RNA–Protein interactions for RNA: ENST00000573795.5

SNF8-216, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-216ENST00000573795 RAB3GAP1Q15042 981 aa26.73■■□□□ 1.87
SNF8-216ENST00000573795 CERKLQ49MI3 558 aaPredicted RBP26.73■■□□□ 1.87
SNF8-216ENST00000573795 PLEKHH3Q7Z736 793 aa26.73■■□□□ 1.87
SNF8-216ENST00000573795 TTC6Q86TZ1 520 aa26.73■■□□□ 1.87
SNF8-216ENST00000573795 FEZ1Q99689 392 aa26.73■■□□□ 1.87
SNF8-216ENST00000573795 KIAA1683Q9H0B3 1180 aa26.73■■□□□ 1.87
SNF8-216ENST00000573795 STAP2Q9UGK3 403 aa26.73■■□□□ 1.87
SNF8-216ENST00000573795 USP17L15C9J2P7 530 aa26.72■■□□□ 1.87
SNF8-216ENST00000573795 USP17L13C9JLJ4 530 aa26.72■■□□□ 1.87
SNF8-216ENST00000573795 USP17L11C9JVI0 530 aa26.72■■□□□ 1.87
SNF8-216ENST00000573795 USP17L18D6R9N7 530 aa26.72■■□□□ 1.87
SNF8-216ENST00000573795 USP17L22D6RA61 530 aa26.72■■□□□ 1.87
SNF8-216ENST00000573795 USP17L17D6RBQ6 530 aa26.72■■□□□ 1.87
SNF8-216ENST00000573795 USP17L19D6RCP7 530 aa26.72■■□□□ 1.87
SNF8-216ENST00000573795 USP17L20D6RJB6 530 aa26.72■■□□□ 1.87
SNF8-216ENST00000573795 PDE6AP16499 860 aa26.72■■□□□ 1.87
SNF8-216ENST00000573795 VCAM1P19320 739 aa26.72■■□□□ 1.87
SNF8-216ENST00000573795 CACNB2Q08289 660 aaPredicted RBP26.72■■□□□ 1.87
SNF8-216ENST00000573795 USP17L24Q0WX57 530 aa26.72■■□□□ 1.87
SNF8-216ENST00000573795 PDE3AQ14432 1141 aa26.72■■□□□ 1.87
SNF8-216ENST00000573795 ABCB5Q2M3G0 1257 aa26.72■■□□□ 1.87
SNF8-216ENST00000573795 CATSPERGQ6ZRH7 1159 aa26.72■■□□□ 1.87
SNF8-216ENST00000573795 NBPF3Q9H094 633 aa26.72■■□□□ 1.87
SNF8-216ENST00000573795 RABGAP1Q9Y3P9 1069 aa26.72■■□□□ 1.87
SNF8-216ENST00000573795 A0A1W2PPC1 479 aa26.71■■□□□ 1.87
SNF8-216ENST00000573795 ZKSCAN1P17029 563 aaPredicted RBP26.71■■□□□ 1.87
SNF8-216ENST00000573795 RGS2P41220 211 aa26.71■■□□□ 1.87
SNF8-216ENST00000573795 SIRT2Q8IXJ6 389 aa26.71■■□□□ 1.87
SNF8-216ENST00000573795 C7orf61Q8IZ16 206 aa26.71■■□□□ 1.87
SNF8-216ENST00000573795 C11orf49Q9H6J7 331 aa26.71■■□□□ 1.87
SNF8-216ENST00000573795 PFASO15067 1338 aa26.7■■□□□ 1.87
SNF8-216ENST00000573795 MAGEB6P1A0A0J9YX57 407 aa26.7■■□□□ 1.86
SNF8-216ENST00000573795 TCRBV5S4A2TA0A5A2 114 aa26.7■■□□□ 1.86
SNF8-216ENST00000573795 SOX1O00570 391 aaPredicted RBP26.7■■□□□ 1.86
SNF8-216ENST00000573795 USP14P54578 494 aa26.7■■□□□ 1.86
SNF8-216ENST00000573795 HSP90AB4PQ58FF6 505 aa26.7■■□□□ 1.86
SNF8-216ENST00000573795 TRMT44Q8IYL2 757 aaKnown RBP26.7■■□□□ 1.86
SNF8-216ENST00000573795 APBA2Q99767 749 aa26.7■■□□□ 1.86
SNF8-216ENST00000573795 RLFQ13129 1914 aa26.69■■□□□ 1.86
SNF8-216ENST00000573795 CCND3P30281 292 aaPredicted RBP26.69■■□□□ 1.86
SNF8-216ENST00000573795 TTF1Q15361 905 aaPredicted RBP26.69■■□□□ 1.86
SNF8-216ENST00000573795 SLC9C2Q5TAH2 1124 aa26.69■■□□□ 1.86
SNF8-216ENST00000573795 LHX8Q68G74 356 aa26.69■■□□□ 1.86
SNF8-216ENST00000573795 LBX2Q6XYB7 198 aa26.69■■□□□ 1.86
SNF8-216ENST00000573795 PPIL4Q8WUA2 492 aaKnown RBP eCLIP26.69■■□□□ 1.86
SNF8-216ENST00000573795 GDF15Q99988 308 aa26.69■■□□□ 1.86
SNF8-216ENST00000573795 BTBD7Q9P203 1132 aa26.69■■□□□ 1.86
SNF8-216ENST00000573795 ZNF532Q9HCE3 1301 aa26.68■■□□□ 1.86
SNF8-216ENST00000573795 A0A0G2JMZ2 1700 aa26.68■■□□□ 1.86
SNF8-216ENST00000573795 ZMYND8Q9ULU4 1186 aaPredicted RBP26.68■■□□□ 1.86
SNF8-216ENST00000573795 SPDYE16A6NNV3 312 aaPredicted RBP26.67■■□□□ 1.86
SNF8-216ENST00000573795 APBB1O00213 710 aa26.67■■□□□ 1.86
SNF8-216ENST00000573795 GOLIM4O00461 696 aa26.67■■□□□ 1.86
SNF8-216ENST00000573795 MAP2K5Q13163 448 aa26.67■■□□□ 1.86
SNF8-216ENST00000573795 SEPT2Q15019 361 aa26.67■■□□□ 1.86
SNF8-216ENST00000573795 CCAR1Q8IX12 1150 aaKnown RBP26.67■■□□□ 1.86
SNF8-216ENST00000573795 LCORLQ8N3X6 602 aa26.67■■□□□ 1.86
SNF8-216ENST00000573795 KIF1BPQ96EK5 621 aa26.67■■□□□ 1.86
SNF8-216ENST00000573795 EDC3Q96F86 508 aaKnown RBP26.67■■□□□ 1.86
SNF8-216ENST00000573795 CABP5Q9NP86 173 aa26.67■■□□□ 1.86
SNF8-216ENST00000573795 FLRT1Q9NZU1 646 aa26.67■■□□□ 1.86
SNF8-216ENST00000573795 DNAH12Q6ZR08 3092 aa26.67■■□□□ 1.86
SNF8-216ENST00000573795 A0A1W2PRG0 241 aa26.66■■□□□ 1.86
SNF8-216ENST00000573795 POLR3DP05423 398 aaPredicted RBP26.66■■□□□ 1.86
SNF8-216ENST00000573795 COL6A1P12109 1028 aa26.66■■□□□ 1.86
SNF8-216ENST00000573795 CLASRPQ8N2M8 674 aaKnown RBP26.66■■□□□ 1.86
SNF8-216ENST00000573795 SDR42E1Q8WUS8 393 aa26.66■■□□□ 1.86
SNF8-216ENST00000573795 DNAJC2Q99543 621 aaKnown RBP26.66■■□□□ 1.86
SNF8-216ENST00000573795 CRNKL1Q9BZJ0 848 aaKnown RBP26.66■■□□□ 1.86
SNF8-216ENST00000573795 RPAP3Q9H6T3 665 aaPredicted RBP26.66■■□□□ 1.86
SNF8-216ENST00000573795 ZBTB40Q9NUA8 1239 aa26.66■■□□□ 1.86
SNF8-216ENST00000573795 MCM9Q9NXL9 1143 aa26.66■■□□□ 1.86
SNF8-216ENST00000573795 MYH8P13535 1937 aa26.66■■□□□ 1.86
SNF8-216ENST00000573795 COL6A3P12111 3177 aa26.65■■□□□ 1.86
SNF8-216ENST00000573795 BAZ2AQ9UIF9 1905 aaKnown RBP26.65■■□□□ 1.86
SNF8-216ENST00000573795 CYP2D6P10635 497 aa26.65■■□□□ 1.86
SNF8-216ENST00000573795 RPAP2Q8IXW5 612 aaPredicted RBP26.65■■□□□ 1.86
SNF8-216ENST00000573795 LRCH3Q96II8 777 aa26.65■■□□□ 1.86
SNF8-216ENST00000573795 DCP1AQ9NPI6 582 aaPredicted RBP26.65■■□□□ 1.86
SNF8-216ENST00000573795 PTPREP23469 700 aa26.64■■□□□ 1.86
SNF8-216ENST00000573795 BMP8BP34820 402 aa26.64■■□□□ 1.86
SNF8-216ENST00000573795 CCNA1P78396 465 aa26.64■■□□□ 1.86
SNF8-216ENST00000573795 SLFNL1Q499Z3 407 aa26.64■■□□□ 1.86
SNF8-216ENST00000573795 DIEXFQ68CQ4 756 aaKnown RBP26.64■■□□□ 1.86
SNF8-216ENST00000573795 SLC44A5Q8NCS7 719 aa26.64■■□□□ 1.86
SNF8-216ENST00000573795 ZNF236Q9UL36 1845 aa26.64■■□□□ 1.85
SNF8-216ENST00000573795 SLC15A5A6NIM6 579 aa26.63■■□□□ 1.85
SNF8-216ENST00000573795 SYN1P17600 705 aa26.63■■□□□ 1.85
SNF8-216ENST00000573795 GRB14Q14449 540 aa26.63■■□□□ 1.85
SNF8-216ENST00000573795 COG6Q9Y2V7 657 aa26.63■■□□□ 1.85
SNF8-216ENST00000573795 MYH7P12883 1935 aa26.63■■□□□ 1.85
SNF8-216ENST00000573795 HOXC6P09630 235 aa26.62■■□□□ 1.85
SNF8-216ENST00000573795 IFIT2P09913 472 aaKnown RBP26.62■■□□□ 1.85
SNF8-216ENST00000573795 KIAA1755Q5JYT7 1200 aa26.62■■□□□ 1.85
SNF8-216ENST00000573795 ARMT1Q9H993 441 aa26.62■■□□□ 1.85
SNF8-216ENST00000573795 CWC22Q9HCG8 908 aaKnown RBP26.62■■□□□ 1.85
SNF8-216ENST00000573795 PARP14Q460N5 1801 aa26.62■■□□□ 1.85
SNF8-216ENST00000573795 IGHA2P01877 340 aa26.61■■□□□ 1.85
SNF8-216ENST00000573795 MS4A1P11836 297 aa26.61■■□□□ 1.85
SNF8-216ENST00000573795 WDR78Q5VTH9 848 aa26.61■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms