RNA–Protein interactions for RNA: ENST00000575156.5

ERCC4-207, Transcript of ERCC excision repair 4, endonuclease catalytic subunit, humanhuman

TSL 1 (best) BASIC

Gene ERCC4, Length 2,073 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4-207ENST00000575156 NID2Q14112 1375 aa16.12■□□□□ 0.17
ERCC4-207ENST00000575156 MMP14P50281 582 aa16.12■□□□□ 0.17
ERCC4-207ENST00000575156 JAG1P78504 1218 aa16.12■□□□□ 0.17
ERCC4-207ENST00000575156 RASA3Q14644 834 aa16.12■□□□□ 0.17
ERCC4-207ENST00000575156 NFKBIBQ15653 356 aa16.12■□□□□ 0.17
ERCC4-207ENST00000575156 RASGRP2Q7LDG7 609 aa16.12■□□□□ 0.17
ERCC4-207ENST00000575156 FAM83AQ86UY5 434 aa16.12■□□□□ 0.17
ERCC4-207ENST00000575156 CCDC82Q8N4S0 544 aa16.12■□□□□ 0.17
ERCC4-207ENST00000575156 TMEM47Q9BQJ4 181 aa16.12■□□□□ 0.17
ERCC4-207ENST00000575156 KAT14Q9H8E8 782 aa16.12■□□□□ 0.17
ERCC4-207ENST00000575156 HACL1Q9UJ83 578 aa16.12■□□□□ 0.17
ERCC4-207ENST00000575156 MTMR6Q9Y217 621 aa16.12■□□□□ 0.17
ERCC4-207ENST00000575156 IGKV6D-41A0A0C4DH26 115 aa16.12■□□□□ 0.17
ERCC4-207ENST00000575156 MPHOSPH10O00566 681 aaKnown RBP16.12■□□□□ 0.17
ERCC4-207ENST00000575156 DHX16O60231 1041 aaKnown RBP16.12■□□□□ 0.17
ERCC4-207ENST00000575156 HIRAP54198 1017 aaPredicted RBP16.12■□□□□ 0.17
ERCC4-207ENST00000575156 TATDN1Q6P1N9 297 aa16.12■□□□□ 0.17
ERCC4-207ENST00000575156 TRIM34Q9BYJ4 488 aa16.12■□□□□ 0.17
ERCC4-207ENST00000575156 MTMR7Q9Y216 660 aa16.12■□□□□ 0.17
ERCC4-207ENST00000575156 PLIN4Q96Q06 1357 aa16.11■□□□□ 0.17
ERCC4-207ENST00000575156 VPS37CA5D8V6 355 aaPredicted RBP16.11■□□□□ 0.17
ERCC4-207ENST00000575156 GDF11O95390 407 aa16.11■□□□□ 0.17
ERCC4-207ENST00000575156 CERKLQ49MI3 558 aaPredicted RBP16.11■□□□□ 0.17
ERCC4-207ENST00000575156 CDC37L1Q7L3B6 337 aa16.11■□□□□ 0.17
ERCC4-207ENST00000575156 MIGA2Q7L4E1 593 aa16.11■□□□□ 0.17
ERCC4-207ENST00000575156 FAM184AQ8NB25 1140 aa16.11■□□□□ 0.17
ERCC4-207ENST00000575156 PNMA1Q8ND90 353 aa16.11■□□□□ 0.17
ERCC4-207ENST00000575156 MTMR4Q9NYA4 1195 aa16.11■□□□□ 0.17
ERCC4-207ENST00000575156 ORC3Q9UBD5 711 aaPredicted RBP16.11■□□□□ 0.17
ERCC4-207ENST00000575156 DDAH1O94760 285 aa16.1■□□□□ 0.17
ERCC4-207ENST00000575156 PLEKHA8P1O95397 391 aa16.1■□□□□ 0.17
ERCC4-207ENST00000575156 NOVP48745 357 aa16.1■□□□□ 0.17
ERCC4-207ENST00000575156 HMGN5P82970 282 aaKnown RBP16.1■□□□□ 0.17
ERCC4-207ENST00000575156 FOXD4L6Q3SYB3 417 aaPredicted RBP16.1■□□□□ 0.17
ERCC4-207ENST00000575156 FOXD4L3Q6VB84 417 aaPredicted RBP16.1■□□□□ 0.17
ERCC4-207ENST00000575156 AIFM3Q96NN9 605 aa16.1■□□□□ 0.17
ERCC4-207ENST00000575156 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.1■□□□□ 0.17
ERCC4-207ENST00000575156 GJB4Q9NTQ9 266 aa16.1■□□□□ 0.17
ERCC4-207ENST00000575156 WDR33Q9C0J8 1336 aaKnown RBP16.1■□□□□ 0.17
ERCC4-207ENST00000575156 ZSCAN22P10073 491 aaPredicted RBP16.1■□□□□ 0.17
ERCC4-207ENST00000575156 RCAN1P53805 252 aa16.1■□□□□ 0.17
ERCC4-207ENST00000575156 NBR1Q14596 966 aa16.1■□□□□ 0.17
ERCC4-207ENST00000575156 TEPSINQ96N21 525 aa16.1■□□□□ 0.17
ERCC4-207ENST00000575156 TAOK2Q9UL54 1235 aa16.1■□□□□ 0.17
ERCC4-207ENST00000575156 GUCY1B3Q02153 619 aa16.09■□□□□ 0.17
ERCC4-207ENST00000575156 CCDC178Q5BJE1 867 aa16.09■□□□□ 0.17
ERCC4-207ENST00000575156 ANGEL2Q5VTE6 544 aaKnown RBP16.09■□□□□ 0.17
ERCC4-207ENST00000575156 NBPF11Q86T75 865 aa16.09■□□□□ 0.17
ERCC4-207ENST00000575156 LRRC47Q8N1G4 583 aaKnown RBP16.09■□□□□ 0.17
ERCC4-207ENST00000575156 SLC26A6Q9BXS9 759 aa16.09■□□□□ 0.17
ERCC4-207ENST00000575156 IFNAR1P17181 557 aa16.09■□□□□ 0.17
ERCC4-207ENST00000575156 GUCY1A2P33402 732 aa16.09■□□□□ 0.17
ERCC4-207ENST00000575156 OTUD7BQ6GQQ9 843 aa16.09■□□□□ 0.17
ERCC4-207ENST00000575156 CCDC17Q96LX7 622 aa16.09■□□□□ 0.17
ERCC4-207ENST00000575156 DEFB129Q9H1M3 183 aa16.09■□□□□ 0.17
ERCC4-207ENST00000575156 CLIP2Q9UDT6 1046 aa16.09■□□□□ 0.17
ERCC4-207ENST00000575156 CALM1P0DP23 149 aa16.08■□□□□ 0.16
ERCC4-207ENST00000575156 CALM2P0DP24 149 aa16.08■□□□□ 0.16
ERCC4-207ENST00000575156 CALM3P0DP25 149 aa16.08■□□□□ 0.16
ERCC4-207ENST00000575156 PDCP20941 246 aa16.08■□□□□ 0.16
ERCC4-207ENST00000575156 FUT2Q10981 343 aa16.08■□□□□ 0.16
ERCC4-207ENST00000575156 SEPT2Q15019 361 aa16.08■□□□□ 0.16
ERCC4-207ENST00000575156 PRAMEF18Q5VWM3 479 aa16.08■□□□□ 0.16
ERCC4-207ENST00000575156 CPLX2Q6PUV4 134 aaKnown RBP16.08■□□□□ 0.16
ERCC4-207ENST00000575156 FERMT3Q86UX7 667 aa16.08■□□□□ 0.16
ERCC4-207ENST00000575156 STAG2Q8N3U4 1231 aa16.08■□□□□ 0.16
ERCC4-207ENST00000575156 GGA3Q9NZ52 723 aa16.08■□□□□ 0.16
ERCC4-207ENST00000575156 HERC5Q9UII4 1024 aaKnown RBP16.08■□□□□ 0.16
ERCC4-207ENST00000575156 MYH8P13535 1937 aa16.08■□□□□ 0.16
ERCC4-207ENST00000575156 CCDC196A0A1B0GTZ2 297 aa16.07■□□□□ 0.16
ERCC4-207ENST00000575156 hCG_1642624A0A1W2PR95 340 aa16.07■□□□□ 0.16
ERCC4-207ENST00000575156 CDKL5O76039 1030 aa16.07■□□□□ 0.16
ERCC4-207ENST00000575156 BAG4O95429 457 aaKnown RBP16.07■□□□□ 0.16
ERCC4-207ENST00000575156 GH2P01242 217 aa16.07■□□□□ 0.16
ERCC4-207ENST00000575156 TOP1P11387 765 aaKnown RBP16.07■□□□□ 0.16
ERCC4-207ENST00000575156 TNNI2P48788 182 aa16.07■□□□□ 0.16
ERCC4-207ENST00000575156 ATP2B2Q01814 1243 aa16.07■□□□□ 0.16
ERCC4-207ENST00000575156 SRBD1Q8N5C6 995 aaKnown RBP16.07■□□□□ 0.16
ERCC4-207ENST00000575156 GRIN3BO60391 1043 aa16.07■□□□□ 0.16
ERCC4-207ENST00000575156 FMNL1O95466 1100 aaPredicted RBP16.07■□□□□ 0.16
ERCC4-207ENST00000575156 F13A1P00488 732 aa16.07■□□□□ 0.16
ERCC4-207ENST00000575156 TNFAIP1Q13829 316 aa16.07■□□□□ 0.16
ERCC4-207ENST00000575156 ABCB5Q2M3G0 1257 aa16.07■□□□□ 0.16
ERCC4-207ENST00000575156 TMTC3Q6ZXV5 915 aa16.07■□□□□ 0.16
ERCC4-207ENST00000575156 SIAH1Q8IUQ4 282 aa16.07■□□□□ 0.16
ERCC4-207ENST00000575156 CTCFLQ8NI51 663 aaPredicted RBP16.07■□□□□ 0.16
ERCC4-207ENST00000575156 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.07■□□□□ 0.16
ERCC4-207ENST00000575156 GREB1LQ9C091 1923 aaPredicted RBP16.06■□□□□ 0.16
ERCC4-207ENST00000575156 TTLL1O95922 423 aa16.06■□□□□ 0.16
ERCC4-207ENST00000575156 GOLGA8HP0CJ92 632 aa16.06■□□□□ 0.16
ERCC4-207ENST00000575156 SSRP1Q08945 709 aaKnown RBP16.06■□□□□ 0.16
ERCC4-207ENST00000575156 SLC35G1Q2M3R5 365 aa16.06■□□□□ 0.16
ERCC4-207ENST00000575156 USP17L2Q6R6M4 530 aa16.06■□□□□ 0.16
ERCC4-207ENST00000575156 RBM28Q9NW13 759 aaKnown RBP16.06■□□□□ 0.16
ERCC4-207ENST00000575156 MAD2L2Q9UI95 211 aa16.06■□□□□ 0.16
ERCC4-207ENST00000575156 H3BQV1 296 aa16.06■□□□□ 0.16
ERCC4-207ENST00000575156 LMOD1P29536 600 aaPredicted RBP16.06■□□□□ 0.16
ERCC4-207ENST00000575156 MCM4P33991 863 aa16.06■□□□□ 0.16
ERCC4-207ENST00000575156 GRM4Q14833 912 aa16.06■□□□□ 0.16
ERCC4-207ENST00000575156 PPP2R5BQ15173 497 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms