RNA–Protein interactions for RNA: ENST00000573600.5

CTDNEP1-208, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CTDNEP1, Length 1,724 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-208ENST00000573600 SGIP1Q9BQI5 828 aa33.75■■■□□ 2.99
CTDNEP1-208ENST00000573600 DHX36Q9H2U1 1008 aaKnown RBP33.75■■■□□ 2.99
CTDNEP1-208ENST00000573600 TAOK2Q9UL54 1235 aa33.75■■■□□ 2.99
CTDNEP1-208ENST00000573600 NIM1KQ8IY84 436 aa33.74■■■□□ 2.99
CTDNEP1-208ENST00000573600 EHD4Q9H223 541 aa33.74■■■□□ 2.99
CTDNEP1-208ENST00000573600 RCOR1Q9UKL0 485 aa33.74■■■□□ 2.99
CTDNEP1-208ENST00000573600 PLIN4Q96Q06 1357 aa33.74■■■□□ 2.99
CTDNEP1-208ENST00000573600 FER1L6Q2WGJ9 1857 aa33.74■■■□□ 2.99
CTDNEP1-208ENST00000573600 GOLGA6L4A6NEF3 574 aa33.73■■■□□ 2.99
CTDNEP1-208ENST00000573600 PLEKHA8P1O95397 391 aa33.73■■■□□ 2.99
CTDNEP1-208ENST00000573600 XBP1P17861 261 aa33.73■■■□□ 2.99
CTDNEP1-208ENST00000573600 GUCY1A2P33402 732 aa33.73■■■□□ 2.99
CTDNEP1-208ENST00000573600 NFIAQ12857 509 aa33.73■■■□□ 2.99
CTDNEP1-208ENST00000573600 ZNRF3Q9ULT6 936 aa33.73■■■□□ 2.99
CTDNEP1-208ENST00000573600 GNL2Q13823 731 aaKnown RBP33.72■■■□□ 2.99
CTDNEP1-208ENST00000573600 SAFBQ15424 915 aaKnown RBP eCLIP33.72■■■□□ 2.99
CTDNEP1-208ENST00000573600 CFAP100Q494V2 611 aa33.72■■■□□ 2.99
CTDNEP1-208ENST00000573600 MYSM1Q5VVJ2 828 aa33.72■■■□□ 2.99
CTDNEP1-208ENST00000573600 USP28Q96RU2 1077 aa33.72■■■□□ 2.99
CTDNEP1-208ENST00000573600 HDAC9Q9UKV0 1011 aa33.72■■■□□ 2.99
CTDNEP1-208ENST00000573600 STX8Q9UNK0 236 aa33.72■■■□□ 2.99
CTDNEP1-208ENST00000573600 COL4A5P29400 1685 aa33.72■■■□□ 2.99
CTDNEP1-208ENST00000573600 KIF28PB7ZC32 967 aa33.71■■■□□ 2.99
CTDNEP1-208ENST00000573600 PSMD14O00487 310 aa33.71■■■□□ 2.99
CTDNEP1-208ENST00000573600 GNAQP50148 359 aa33.71■■■□□ 2.99
CTDNEP1-208ENST00000573600 TMEM47Q9BQJ4 181 aa33.71■■■□□ 2.99
CTDNEP1-208ENST00000573600 PCDHAC2Q9Y5I4 1007 aa33.71■■■□□ 2.99
CTDNEP1-208ENST00000573600 U2AF2P26368 475 aaKnown RBP eCLIP33.7■■■□□ 2.99
CTDNEP1-208ENST00000573600 GRM4Q14833 912 aa33.7■■■□□ 2.99
CTDNEP1-208ENST00000573600 RTEL1Q9NZ71 1219 aa33.7■■■□□ 2.99
CTDNEP1-208ENST00000573600 PPP1R1BQ9UD71 204 aaPredicted RBP33.7■■■□□ 2.99
CTDNEP1-208ENST00000573600 CNTNAP5Q8WYK1 1306 aa33.7■■■□□ 2.99
CTDNEP1-208ENST00000573600 UBE2Q2LH0YL09 131 aa33.7■■■□□ 2.98
CTDNEP1-208ENST00000573600 RAD17O75943 681 aa33.7■■■□□ 2.98
CTDNEP1-208ENST00000573600 MMP1P03956 469 aa33.7■■■□□ 2.98
CTDNEP1-208ENST00000573600 NOVP48745 357 aa33.7■■■□□ 2.98
CTDNEP1-208ENST00000573600 TAOK3Q9H2K8 898 aa33.7■■■□□ 2.98
CTDNEP1-208ENST00000573600 CCDC183Q5T5S1 534 aa33.69■■■□□ 2.98
CTDNEP1-208ENST00000573600 GMLQ99445 158 aa33.69■■■□□ 2.98
CTDNEP1-208ENST00000573600 SRBD1Q8N5C6 995 aaKnown RBP33.68■■■□□ 2.98
CTDNEP1-208ENST00000573600 POLR3EQ9NVU0 708 aa33.68■■■□□ 2.98
CTDNEP1-208ENST00000573600 FAM198AQ9UFP1 575 aa33.68■■■□□ 2.98
CTDNEP1-208ENST00000573600 V9GY48 417 aaPredicted RBP33.68■■■□□ 2.98
CTDNEP1-208ENST00000573600 TOP1P11387 765 aaKnown RBP33.67■■■□□ 2.98
CTDNEP1-208ENST00000573600 CEBPZQ03701 1054 aaKnown RBP33.67■■■□□ 2.98
CTDNEP1-208ENST00000573600 PKN1Q16512 942 aa33.67■■■□□ 2.98
CTDNEP1-208ENST00000573600 ENTPD3O75355 529 aa33.67■■■□□ 2.98
CTDNEP1-208ENST00000573600 LETM1O95202 739 aaPredicted RBP33.67■■■□□ 2.98
CTDNEP1-208ENST00000573600 AGBL3Q8NEM8 1001 aa33.67■■■□□ 2.98
CTDNEP1-208ENST00000573600 CEP95Q96GE4 821 aa33.67■■■□□ 2.98
CTDNEP1-208ENST00000573600 GNL3Q9BVP2 549 aaKnown RBP eCLIP33.67■■■□□ 2.98
CTDNEP1-208ENST00000573600 KLHL34Q8N239 644 aa33.66■■■□□ 2.98
CTDNEP1-208ENST00000573600 OGFOD1Q8N543 542 aa33.66■■■□□ 2.98
CTDNEP1-208ENST00000573600 FOXP1Q9H334 677 aaPredicted RBP33.66■■■□□ 2.98
CTDNEP1-208ENST00000573600 PI4KBQ9UBF8 816 aa33.66■■■□□ 2.98
CTDNEP1-208ENST00000573600 YEATS4O95619 227 aa33.65■■■□□ 2.98
CTDNEP1-208ENST00000573600 TPRNQ4KMQ1 711 aa33.65■■■□□ 2.98
CTDNEP1-208ENST00000573600 PGBD1Q96JS3 809 aa33.65■■■□□ 2.98
CTDNEP1-208ENST00000573600 LZTS2Q9BRK4 669 aa33.65■■■□□ 2.98
CTDNEP1-208ENST00000573600 COL2A1P02458 1487 aaPredicted RBP33.65■■■□□ 2.98
CTDNEP1-208ENST00000573600 SHMT1P34896 483 aa33.65■■■□□ 2.98
CTDNEP1-208ENST00000573600 MRE11P49959 708 aa33.65■■■□□ 2.98
CTDNEP1-208ENST00000573600 CACNB3P54284 484 aa33.65■■■□□ 2.98
CTDNEP1-208ENST00000573600 ZFPM1Q8IX07 1006 aa33.65■■■□□ 2.98
CTDNEP1-208ENST00000573600 PRMT6Q96LA8 375 aaPredicted RBP33.65■■■□□ 2.98
CTDNEP1-208ENST00000573600 CCDC17Q96LX7 622 aa33.65■■■□□ 2.98
CTDNEP1-208ENST00000573600 TDRD3Q9H7E2 651 aaKnown RBP33.65■■■□□ 2.98
CTDNEP1-208ENST00000573600 PTGER2P43116 358 aa33.64■■■□□ 2.98
CTDNEP1-208ENST00000573600 NASPP49321 788 aaPredicted RBP33.64■■■□□ 2.98
CTDNEP1-208ENST00000573600 TCP10Q12799 353 aa33.64■■■□□ 2.98
CTDNEP1-208ENST00000573600 PPP4R3BQ5MIZ7 849 aa33.64■■■□□ 2.98
CTDNEP1-208ENST00000573600 GAS2L3Q86XJ1 694 aa33.64■■■□□ 2.98
CTDNEP1-208ENST00000573600 JDP2Q8WYK2 163 aa33.64■■■□□ 2.98
CTDNEP1-208ENST00000573600 FTOQ9C0B1 505 aaKnown RBP eCLIP33.64■■■□□ 2.98
CTDNEP1-208ENST00000573600 TMOD2Q9NZR1 351 aa33.64■■■□□ 2.98
CTDNEP1-208ENST00000573600 MAD2L2Q9UI95 211 aa33.64■■■□□ 2.98
CTDNEP1-208ENST00000573600 SIPA1L1O43166 1804 aa33.64■■■□□ 2.98
CTDNEP1-208ENST00000573600 IGKV6D-41A0A0C4DH26 115 aa33.63■■■□□ 2.97
CTDNEP1-208ENST00000573600 AKR1B1P15121 316 aa33.63■■■□□ 2.97
CTDNEP1-208ENST00000573600 LRSAM1Q6UWE0 723 aa33.63■■■□□ 2.97
CTDNEP1-208ENST00000573600 FOXP4Q8IVH2 680 aaPredicted RBP33.63■■■□□ 2.97
CTDNEP1-208ENST00000573600 DIS3L2Q8IYB7 885 aaKnown RBP33.63■■■□□ 2.97
CTDNEP1-208ENST00000573600 MTMR4Q9NYA4 1195 aa33.63■■■□□ 2.97
CTDNEP1-208ENST00000573600 KCNJ14Q9UNX9 436 aa33.63■■■□□ 2.97
CTDNEP1-208ENST00000573600 SYCE3A1L190 88 aa33.62■■■□□ 2.97
CTDNEP1-208ENST00000573600 SPDYE2BA6NHP3 402 aa33.62■■■□□ 2.97
CTDNEP1-208ENST00000573600 SPDYE6P0CI01 402 aa33.62■■■□□ 2.97
CTDNEP1-208ENST00000573600 NOSTRINQ8IVI9 506 aa33.62■■■□□ 2.97
CTDNEP1-208ENST00000573600 KCNG4Q8TDN1 519 aa33.62■■■□□ 2.97
CTDNEP1-208ENST00000573600 ATRNL1Q5VV63 1379 aa33.62■■■□□ 2.97
CTDNEP1-208ENST00000573600 PSDA5PKW4 1024 aaPredicted RBP33.62■■■□□ 2.97
CTDNEP1-208ENST00000573600 STK38Q15208 465 aa33.62■■■□□ 2.97
CTDNEP1-208ENST00000573600 DLGAP5Q15398 846 aa33.62■■■□□ 2.97
CTDNEP1-208ENST00000573600 LINC00301Q8NCQ3 95 aa33.62■■■□□ 2.97
CTDNEP1-208ENST00000573600 BICD2Q8TD16 824 aa33.62■■■□□ 2.97
CTDNEP1-208ENST00000573600 GREB1LQ9C091 1923 aaPredicted RBP33.61■■■□□ 2.97
CTDNEP1-208ENST00000573600 PALM3A6NDB9 673 aaPredicted RBP33.61■■■□□ 2.97
CTDNEP1-208ENST00000573600 DDTLA6NHG4 134 aaPredicted RBP33.61■■■□□ 2.97
CTDNEP1-208ENST00000573600 ANO1Q5XXA6 986 aa33.61■■■□□ 2.97
CTDNEP1-208ENST00000573600 ZSCAN29Q8IWY8 852 aaPredicted RBP33.61■■■□□ 2.97
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms