□□□□□ -1.36
IFT20-205ENST00000578009 PUS7Q96PZ0 661 aaKnown RBP6.54□□□□□ -1.36
IFT20-205ENST00000578009 TNKS2Q9H2K2 1166 aa6.54□□□□□ -1.36
IFT20-205ENST00000578009 GPN3Q9UHW5 284 aaPredicted RBP6.54□□□□□ -1.36
IFT20-205ENST00000578009 ADGRF5Q8IZF2 1346 aa6.53□□□□□ -1.36
IFT20-205ENST00000578009 H3BRB1 525 aa6.53□□□□□ -1.36
IFT20-205ENST00000578009 NDUFB5O43674 189 aa6.53□□□□□ -1.36
IFT20-205ENST00000578009 ICMTO60725 284 aa6.53□□□□□ -1.36
IFT20-205ENST00000578009 PPP2R3AQ06190 1150 aa6.53□□□□□ -1.36
IFT20-205ENST00000578009 PDE3BQ13370 1112 aa6.53□□□□□ -1.36
IFT20-205ENST00000578009 LCE5AQ5TCM9 118 aa6.53□□□□□ -1.36
IFT20-205ENST00000578009 CILP2Q8IUL8 1156 aa6.53□□□□□ -1.36
IFT20-205ENST00000578009 PPP1R16BQ96T49 567 aa6.53□□□□□ -1.36
IFT20-205ENST00000578009 TUT1Q9H6E5 874 aaKnown RBP6.53□□□□□ -1.36
IFT20-205ENST00000578009 MRS2Q9HD23 443 aa6.53□□□□□ -1.36
IFT20-205ENST00000578009 TRAK1Q9UPV9 953 aa6.53□□□□□ -1.36
IFT20-205ENST00000578009 CTNND2Q9UQB3 1225 aa6.53□□□□□ -1.36
IFT20-205ENST00000578009 BRD4O60885 1362 aaPredicted RBP6.53□□□□□ -1.36
IFT20-205ENST00000578009 INSRP06213 1382 aa6.53□□□□□ -1.36
IFT20-205ENST00000578009 NPC1L1Q9UHC9 1359 aa6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms