RNA–Protein interactions for RNA: ENST00000573018.1

ERCC4-204, Transcript of ERCC excision repair 4, endonuclease catalytic subunit, humanhuman

TSL 2

Gene ERCC4, Length 523 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4-204ENST00000573018 SOWAHDA6NJG2 315 aa6.28□□□□□ -1.4
ERCC4-204ENST00000573018 DLG4P78352 724 aa6.28□□□□□ -1.4
ERCC4-204ENST00000573018 TIGD5Q53EQ6 642 aa6.28□□□□□ -1.4
ERCC4-204ENST00000573018 BAHD1Q8TBE0 780 aaPredicted RBP6.28□□□□□ -1.4
ERCC4-204ENST00000573018 Q96M66 194 aa6.28□□□□□ -1.4
ERCC4-204ENST00000573018 SRCIN1Q9C0H9 1055 aa6.28□□□□□ -1.4
ERCC4-204ENST00000573018 SNCAIPQ9Y6H5 919 aa6.28□□□□□ -1.4
ERCC4-204ENST00000573018 TREHO43280 583 aa6.27□□□□□ -1.41
ERCC4-204ENST00000573018 FOXD2O60548 495 aaPredicted RBP6.27□□□□□ -1.41
ERCC4-204ENST00000573018 MAPK1P28482 360 aa6.27□□□□□ -1.41
ERCC4-204ENST00000573018 MAPK8P45983 427 aa6.27□□□□□ -1.41
ERCC4-204ENST00000573018 EGR3Q06889 387 aa6.27□□□□□ -1.41
ERCC4-204ENST00000573018 TMEM132EQ6IEE7 984 aa6.27□□□□□ -1.41
ERCC4-204ENST00000573018 PIWIL2Q8TC59 973 aaKnown RBP6.27□□□□□ -1.41
ERCC4-204ENST00000573018 COX4I2Q96KJ9 171 aa6.27□□□□□ -1.41
ERCC4-204ENST00000573018 SGPP1Q9BX95 441 aa6.27□□□□□ -1.41
ERCC4-204ENST00000573018 DUSP15Q9H1R2 295 aaPredicted RBP6.27□□□□□ -1.41
ERCC4-204ENST00000573018 PDZD8Q8NEN9 1154 aa6.26□□□□□ -1.41
ERCC4-204ENST00000573018 KRTAP17-1Q9BYP8 105 aa6.26□□□□□ -1.41
ERCC4-204ENST00000573018 SLC6A17Q9H1V8 727 aa6.26□□□□□ -1.41
ERCC4-204ENST00000573018 TJP2Q9UDY2 1190 aa6.26□□□□□ -1.41
ERCC4-204ENST00000573018 DUSP13Q9UII6 198 aa6.26□□□□□ -1.41
ERCC4-204ENST00000573018 CNOT6Q9ULM6 557 aaKnown RBP6.26□□□□□ -1.41
ERCC4-204ENST00000573018 ZGLP1P0C6A0 271 aa6.25□□□□□ -1.41
ERCC4-204ENST00000573018 USP17L7P0C7H9 530 aa6.25□□□□□ -1.41
ERCC4-204ENST00000573018 PDE6BP35913 854 aa6.25□□□□□ -1.41
ERCC4-204ENST00000573018 GAB4Q2WGN9 574 aa6.25□□□□□ -1.41
ERCC4-204ENST00000573018 TTBK2Q6IQ55 1244 aa6.25□□□□□ -1.41
ERCC4-204ENST00000573018 IRF2BP1Q8IU81 584 aa6.25□□□□□ -1.41
ERCC4-204ENST00000573018 KCNC2Q96PR1 638 aa6.25□□□□□ -1.41
ERCC4-204ENST00000573018 WWC3Q9ULE0 1092 aa6.25□□□□□ -1.41
ERCC4-204ENST00000573018 KCTD3Q9Y597 815 aa6.25□□□□□ -1.41
ERCC4-204ENST00000573018 PGRP06401 933 aa6.24□□□□□ -1.41
ERCC4-204ENST00000573018 ETV3P41162 512 aa6.24□□□□□ -1.41
ERCC4-204ENST00000573018 GALK1P51570 392 aa6.24□□□□□ -1.41
ERCC4-204ENST00000573018 SEPT6Q14141 434 aa6.24□□□□□ -1.41
ERCC4-204ENST00000573018 TCERG1LQ5VWI1 586 aa6.24□□□□□ -1.41
ERCC4-204ENST00000573018 LILRA2Q8N149 483 aa6.24□□□□□ -1.41
ERCC4-204ENST00000573018 OXR1Q8N573 874 aa6.24□□□□□ -1.41
ERCC4-204ENST00000573018 FBF1Q8TES7 1133 aa6.24□□□□□ -1.41
ERCC4-204ENST00000573018 ANKRD24Q8TF21 1146 aa6.24□□□□□ -1.41
ERCC4-204ENST00000573018 INTS4Q96HW7 963 aaKnown RBP6.24□□□□□ -1.41
ERCC4-204ENST00000573018 TRIT1Q9H3H1 467 aaKnown RBP6.24□□□□□ -1.41
ERCC4-204ENST00000573018 TTF2Q9UNY4 1162 aaKnown RBP6.24□□□□□ -1.41
ERCC4-204ENST00000573018 PCDHB5Q9Y5E4 795 aa6.24□□□□□ -1.41
ERCC4-204ENST00000573018 ADAMTS20P59510 1910 aa6.24□□□□□ -1.41
ERCC4-204ENST00000573018 TRIM13O60858 407 aa6.23□□□□□ -1.41
ERCC4-204ENST00000573018 SEMA7AO75326 666 aa6.23□□□□□ -1.41
ERCC4-204ENST00000573018 SYN1P17600 705 aa6.23□□□□□ -1.41
ERCC4-204ENST00000573018 LTKP29376 864 aa6.23□□□□□ -1.41
ERCC4-204ENST00000573018 NFIXQ14938 502 aa6.23□□□□□ -1.41
ERCC4-204ENST00000573018 MARCH10Q8NA82 808 aaPredicted RBP6.23□□□□□ -1.41
ERCC4-204ENST00000573018 TMEM87BQ96K49 555 aa6.23□□□□□ -1.41
ERCC4-204ENST00000573018 GCM1Q9NP62 436 aa6.23□□□□□ -1.41
ERCC4-204ENST00000573018 GPATCH2Q9NW75 528 aa6.23□□□□□ -1.41
ERCC4-204ENST00000573018 GPR160Q9UJ42 338 aa6.23□□□□□ -1.41
ERCC4-204ENST00000573018 PCDHA11Q9Y5I1 949 aa6.23□□□□□ -1.41
ERCC4-204ENST00000573018 TEX51A0A1B0GUA7 166 aa6.22□□□□□ -1.41
ERCC4-204ENST00000573018 FITM1A5D6W6 292 aa6.22□□□□□ -1.41
ERCC4-204ENST00000573018 GFRA2O00451 464 aa6.22□□□□□ -1.41
ERCC4-204ENST00000573018 PEX10O60683 326 aa6.22□□□□□ -1.41
ERCC4-204ENST00000573018 SSPNQ14714 243 aa6.22□□□□□ -1.41
ERCC4-204ENST00000573018 ZNF385BQ569K4 471 aa6.22□□□□□ -1.41
ERCC4-204ENST00000573018 MRPL41Q8IXM3 137 aaKnown RBP6.22□□□□□ -1.41
ERCC4-204ENST00000573018 DNAJB8Q8NHS0 232 aa6.22□□□□□ -1.41
ERCC4-204ENST00000573018 C12orf49Q9H741 205 aa6.22□□□□□ -1.41
ERCC4-204ENST00000573018 CWC22Q9HCG8 908 aaKnown RBP6.22□□□□□ -1.41
ERCC4-204ENST00000573018 YBX2Q9Y2T7 364 aaKnown RBP6.22□□□□□ -1.41
ERCC4-204ENST00000573018 GIPC1O14908 333 aa6.21□□□□□ -1.42
ERCC4-204ENST00000573018 LMNB1P20700 586 aa6.21□□□□□ -1.42
ERCC4-204ENST00000573018 SV2BQ7L1I2 683 aa6.21□□□□□ -1.42
ERCC4-204ENST00000573018 TSPYL5Q86VY4 417 aaPredicted RBP6.21□□□□□ -1.42
ERCC4-204ENST00000573018 DTWD2Q8NBA8 298 aa6.21□□□□□ -1.42
ERCC4-204ENST00000573018 GPR62Q9BZJ7 368 aa6.21□□□□□ -1.42
ERCC4-204ENST00000573018 ZNF552Q9H707 407 aaPredicted RBP6.21□□□□□ -1.42
ERCC4-204ENST00000573018 FAM8A1Q9UBU6 413 aa6.21□□□□□ -1.42
ERCC4-204ENST00000573018 RFXAPO00287 272 aa6.2□□□□□ -1.42
ERCC4-204ENST00000573018 SLC6A19Q695T7 634 aa6.2□□□□□ -1.42
ERCC4-204ENST00000573018 ALG1LQ6GMV1 187 aa6.2□□□□□ -1.42
ERCC4-204ENST00000573018 PANK1Q8TE04 598 aa6.2□□□□□ -1.42
ERCC4-204ENST00000573018 DHX38Q92620 1227 aaKnown RBP6.2□□□□□ -1.42
ERCC4-204ENST00000573018 EBF1Q9UH73 591 aa6.2□□□□□ -1.42
ERCC4-204ENST00000573018 CEP131Q9UPN4 1083 aa6.2□□□□□ -1.42
ERCC4-204ENST00000573018 SPG7Q9UQ90 795 aa6.2□□□□□ -1.42
ERCC4-204ENST00000573018 PSPNO60542 156 aa6.19□□□□□ -1.42
ERCC4-204ENST00000573018 LRRN2O75325 713 aa6.19□□□□□ -1.42
ERCC4-204ENST00000573018 PI3P19957 117 aa6.19□□□□□ -1.42
ERCC4-204ENST00000573018 FMR1Q06787 632 aaKnown RBP eCLIP6.19□□□□□ -1.42
ERCC4-204ENST00000573018 NR0B2Q15466 257 aa6.19□□□□□ -1.42
ERCC4-204ENST00000573018 SIRT2Q8IXJ6 389 aa6.19□□□□□ -1.42
ERCC4-204ENST00000573018 SYTL4Q96C24 671 aaPredicted RBP6.19□□□□□ -1.42
ERCC4-204ENST00000573018 RTEL1Q9NZ71 1219 aa6.19□□□□□ -1.42
ERCC4-204ENST00000573018 MAP3K11Q16584 847 aa6.18□□□□□ -1.42
ERCC4-204ENST00000573018 DBX2Q6ZNG2 339 aa6.18□□□□□ -1.42
ERCC4-204ENST00000573018 MCATQ8IVS2 390 aaKnown RBP6.18□□□□□ -1.42
ERCC4-204ENST00000573018 RETREG2Q8NC44 543 aa6.18□□□□□ -1.42
ERCC4-204ENST00000573018 PPP1R13LQ8WUF5 828 aa6.18□□□□□ -1.42
ERCC4-204ENST00000573018 ACSF2Q96CM8 615 aaPredicted RBP6.18□□□□□ -1.42
ERCC4-204ENST00000573018 KRTAP10-2P60368 255 aa6.17□□□□□ -1.42
ERCC4-204ENST00000573018 ATP2B2Q01814 1243 aa6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms