RNA–Protein interactions for RNA: ENST00000575313.1

CLDN7-208, Transcript of claudin 7, humanhuman

TSL 3

Gene CLDN7, Length 605 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN7-208ENST00000575313 SEPT2Q15019 361 aa21.18■□□□□ 0.98
CLDN7-208ENST00000575313 SH3D19Q5HYK7 790 aa21.18■□□□□ 0.98
CLDN7-208ENST00000575313 PROCA1Q8NCQ7 364 aaPredicted RBP21.18■□□□□ 0.98
CLDN7-208ENST00000575313 EPB41L2O43491 1005 aaKnown RBP21.17■□□□□ 0.98
CLDN7-208ENST00000575313 GUCY1A2P33402 732 aa21.17■□□□□ 0.98
CLDN7-208ENST00000575313 CTDSPL2Q05D32 466 aa21.17■□□□□ 0.98
CLDN7-208ENST00000575313 MTMR2Q13614 643 aa21.17■□□□□ 0.98
CLDN7-208ENST00000575313 GADL1Q6ZQY3 521 aa21.17■□□□□ 0.98
CLDN7-208ENST00000575313 FAM43AQ8N2R8 423 aa21.17■□□□□ 0.98
CLDN7-208ENST00000575313 RBM8AQ9Y5S9 174 aaKnown RBP21.17■□□□□ 0.98
CLDN7-208ENST00000575313 U3KPZ7 1027 aaPredicted RBP21.17■□□□□ 0.98
CLDN7-208ENST00000575313 ZNF213O14771 459 aa21.16■□□□□ 0.98
CLDN7-208ENST00000575313 PRDM1O75626 825 aa21.16■□□□□ 0.98
CLDN7-208ENST00000575313 HSPA8P11142 646 aaKnown RBP21.16■□□□□ 0.98
CLDN7-208ENST00000575313 PCP11498 1178 aaKnown RBP21.16■□□□□ 0.98
CLDN7-208ENST00000575313 HMGCS2P54868 508 aa21.16■□□□□ 0.98
CLDN7-208ENST00000575313 FEZ1Q99689 392 aa21.16■□□□□ 0.98
CLDN7-208ENST00000575313 KANSL2Q9H9L4 492 aa21.16■□□□□ 0.98
CLDN7-208ENST00000575313 TMOD4Q9NZQ9 345 aa21.16■□□□□ 0.98
CLDN7-208ENST00000575313 DDX52Q9Y2R4 599 aaKnown RBP eCLIP21.16■□□□□ 0.98
CLDN7-208ENST00000575313 SLC45A1Q9Y2W3 748 aa21.16■□□□□ 0.98
CLDN7-208ENST00000575313 ORC4O43929 436 aa21.15■□□□□ 0.98
CLDN7-208ENST00000575313 FGRP09769 529 aa21.15■□□□□ 0.98
CLDN7-208ENST00000575313 USP14P54578 494 aa21.15■□□□□ 0.98
CLDN7-208ENST00000575313 ICA1Q05084 483 aa21.15■□□□□ 0.98
CLDN7-208ENST00000575313 IMMTQ16891 758 aaKnown RBP21.15■□□□□ 0.98
CLDN7-208ENST00000575313 KIAA1683Q9H0B3 1180 aa21.15■□□□□ 0.98
CLDN7-208ENST00000575313 RNF41Q9H4P4 317 aaPredicted RBP21.15■□□□□ 0.98
CLDN7-208ENST00000575313 SH2D4AQ9H788 454 aa21.15■□□□□ 0.98
CLDN7-208ENST00000575313 UPF2Q9HAU5 1272 aaKnown RBP21.15■□□□□ 0.98
CLDN7-208ENST00000575313 ARHGEF10LQ9HCE6 1279 aa21.15■□□□□ 0.98
CLDN7-208ENST00000575313 AGTPBP1Q9UPW5 1226 aa21.15■□□□□ 0.98
CLDN7-208ENST00000575313 PTPRFP10586 1907 aa21.15■□□□□ 0.98
CLDN7-208ENST00000575313 PDHXO00330 501 aa21.14■□□□□ 0.97
CLDN7-208ENST00000575313 TBC1D8O95759 1140 aa21.14■□□□□ 0.97
CLDN7-208ENST00000575313 HAND2P61296 217 aa21.14■□□□□ 0.97
CLDN7-208ENST00000575313 PABPC4Q13310 644 aaKnown RBP eCLIP21.14■□□□□ 0.97
CLDN7-208ENST00000575313 NECTIN1Q15223 517 aa21.14■□□□□ 0.97
CLDN7-208ENST00000575313 TAF1CQ15572 869 aaPredicted RBP21.14■□□□□ 0.97
CLDN7-208ENST00000575313 GPAT2Q6NUI2 795 aa21.14■□□□□ 0.97
CLDN7-208ENST00000575313 USP17L2Q6R6M4 530 aa21.14■□□□□ 0.97
CLDN7-208ENST00000575313 ZFYVE28Q9HCC9 887 aa21.14■□□□□ 0.97
CLDN7-208ENST00000575313 TSKSQ9UJT2 592 aa21.14■□□□□ 0.97
CLDN7-208ENST00000575313 PLIN4Q96Q06 1357 aa21.13■□□□□ 0.97
CLDN7-208ENST00000575313 TSPY3P0CV98 308 aa21.13■□□□□ 0.97
CLDN7-208ENST00000575313 TSPY8P0CW00 308 aa21.13■□□□□ 0.97
CLDN7-208ENST00000575313 NT5C2P49902 561 aa21.13■□□□□ 0.97
CLDN7-208ENST00000575313 CRHR2Q13324 411 aa21.13■□□□□ 0.97
CLDN7-208ENST00000575313 NOM1Q5C9Z4 860 aaKnown RBP21.13■□□□□ 0.97
CLDN7-208ENST00000575313 AKNAD1Q5T1N1 836 aa21.13■□□□□ 0.97
CLDN7-208ENST00000575313 MFSD6Q6ZSS7 791 aa21.13■□□□□ 0.97
CLDN7-208ENST00000575313 NEDD1Q8NHV4 660 aa21.13■□□□□ 0.97
CLDN7-208ENST00000575313 ACER1Q8TDN7 264 aa21.13■□□□□ 0.97
CLDN7-208ENST00000575313 STAG1Q8WVM7 1258 aa21.13■□□□□ 0.97
CLDN7-208ENST00000575313 C12orf42Q96LP6 360 aa21.13■□□□□ 0.97
CLDN7-208ENST00000575313 GNL3Q9BVP2 549 aaKnown RBP eCLIP21.13■□□□□ 0.97
CLDN7-208ENST00000575313 LOC285556D6RIA3 1793 aa21.13■□□□□ 0.97
CLDN7-208ENST00000575313 LBX1P52954 281 aa21.12■□□□□ 0.97
CLDN7-208ENST00000575313 TFAP4Q01664 338 aa21.12■□□□□ 0.97
CLDN7-208ENST00000575313 PPP4R3BQ5MIZ7 849 aa21.12■□□□□ 0.97
CLDN7-208ENST00000575313 PARK7Q99497 189 aaKnown RBP21.12■□□□□ 0.97
CLDN7-208ENST00000575313 TOMM22Q9NS69 142 aa21.12■□□□□ 0.97
CLDN7-208ENST00000575313 PNMA3Q9UL41 463 aa21.12■□□□□ 0.97
CLDN7-208ENST00000575313 LAMA4Q16363 1823 aa21.11■□□□□ 0.97
CLDN7-208ENST00000575313 TSPY2A6NKD2 308 aa21.11■□□□□ 0.97
CLDN7-208ENST00000575313 MCCP23508 829 aa21.11■□□□□ 0.97
CLDN7-208ENST00000575313 HSPA4P34932 840 aa21.11■□□□□ 0.97
CLDN7-208ENST00000575313 TREML2Q5T2D2 321 aa21.11■□□□□ 0.97
CLDN7-208ENST00000575313 CREB3L3Q68CJ9 461 aa21.11■□□□□ 0.97
CLDN7-208ENST00000575313 TBC1D10CQ8IV04 446 aa21.11■□□□□ 0.97
CLDN7-208ENST00000575313 NBPF3Q9H094 633 aa21.11■□□□□ 0.97
CLDN7-208ENST00000575313 PRDM10Q9NQV6 1147 aa21.11■□□□□ 0.97
CLDN7-208ENST00000575313 EMILIN3Q9NT22 766 aa21.11■□□□□ 0.97
CLDN7-208ENST00000575313 TMX2Q9Y320 296 aa21.11■□□□□ 0.97
CLDN7-208ENST00000575313 GREB1LQ9C091 1923 aaPredicted RBP21.11■□□□□ 0.97
CLDN7-208ENST00000575313 IGKV6D-41A0A0C4DH26 115 aa21.1■□□□□ 0.97
CLDN7-208ENST00000575313 A0A1W2PRG0 241 aa21.1■□□□□ 0.97
CLDN7-208ENST00000575313 SLC27A2O14975 620 aa21.1■□□□□ 0.97
CLDN7-208ENST00000575313 RANBP6O60518 1105 aaKnown RBP21.1■□□□□ 0.97
CLDN7-208ENST00000575313 EEF2P13639 858 aaKnown RBP21.1■□□□□ 0.97
CLDN7-208ENST00000575313 ATP2B2Q01814 1243 aa21.1■□□□□ 0.97
CLDN7-208ENST00000575313 ZYXQ15942 572 aaKnown RBP21.1■□□□□ 0.97
CLDN7-208ENST00000575313 FAM47AQ5JRC9 791 aa21.1■□□□□ 0.97
CLDN7-208ENST00000575313 CLEC10AQ8IUN9 316 aa21.1■□□□□ 0.97
CLDN7-208ENST00000575313 SIAH1Q8IUQ4 282 aa21.1■□□□□ 0.97
CLDN7-208ENST00000575313 C22orf23Q9BZE7 217 aa21.1■□□□□ 0.97
CLDN7-208ENST00000575313 INCENPQ9NQS7 918 aa21.1■□□□□ 0.97
CLDN7-208ENST00000575313 NYAP2Q9P242 653 aa21.1■□□□□ 0.97
CLDN7-208ENST00000575313 GPR25O00155 361 aa21.09■□□□□ 0.97
CLDN7-208ENST00000575313 TLR2O60603 784 aa21.09■□□□□ 0.97
CLDN7-208ENST00000575313 CYP21A2P08686 494 aa21.09■□□□□ 0.97
CLDN7-208ENST00000575313 HOXA7P31268 230 aaPredicted RBP21.09■□□□□ 0.97
CLDN7-208ENST00000575313 DGKZQ13574 1117 aa21.09■□□□□ 0.97
CLDN7-208ENST00000575313 RRP12Q5JTH9 1297 aaKnown RBP21.09■□□□□ 0.97
CLDN7-208ENST00000575313 RNF20Q5VTR2 975 aa21.09■□□□□ 0.97
CLDN7-208ENST00000575313 LPAR1Q92633 364 aa21.09■□□□□ 0.97
CLDN7-208ENST00000575313 CEP95Q96GE4 821 aa21.09■□□□□ 0.97
CLDN7-208ENST00000575313 MTMR4Q9NYA4 1195 aa21.09■□□□□ 0.97
CLDN7-208ENST00000575313 TACC3Q9Y6A5 838 aa21.09■□□□□ 0.97
CLDN7-208ENST00000575313 TTLL1O95922 423 aa21.08■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms