RNA–Protein interactions for RNA: ENST00000575176.5

SMG6-216, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 557 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-216ENST00000575176 LACTBP83111 547 aaPredicted RBP10.43□□□□□ -0.74
SMG6-216ENST00000575176 NMIQ13287 307 aaPredicted RBP10.43□□□□□ -0.74
SMG6-216ENST00000575176 SEPT2Q15019 361 aa10.43□□□□□ -0.74
SMG6-216ENST00000575176 TICAM2Q86XR7 235 aa10.43□□□□□ -0.74
SMG6-216ENST00000575176 CRACR2BQ8N4Y2 399 aaPredicted RBP10.43□□□□□ -0.74
SMG6-216ENST00000575176 KIAA1683Q9H0B3 1180 aa10.43□□□□□ -0.74
SMG6-216ENST00000575176 ALPK3Q96L96 1907 aa10.43□□□□□ -0.74
SMG6-216ENST00000575176 KIAA0100Q14667 2235 aaKnown RBP10.42□□□□□ -0.74
SMG6-216ENST00000575176 PEX10O60683 326 aa10.42□□□□□ -0.74
SMG6-216ENST00000575176 HOXA7P31268 230 aaPredicted RBP10.42□□□□□ -0.74
SMG6-216ENST00000575176 SP3Q02447 781 aa10.42□□□□□ -0.74
SMG6-216ENST00000575176 ABCB5Q2M3G0 1257 aa10.42□□□□□ -0.74
SMG6-216ENST00000575176 CERKLQ49MI3 558 aaPredicted RBP10.42□□□□□ -0.74
SMG6-216ENST00000575176 TTC22Q5TAA0 569 aa10.42□□□□□ -0.74
SMG6-216ENST00000575176 IFNL3Q8IZI9 196 aa10.42□□□□□ -0.74
SMG6-216ENST00000575176 TRIM47Q96LD4 638 aa10.42□□□□□ -0.74
SMG6-216ENST00000575176 ZFYVE28Q9HCC9 887 aa10.42□□□□□ -0.74
SMG6-216ENST00000575176 TXNRD2Q9NNW7 524 aa10.42□□□□□ -0.74
SMG6-216ENST00000575176 SWAP70Q9UH65 585 aa10.42□□□□□ -0.74
SMG6-216ENST00000575176 CPA4Q9UI42 421 aa10.42□□□□□ -0.74
SMG6-216ENST00000575176 ZNFX1Q9P2E3 1918 aaKnown RBP10.42□□□□□ -0.74
SMG6-216ENST00000575176 SMCHD1A6NHR9 2005 aa10.41□□□□□ -0.74
SMG6-216ENST00000575176 CNMDO75829 334 aa10.41□□□□□ -0.74
SMG6-216ENST00000575176 POLR3DP05423 398 aaPredicted RBP10.41□□□□□ -0.74
SMG6-216ENST00000575176 FGRP09769 529 aa10.41□□□□□ -0.74
SMG6-216ENST00000575176 VCAM1P19320 739 aa10.41□□□□□ -0.74
SMG6-216ENST00000575176 OTUD7BQ6GQQ9 843 aa10.41□□□□□ -0.74
SMG6-216ENST00000575176 GADL1Q6ZQY3 521 aa10.41□□□□□ -0.74
SMG6-216ENST00000575176 FASTKD5Q7L8L6 764 aaKnown RBP10.41□□□□□ -0.74
SMG6-216ENST00000575176 PARK7Q99497 189 aaKnown RBP10.41□□□□□ -0.74
SMG6-216ENST00000575176 ASCC2Q9H1I8 757 aaPredicted RBP10.41□□□□□ -0.74
SMG6-216ENST00000575176 MORF4L1Q9UBU8 362 aa10.41□□□□□ -0.74
SMG6-216ENST00000575176 HPS5Q9UPZ3 1129 aa10.41□□□□□ -0.74
SMG6-216ENST00000575176 DNAH12Q6ZR08 3092 aa10.41□□□□□ -0.74
SMG6-216ENST00000575176 CCDC171Q6TFL3 1326 aa10.4□□□□□ -0.74
SMG6-216ENST00000575176 PATL2C9JE40 543 aaKnown RBP10.4□□□□□ -0.74
SMG6-216ENST00000575176 USP17L10C9JJH3 530 aa10.4□□□□□ -0.74
SMG6-216ENST00000575176 GNAT2P19087 354 aa10.4□□□□□ -0.74
SMG6-216ENST00000575176 SDSP20132 328 aa10.4□□□□□ -0.74
SMG6-216ENST00000575176 NOVP48745 357 aa10.4□□□□□ -0.74
SMG6-216ENST00000575176 ALX1Q15699 326 aa10.4□□□□□ -0.74
SMG6-216ENST00000575176 FAM110CQ1W6H9 321 aa10.4□□□□□ -0.74
SMG6-216ENST00000575176 FBXO46Q6PJ61 603 aaPredicted RBP10.4□□□□□ -0.74
SMG6-216ENST00000575176 TMEM179Q6ZVK1 233 aa10.4□□□□□ -0.74
SMG6-216ENST00000575176 ERO1AQ96HE7 468 aa10.4□□□□□ -0.74
SMG6-216ENST00000575176 AS3MTQ9HBK9 375 aa10.4□□□□□ -0.74
SMG6-216ENST00000575176 HELLSQ9NRZ9 838 aa10.4□□□□□ -0.74
SMG6-216ENST00000575176 ANAPC4Q9UJX5 808 aa10.4□□□□□ -0.74
SMG6-216ENST00000575176 PTPN22Q9Y2R2 807 aa10.4□□□□□ -0.74
SMG6-216ENST00000575176 C19orf81C9J6K1 198 aa10.39□□□□□ -0.75
SMG6-216ENST00000575176 HSPD1P10809 573 aaKnown RBP10.39□□□□□ -0.75
SMG6-216ENST00000575176 PPARAQ07869 468 aa10.39□□□□□ -0.75
SMG6-216ENST00000575176 RAB3GAP1Q15042 981 aa10.39□□□□□ -0.75
SMG6-216ENST00000575176 LBX2Q6XYB7 198 aa10.39□□□□□ -0.75
SMG6-216ENST00000575176 TBC1D10CQ8IV04 446 aa10.39□□□□□ -0.75
SMG6-216ENST00000575176 ARMC5Q96C12 935 aa10.39□□□□□ -0.75
SMG6-216ENST00000575176 INCENPQ9NQS7 918 aa10.39□□□□□ -0.75
SMG6-216ENST00000575176 TMX2Q9Y320 296 aa10.39□□□□□ -0.75
SMG6-216ENST00000575176 TRIM17Q9Y577 477 aa10.39□□□□□ -0.75
SMG6-216ENST00000575176 PTCH2Q9Y6C5 1203 aa10.39□□□□□ -0.75
SMG6-216ENST00000575176 RANBP2P49792 3224 aaKnown RBP10.38□□□□□ -0.75
SMG6-216ENST00000575176 PDE4DIPQ5VU43 2346 aa10.38□□□□□ -0.75
SMG6-216ENST00000575176 SPDYE16A6NNV3 312 aaPredicted RBP10.38□□□□□ -0.75
SMG6-216ENST00000575176 PRDM1O75626 825 aa10.38□□□□□ -0.75
SMG6-216ENST00000575176 OSBPP22059 807 aa10.38□□□□□ -0.75
SMG6-216ENST00000575176 HERVK_113P62684 666 aa10.38□□□□□ -0.75
SMG6-216ENST00000575176 ICA1Q05084 483 aa10.38□□□□□ -0.75
SMG6-216ENST00000575176 MCMDC2Q4G0Z9 681 aa10.38□□□□□ -0.75
SMG6-216ENST00000575176 USP17L2Q6R6M4 530 aa10.38□□□□□ -0.75
SMG6-216ENST00000575176 RASGRP2Q7LDG7 609 aa10.38□□□□□ -0.75
SMG6-216ENST00000575176 CCDC17Q96LX7 622 aa10.38□□□□□ -0.75
SMG6-216ENST00000575176 P2RX7Q99572 595 aaKnown RBP10.38□□□□□ -0.75
SMG6-216ENST00000575176 RBPJLQ9UBG7 517 aa10.38□□□□□ -0.75
SMG6-216ENST00000575176 IGHA2P01877 340 aa10.37□□□□□ -0.75
SMG6-216ENST00000575176 FGAP02671 866 aa10.37□□□□□ -0.75
SMG6-216ENST00000575176 EEF2P13639 858 aaKnown RBP10.37□□□□□ -0.75
SMG6-216ENST00000575176 TDO2P48775 406 aa10.37□□□□□ -0.75
SMG6-216ENST00000575176 PRKCZQ05513 592 aa10.37□□□□□ -0.75
SMG6-216ENST00000575176 ZYXQ15942 572 aaKnown RBP10.37□□□□□ -0.75
SMG6-216ENST00000575176 PKN2Q16513 984 aaKnown RBP10.37□□□□□ -0.75
SMG6-216ENST00000575176 CATSPERGQ6ZRH7 1159 aa10.37□□□□□ -0.75
SMG6-216ENST00000575176 ANKRD13CQ8N6S4 541 aa10.37□□□□□ -0.75
SMG6-216ENST00000575176 REPS2Q8NFH8 660 aa10.37□□□□□ -0.75
SMG6-216ENST00000575176 CEP95Q96GE4 821 aa10.37□□□□□ -0.75
SMG6-216ENST00000575176 TRIM34Q9BYJ4 488 aa10.37□□□□□ -0.75
SMG6-216ENST00000575176 VCPKMTQ9H867 229 aa10.37□□□□□ -0.75
SMG6-216ENST00000575176 EFCC1Q9HA90 598 aa10.37□□□□□ -0.75
SMG6-216ENST00000575176 IL17RBQ9NRM6 502 aa10.37□□□□□ -0.75
SMG6-216ENST00000575176 BTBD7Q9P203 1132 aa10.37□□□□□ -0.75
SMG6-216ENST00000575176 GABRQQ9UN88 632 aa10.37□□□□□ -0.75
SMG6-216ENST00000575176 MCM3APO60318 1980 aa10.37□□□□□ -0.75
SMG6-216ENST00000575176 NEDD4P46934 1319 aa10.36□□□□□ -0.75
SMG6-216ENST00000575176 MINDY4BA8MYZ0 360 aa10.36□□□□□ -0.75
SMG6-216ENST00000575176 TRIM6-TRIM34B2RNG4 842 aa10.36□□□□□ -0.75
SMG6-216ENST00000575176 ORC4O43929 436 aa10.36□□□□□ -0.75
SMG6-216ENST00000575176 RGS19P49795 217 aa10.36□□□□□ -0.75
SMG6-216ENST00000575176 CTDSPL2Q05D32 466 aa10.36□□□□□ -0.75
SMG6-216ENST00000575176 LRRFIP1Q32MZ4 808 aaKnown RBP10.36□□□□□ -0.75
SMG6-216ENST00000575176 Q3C1V9 767 aa10.36□□□□□ -0.75
SMG6-216ENST00000575176 USP6NLQ92738 828 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms