RNA–Protein interactions for RNA: ENST00000573852.5

SCARF1-206, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 2,698 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-206ENST00000573852 PAGE5Q96GU1 130 aa21.71■■□□□ 1.07
SCARF1-206ENST00000573852 UBAC1Q9BSL1 405 aa21.71■■□□□ 1.07
SCARF1-206ENST00000573852 MTA3Q9BTC8 594 aa21.71■■□□□ 1.07
SCARF1-206ENST00000573852 CCDC175P0C221 793 aa21.71■■□□□ 1.07
SCARF1-206ENST00000573852 RCAN1P53805 252 aa21.71■■□□□ 1.07
SCARF1-206ENST00000573852 SEC23AQ15436 765 aa21.71■■□□□ 1.07
SCARF1-206ENST00000573852 SH3RF1Q7Z6J0 888 aa21.71■■□□□ 1.07
SCARF1-206ENST00000573852 IGSF22Q8N9C0 903 aa21.71■■□□□ 1.07
SCARF1-206ENST00000573852 ERVV-1B6SEH8 477 aa21.7■■□□□ 1.06
SCARF1-206ENST00000573852 WNT7AO00755 349 aa21.7■■□□□ 1.06
SCARF1-206ENST00000573852 PKN1Q16512 942 aa21.7■■□□□ 1.06
SCARF1-206ENST00000573852 SMYD4Q8IYR2 804 aaPredicted RBP21.7■■□□□ 1.06
SCARF1-206ENST00000573852 RABGGTAQ92696 567 aa21.7■■□□□ 1.06
SCARF1-206ENST00000573852 RNF26Q9BY78 433 aaPredicted RBP21.7■■□□□ 1.06
SCARF1-206ENST00000573852 RNF41Q9H4P4 317 aaPredicted RBP21.7■■□□□ 1.06
SCARF1-206ENST00000573852 LZTFL1Q9NQ48 299 aa21.7■■□□□ 1.06
SCARF1-206ENST00000573852 ZKSCAN7Q9P0L1 754 aaPredicted RBP21.7■■□□□ 1.06
SCARF1-206ENST00000573852 ADGRG1Q9Y653 693 aa21.7■■□□□ 1.06
SCARF1-206ENST00000573852 MINDY4BA8MYZ0 360 aa21.7■■□□□ 1.06
SCARF1-206ENST00000573852 PRDM1O75626 825 aa21.7■■□□□ 1.06
SCARF1-206ENST00000573852 PBX1P40424 430 aa21.7■■□□□ 1.06
SCARF1-206ENST00000573852 ADGRA1Q86SQ6 560 aa21.7■■□□□ 1.06
SCARF1-206ENST00000573852 SDR42E1Q8WUS8 393 aa21.7■■□□□ 1.06
SCARF1-206ENST00000573852 SYMPKQ92797 1274 aaKnown RBP21.7■■□□□ 1.06
SCARF1-206ENST00000573852 ADD3Q9UEY8 706 aaKnown RBP21.7■■□□□ 1.06
SCARF1-206ENST00000573852 TNKSO95271 1327 aa21.69■■□□□ 1.06
SCARF1-206ENST00000573852 SYNRGQ9UMZ2 1314 aa21.69■■□□□ 1.06
SCARF1-206ENST00000573852 LRP2BPQ9P2M1 347 aa21.69■■□□□ 1.06
SCARF1-206ENST00000573852 CDKAL1Q5VV42 579 aa21.69■■□□□ 1.06
SCARF1-206ENST00000573852 SUSD4Q5VX71 490 aa21.69■■□□□ 1.06
SCARF1-206ENST00000573852 ZCCHC17Q9NP64 241 aaKnown RBP21.69■■□□□ 1.06
SCARF1-206ENST00000573852 PPFIBP1Q86W92 1011 aa21.68■■□□□ 1.06
SCARF1-206ENST00000573852 GOLGA1Q92805 767 aa21.68■■□□□ 1.06
SCARF1-206ENST00000573852 PHF20Q9BVI0 1012 aa21.68■■□□□ 1.06
SCARF1-206ENST00000573852 PPP1R3GB7ZBB8 358 aa21.68■■□□□ 1.06
SCARF1-206ENST00000573852 AKAP17AQ02040 695 aaKnown RBP21.68■■□□□ 1.06
SCARF1-206ENST00000573852 FUT2Q10981 343 aa21.68■■□□□ 1.06
SCARF1-206ENST00000573852 DPYDQ12882 1025 aa21.68■■□□□ 1.06
SCARF1-206ENST00000573852 NOM1Q5C9Z4 860 aaKnown RBP21.68■■□□□ 1.06
SCARF1-206ENST00000573852 ZSWIM4Q9H7M6 989 aa21.68■■□□□ 1.06
SCARF1-206ENST00000573852 XIRP1Q702N8 1843 aaKnown RBP21.67■■□□□ 1.06
SCARF1-206ENST00000573852 ABCA3Q99758 1704 aa21.67■■□□□ 1.06
SCARF1-206ENST00000573852 BCL9O00512 1426 aa21.67■■□□□ 1.06
SCARF1-206ENST00000573852 KRT2P35908 639 aa21.67■■□□□ 1.06
SCARF1-206ENST00000573852 CT47A1Q5JQC4 288 aaPredicted RBP21.67■■□□□ 1.06
SCARF1-206ENST00000573852 CCDC34Q96HJ3 373 aa21.67■■□□□ 1.06
SCARF1-206ENST00000573852 ARFGAP3Q9NP61 516 aa21.67■■□□□ 1.06
SCARF1-206ENST00000573852 IQSEC3Q9UPP2 1182 aaPredicted RBP21.67■■□□□ 1.06
SCARF1-206ENST00000573852 CYP7A1P22680 504 aa21.67■■□□□ 1.06
SCARF1-206ENST00000573852 IL6STP40189 918 aaPredicted RBP21.66■■□□□ 1.06
SCARF1-206ENST00000573852 TXLNAP40222 546 aa21.66■■□□□ 1.06
SCARF1-206ENST00000573852 ENAHQ8N8S7 591 aaPredicted RBP21.66■■□□□ 1.06
SCARF1-206ENST00000573852 ESR2Q92731 530 aa21.66■■□□□ 1.06
SCARF1-206ENST00000573852 FUT8Q9BYC5 575 aa21.66■■□□□ 1.06
SCARF1-206ENST00000573852 V9GY48 417 aaPredicted RBP21.66■■□□□ 1.06
SCARF1-206ENST00000573852 COBLO75128 1261 aa21.66■■□□□ 1.06
SCARF1-206ENST00000573852 PLEKHA8P1O95397 391 aa21.66■■□□□ 1.06
SCARF1-206ENST00000573852 OAS2P29728 719 aaKnown RBP21.66■■□□□ 1.06
SCARF1-206ENST00000573852 SMC1AQ14683 1233 aaKnown RBP21.66■■□□□ 1.06
SCARF1-206ENST00000573852 STAMQ92783 540 aa21.66■■□□□ 1.06
SCARF1-206ENST00000573852 AK7Q96M32 723 aa21.66■■□□□ 1.06
SCARF1-206ENST00000573852 NAA15Q9BXJ9 866 aaKnown RBP21.66■■□□□ 1.06
SCARF1-206ENST00000573852 NHSL1Q5SYE7 1610 aa21.66■■□□□ 1.06
SCARF1-206ENST00000573852 MFAP3LO75121 409 aa21.65■■□□□ 1.06
SCARF1-206ENST00000573852 XBP1P17861 261 aa21.65■■□□□ 1.06
SCARF1-206ENST00000573852 CASP14P31944 242 aa21.65■■□□□ 1.06
SCARF1-206ENST00000573852 ZNF174Q15697 407 aa21.65■■□□□ 1.06
SCARF1-206ENST00000573852 GSDMAQ96QA5 445 aa21.65■■□□□ 1.06
SCARF1-206ENST00000573852 RTL9Q8NET4 1388 aa21.65■■□□□ 1.06
SCARF1-206ENST00000573852 MYH2Q9UKX2 1941 aa21.65■■□□□ 1.06
SCARF1-206ENST00000573852 ANAPC4Q9UJX5 808 aa21.65■■□□□ 1.06
SCARF1-206ENST00000573852 PLCH1Q4KWH8 1693 aa21.65■■□□□ 1.06
SCARF1-206ENST00000573852 FXR1P51114 621 aaKnown RBP eCLIP21.64■■□□□ 1.06
SCARF1-206ENST00000573852 ST5P78524 1137 aa21.64■■□□□ 1.06
SCARF1-206ENST00000573852 RASGRP2Q7LDG7 609 aa21.64■■□□□ 1.06
SCARF1-206ENST00000573852 PRPF3O43395 683 aaKnown RBP21.64■■□□□ 1.05
SCARF1-206ENST00000573852 GYPCP04921 128 aa21.64■■□□□ 1.05
SCARF1-206ENST00000573852 CHMP4BP1P59074 171 aa21.64■■□□□ 1.05
SCARF1-206ENST00000573852 PPP2R5BQ15173 497 aa21.64■■□□□ 1.05
SCARF1-206ENST00000573852 SRGAP1Q7Z6B7 1085 aa21.64■■□□□ 1.05
SCARF1-206ENST00000573852 FERMT2Q96AC1 680 aa21.64■■□□□ 1.05
SCARF1-206ENST00000573852 CTAGE1Q96RT6 745 aa21.64■■□□□ 1.05
SCARF1-206ENST00000573852 ZSCAN10Q96SZ4 725 aaPredicted RBP21.64■■□□□ 1.05
SCARF1-206ENST00000573852 PUF60Q9UHX1 559 aaKnown RBP21.64■■□□□ 1.05
SCARF1-206ENST00000573852 CYP2D7A0A087X1C5 515 aa21.63■■□□□ 1.05
SCARF1-206ENST00000573852 KIF5CO60282 957 aa21.63■■□□□ 1.05
SCARF1-206ENST00000573852 NPY5RQ15761 445 aa21.63■■□□□ 1.05
SCARF1-206ENST00000573852 LONRF2Q1L5Z9 754 aa21.63■■□□□ 1.05
SCARF1-206ENST00000573852 TNFRSF25Q93038 417 aa21.63■■□□□ 1.05
SCARF1-206ENST00000573852 CALCOCO1Q9P1Z2 691 aa21.63■■□□□ 1.05
SCARF1-206ENST00000573852 ABCF2Q9UG63 623 aa21.63■■□□□ 1.05
SCARF1-206ENST00000573852 CTNND2Q9UQB3 1225 aa21.63■■□□□ 1.05
SCARF1-206ENST00000573852 SEMA3EO15041 775 aa21.63■■□□□ 1.05
SCARF1-206ENST00000573852 FILIP1LQ4L180 1135 aa21.63■■□□□ 1.05
SCARF1-206ENST00000573852 ZNF569Q5MCW4 686 aa21.63■■□□□ 1.05
SCARF1-206ENST00000573852 SLAIN2Q9P270 581 aa21.63■■□□□ 1.05
SCARF1-206ENST00000573852 CDC23Q9UJX2 597 aa21.63■■□□□ 1.05
SCARF1-206ENST00000573852 MAGEB6P1A0A0J9YX57 407 aa21.62■■□□□ 1.05
SCARF1-206ENST00000573852 ABL1P00519 1130 aa21.62■■□□□ 1.05
SCARF1-206ENST00000573852 CCT6AP40227 531 aaKnown RBP21.62■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms