RNA–Protein interactions for RNA: ENST00000572949.5

USP6-204, Transcript of ubiquitin specific peptidase 6, humanhuman

TSL 2

Gene USP6, Length 7,862 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6-204ENST00000572949 HERC4Q5GLZ8 1057 aaPredicted RBP10.47□□□□□ -0.73
USP6-204ENST00000572949 CCDC62Q6P9F0 684 aa10.47□□□□□ -0.73
USP6-204ENST00000572949 MAPKAPK5Q8IW41 473 aa10.47□□□□□ -0.73
USP6-204ENST00000572949 MIPOL1Q8TD10 442 aa10.47□□□□□ -0.73
USP6-204ENST00000572949 CNKSR1Q969H4 720 aa10.47□□□□□ -0.73
USP6-204ENST00000572949 DNAI1Q9UI46 699 aa10.47□□□□□ -0.73
USP6-204ENST00000572949 MOSPD1Q9UJG1 213 aa10.47□□□□□ -0.73
USP6-204ENST00000572949 CNPY2Q9Y2B0 182 aa10.47□□□□□ -0.73
USP6-204ENST00000572949 BZW2Q9Y6E2 419 aaKnown RBP10.47□□□□□ -0.73
USP6-204ENST00000572949 HVCN1Q96D96 273 aa10.47□□□□□ -0.73
USP6-204ENST00000572949 SCYL1Q96KG9 808 aa10.46□□□□□ -0.73
USP6-204ENST00000572949 HAUS8Q9BT25 410 aa10.46□□□□□ -0.73
USP6-204ENST00000572949 BRPF3Q9ULD4 1205 aa10.46□□□□□ -0.73
USP6-204ENST00000572949 ANGPTL3Q9Y5C1 460 aa10.46□□□□□ -0.73
USP6-204ENST00000572949 STAM2O75886 525 aa10.46□□□□□ -0.73
USP6-204ENST00000572949 PRPF38AQ8NAV1 312 aaKnown RBP10.46□□□□□ -0.73
USP6-204ENST00000572949 CLGNO14967 610 aa10.46□□□□□ -0.73
USP6-204ENST00000572949 GCP02774 474 aa10.46□□□□□ -0.73
USP6-204ENST00000572949 MFSD14BQ5SR56 506 aa10.46□□□□□ -0.73
USP6-204ENST00000572949 SNX29Q8TEQ0 813 aa10.46□□□□□ -0.73
USP6-204ENST00000572949 DNAJC21Q5F1R6 531 aaKnown RBP10.46□□□□□ -0.74
USP6-204ENST00000572949 LINS1Q8NG48 757 aa10.46□□□□□ -0.74
USP6-204ENST00000572949 BICC1Q9H694 974 aaKnown RBP10.46□□□□□ -0.74
USP6-204ENST00000572949 BRAPQ7Z569 592 aa10.46□□□□□ -0.74
USP6-204ENST00000572949 TRERF1Q96PN7 1200 aa10.46□□□□□ -0.74
USP6-204ENST00000572949 MIS12Q9H081 205 aa10.46□□□□□ -0.74
USP6-204ENST00000572949 CTTNBP2NLQ9P2B4 639 aa10.46□□□□□ -0.74
USP6-204ENST00000572949 TBC1D8O95759 1140 aa10.46□□□□□ -0.74
USP6-204ENST00000572949 LMNB1P20700 586 aa10.46□□□□□ -0.74
USP6-204ENST00000572949 IQGAP2Q13576 1575 aa10.46□□□□□ -0.74
USP6-204ENST00000572949 NXNQ6DKJ4 435 aa10.45□□□□□ -0.74
USP6-204ENST00000572949 LZTFL1Q9NQ48 299 aa10.45□□□□□ -0.74
USP6-204ENST00000572949 TBC1D8BQ0IIM8 1120 aa10.45□□□□□ -0.74
USP6-204ENST00000572949 CWF19L2Q2TBE0 894 aaKnown RBP10.45□□□□□ -0.74
USP6-204ENST00000572949 RILPQ96NA2 401 aa10.45□□□□□ -0.74
USP6-204ENST00000572949 MYO1AQ9UBC5 1043 aa10.45□□□□□ -0.74
USP6-204ENST00000572949 PARP2Q9UGN5 583 aa10.45□□□□□ -0.74
USP6-204ENST00000572949 ADGRF5Q8IZF2 1346 aa10.45□□□□□ -0.74
USP6-204ENST00000572949 INPP1P49441 399 aa10.45□□□□□ -0.74
USP6-204ENST00000572949 ZNF131P52739 623 aa10.45□□□□□ -0.74
USP6-204ENST00000572949 LACTBP83111 547 aaPredicted RBP10.45□□□□□ -0.74
USP6-204ENST00000572949 DMP1Q13316 513 aaPredicted RBP10.45□□□□□ -0.74
USP6-204ENST00000572949 RETREG2Q8NC44 543 aa10.45□□□□□ -0.74
USP6-204ENST00000572949 MRPL11Q9Y3B7 192 aaKnown RBP10.45□□□□□ -0.74
USP6-204ENST00000572949 DHX29Q7Z478 1369 aaKnown RBP10.45□□□□□ -0.74
USP6-204ENST00000572949 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.45□□□□□ -0.74
USP6-204ENST00000572949 B4E1Z4 1266 aa10.45□□□□□ -0.74
USP6-204ENST00000572949 TAF5LO75529 589 aa10.45□□□□□ -0.74
USP6-204ENST00000572949 RDH13Q8NBN7 331 aa10.45□□□□□ -0.74
USP6-204ENST00000572949 PIDD1Q9HB75 910 aa10.45□□□□□ -0.74
USP6-204ENST00000572949 NCOA1Q15788 1441 aa10.45□□□□□ -0.74
USP6-204ENST00000572949 UHRF1BP1Q6BDS2 1440 aa10.45□□□□□ -0.74
USP6-204ENST00000572949 CDK13Q14004 1512 aaKnown RBP10.45□□□□□ -0.74
USP6-204ENST00000572949 F8W8V4 182 aa10.45□□□□□ -0.74
USP6-204ENST00000572949 NFKBIAP25963 317 aa10.45□□□□□ -0.74
USP6-204ENST00000572949 EXOC8Q8IYI6 725 aa10.45□□□□□ -0.74
USP6-204ENST00000572949 ARHGEF37A1IGU5 675 aa10.45□□□□□ -0.74
USP6-204ENST00000572949 DEXIO95424 95 aa10.45□□□□□ -0.74
USP6-204ENST00000572949 SLC4A1P02730 911 aa10.45□□□□□ -0.74
USP6-204ENST00000572949 SAT1P21673 171 aa10.45□□□□□ -0.74
USP6-204ENST00000572949 RNASE9P60153 205 aaKnown RBP10.45□□□□□ -0.74
USP6-204ENST00000572949 CCDC122Q5T0U0 273 aa10.45□□□□□ -0.74
USP6-204ENST00000572949 TMEM191BP0C7N4 346 aa10.44□□□□□ -0.74
USP6-204ENST00000572949 RFC1P35251 1148 aaPredicted RBP10.44□□□□□ -0.74
USP6-204ENST00000572949 RNF219Q5W0B1 726 aaPredicted RBP10.44□□□□□ -0.74
USP6-204ENST00000572949 KIAA0825Q8IV33 1275 aa10.44□□□□□ -0.74
USP6-204ENST00000572949 TPCN1Q9ULQ1 816 aa10.44□□□□□ -0.74
USP6-204ENST00000572949 LRRIQ4A6NIV6 560 aa10.44□□□□□ -0.74
USP6-204ENST00000572949 IQCB1Q15051 598 aa10.44□□□□□ -0.74
USP6-204ENST00000572949 DOK7Q18PE1 504 aa10.44□□□□□ -0.74
USP6-204ENST00000572949 XKR9Q5GH70 373 aa10.44□□□□□ -0.74
USP6-204ENST00000572949 SPATA17Q96L03 361 aa10.44□□□□□ -0.74
USP6-204ENST00000572949 NRBP2Q9NSY0 501 aa10.44□□□□□ -0.74
USP6-204ENST00000572949 ATP11AP98196 1134 aa10.44□□□□□ -0.74
USP6-204ENST00000572949 HHATQ5VTY9 493 aa10.44□□□□□ -0.74
USP6-204ENST00000572949 ARFGAP2Q8N6H7 521 aa10.44□□□□□ -0.74
USP6-204ENST00000572949 SKILP12757 684 aa10.44□□□□□ -0.74
USP6-204ENST00000572949 ANXA13P27216 316 aa10.44□□□□□ -0.74
USP6-204ENST00000572949 TFDP1Q14186 410 aa10.44□□□□□ -0.74
USP6-204ENST00000572949 CSRNP1Q96S65 589 aa10.44□□□□□ -0.74
USP6-204ENST00000572949 MEIS3Q99687 375 aa10.44□□□□□ -0.74
USP6-204ENST00000572949 RBSNQ9H1K0 784 aa10.44□□□□□ -0.74
USP6-204ENST00000572949 UTP18Q9Y5J1 556 aaKnown RBP eCLIP10.44□□□□□ -0.74
USP6-204ENST00000572949 DPYSL4O14531 572 aa10.44□□□□□ -0.74
USP6-204ENST00000572949 CERKLQ49MI3 558 aaPredicted RBP10.44□□□□□ -0.74
USP6-204ENST00000572949 DHX32Q7L7V1 743 aaKnown RBP10.44□□□□□ -0.74
USP6-204ENST00000572949 PNMA8AQ86V59 439 aaPredicted RBP10.44□□□□□ -0.74
USP6-204ENST00000572949 DCLK2Q8N568 766 aa10.44□□□□□ -0.74
USP6-204ENST00000572949 HDAC11Q96DB2 347 aa10.44□□□□□ -0.74
USP6-204ENST00000572949 YTHDC2Q9H6S0 1430 aaKnown RBP10.44□□□□□ -0.74
USP6-204ENST00000572949 TUBB4BP68371 445 aa10.44□□□□□ -0.74
USP6-204ENST00000572949 KARSQ15046 597 aaKnown RBP10.44□□□□□ -0.74
USP6-204ENST00000572949 MAP3K5Q99683 1374 aa10.44□□□□□ -0.74
USP6-204ENST00000572949 H0YCG3 227 aa10.43□□□□□ -0.74
USP6-204ENST00000572949 PPFIA2O75334 1257 aa10.43□□□□□ -0.74
USP6-204ENST00000572949 FBLN1P23142 703 aa10.43□□□□□ -0.74
USP6-204ENST00000572949 HADHQ16836 314 aaKnown RBP10.43□□□□□ -0.74
USP6-204ENST00000572949 PRR16Q569H4 304 aa10.43□□□□□ -0.74
USP6-204ENST00000572949 GBP6Q6ZN66 633 aa10.43□□□□□ -0.74
USP6-204ENST00000572949 MYLK4Q86YV6 388 aaPredicted RBP10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms