RNA–Protein interactions for RNA: ENST00000572445.1

PRPF8-204, Transcript of pre-mRNA processing factor 8, humanhuman

TSL 2

Gene PRPF8, Length 648 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-204ENST00000572445 TMC7Q7Z402 723 aa7.89□□□□□ -1.15
PRPF8-204ENST00000572445 KLHDC4Q8TBB5 520 aa7.89□□□□□ -1.15
PRPF8-204ENST00000572445 SP7Q8TDD2 431 aaPredicted RBP7.89□□□□□ -1.15
PRPF8-204ENST00000572445 SUCLG2Q96I99 432 aa7.89□□□□□ -1.15
PRPF8-204ENST00000572445 TMEM39BQ9GZU3 492 aa7.89□□□□□ -1.15
PRPF8-204ENST00000572445 UNC93B1Q9H1C4 597 aa7.89□□□□□ -1.15
PRPF8-204ENST00000572445 TDRD3Q9H7E2 651 aaKnown RBP7.89□□□□□ -1.15
PRPF8-204ENST00000572445 TTF2Q9UNY4 1162 aaKnown RBP7.89□□□□□ -1.15
PRPF8-204ENST00000572445 TNRC18O15417 2968 aaPredicted RBP7.88□□□□□ -1.15
PRPF8-204ENST00000572445 GRM8O00222 908 aa7.88□□□□□ -1.15
PRPF8-204ENST00000572445 ANP32CO43423 234 aa7.88□□□□□ -1.15
PRPF8-204ENST00000572445 ERCC5P28715 1186 aaPredicted RBP7.88□□□□□ -1.15
PRPF8-204ENST00000572445 RGS19P49795 217 aa7.88□□□□□ -1.15
PRPF8-204ENST00000572445 CRHR2Q13324 411 aa7.88□□□□□ -1.15
PRPF8-204ENST00000572445 RASA3Q14644 834 aa7.88□□□□□ -1.15
PRPF8-204ENST00000572445 COL19A1Q14993 1142 aa7.88□□□□□ -1.15
PRPF8-204ENST00000572445 GRIK5Q16478 980 aa7.88□□□□□ -1.15
PRPF8-204ENST00000572445 BEND3Q5T5X7 828 aa7.88□□□□□ -1.15
PRPF8-204ENST00000572445 SH3RF1Q7Z6J0 888 aa7.88□□□□□ -1.15
PRPF8-204ENST00000572445 VPS37DQ86XT2 251 aa7.88□□□□□ -1.15
PRPF8-204ENST00000572445 MRPL50Q8N5N7 158 aaKnown RBP7.88□□□□□ -1.15
PRPF8-204ENST00000572445 OTUD5Q96G74 571 aa7.88□□□□□ -1.15
PRPF8-204ENST00000572445 PRMT6Q96LA8 375 aaPredicted RBP7.88□□□□□ -1.15
PRPF8-204ENST00000572445 PLA2G12BQ9BX93 195 aa7.88□□□□□ -1.15
PRPF8-204ENST00000572445 RNF19AQ9NV58 838 aa7.88□□□□□ -1.15
PRPF8-204ENST00000572445 RBM19Q9Y4C8 960 aaKnown RBP7.88□□□□□ -1.15
PRPF8-204ENST00000572445 COL1A1P02452 1464 aaPredicted RBP7.87□□□□□ -1.15
PRPF8-204ENST00000572445 LAMB1P07942 1786 aa7.87□□□□□ -1.15
PRPF8-204ENST00000572445 SNPHO15079 494 aa7.87□□□□□ -1.15
PRPF8-204ENST00000572445 PPP1R12BO60237 982 aaPredicted RBP7.87□□□□□ -1.15
PRPF8-204ENST00000572445 VAMP4O75379 141 aa7.87□□□□□ -1.15
PRPF8-204ENST00000572445 IREB2P48200 963 aaKnown RBP7.87□□□□□ -1.15
PRPF8-204ENST00000572445 BCAMP50895 628 aa7.87□□□□□ -1.15
PRPF8-204ENST00000572445 RAD51AP2Q09MP3 1159 aa7.87□□□□□ -1.15
PRPF8-204ENST00000572445 C4orf48Q5BLP8 95 aa7.87□□□□□ -1.15
PRPF8-204ENST00000572445 METTL24Q5JXM2 366 aa7.87□□□□□ -1.15
PRPF8-204ENST00000572445 FBXO46Q6PJ61 603 aaPredicted RBP7.87□□□□□ -1.15
PRPF8-204ENST00000572445 OTOP1Q7RTM1 612 aa7.87□□□□□ -1.15
PRPF8-204ENST00000572445 HELQQ8TDG4 1101 aa7.87□□□□□ -1.15
PRPF8-204ENST00000572445 UBXN4Q92575 508 aa7.87□□□□□ -1.15
PRPF8-204ENST00000572445 OPTNQ96CV9 577 aa7.87□□□□□ -1.15
PRPF8-204ENST00000572445 FAM161BQ96MY7 647 aa7.87□□□□□ -1.15
PRPF8-204ENST00000572445 CHMP4AQ9BY43 222 aa7.87□□□□□ -1.15
PRPF8-204ENST00000572445 BICC1Q9H694 974 aaKnown RBP7.87□□□□□ -1.15
PRPF8-204ENST00000572445 PCDHB11Q9Y5F2 797 aa7.87□□□□□ -1.15
PRPF8-204ENST00000572445 DOCK2Q92608 1830 aa7.87□□□□□ -1.15
PRPF8-204ENST00000572445 IL16Q14005 1332 aa7.86□□□□□ -1.15
PRPF8-204ENST00000572445 IRS2Q9Y4H2 1338 aa7.86□□□□□ -1.15
PRPF8-204ENST00000572445 MANSC4A6NHS7 340 aaPredicted RBP7.86□□□□□ -1.15
PRPF8-204ENST00000572445 CSF1RP07333 972 aa7.86□□□□□ -1.15
PRPF8-204ENST00000572445 PBX2P40425 430 aa7.86□□□□□ -1.15
PRPF8-204ENST00000572445 CAP1Q01518 475 aa7.86□□□□□ -1.15
PRPF8-204ENST00000572445 TAF1CQ15572 869 aaPredicted RBP7.86□□□□□ -1.15
PRPF8-204ENST00000572445 LRRC24Q50LG9 513 aa7.86□□□□□ -1.15
PRPF8-204ENST00000572445 SERBP1Q8NC51 408 aaKnown RBP eCLIP7.86□□□□□ -1.15
PRPF8-204ENST00000572445 ZBED3Q96IU2 234 aaPredicted RBP7.86□□□□□ -1.15
PRPF8-204ENST00000572445 SPATA32Q96LK8 384 aa7.86□□□□□ -1.15
PRPF8-204ENST00000572445 SPSB2Q99619 263 aa7.86□□□□□ -1.15
PRPF8-204ENST00000572445 SRCIN1Q9C0H9 1055 aa7.86□□□□□ -1.15
PRPF8-204ENST00000572445 ZNF70Q9UC06 446 aaPredicted RBP7.86□□□□□ -1.15
PRPF8-204ENST00000572445 RBBP6Q7Z6E9 1792 aaKnown RBP7.86□□□□□ -1.15
PRPF8-204ENST00000572445 CEP290O15078 2479 aa7.86□□□□□ -1.15
PRPF8-204ENST00000572445 MYH2Q9UKX2 1941 aa7.86□□□□□ -1.15
PRPF8-204ENST00000572445 CCL15-CCL14A0A0B4J2E2 113 aa7.85□□□□□ -1.15
PRPF8-204ENST00000572445 TLL1O43897 1013 aa7.85□□□□□ -1.15
PRPF8-204ENST00000572445 NBPF7P0C2Y1 421 aaPredicted RBP7.85□□□□□ -1.15
PRPF8-204ENST00000572445 HIBADHP31937 336 aaKnown RBP7.85□□□□□ -1.15
PRPF8-204ENST00000572445 CRKP46108 304 aa7.85□□□□□ -1.15
PRPF8-204ENST00000572445 PPP4CP60510 307 aa7.85□□□□□ -1.15
PRPF8-204ENST00000572445 VGLL4Q14135 290 aa7.85□□□□□ -1.15
PRPF8-204ENST00000572445 CCL15Q16663 113 aa7.85□□□□□ -1.15
PRPF8-204ENST00000572445 DZIP1LQ8IYY4 767 aaKnown RBP7.85□□□□□ -1.15
PRPF8-204ENST00000572445 FOXJ1Q92949 421 aa7.85□□□□□ -1.15
PRPF8-204ENST00000572445 SIL1Q9H173 461 aa7.85□□□□□ -1.15
PRPF8-204ENST00000572445 USP2O75604 605 aaPredicted RBP7.84□□□□□ -1.15
PRPF8-204ENST00000572445 IL1R1P14778 569 aa7.84□□□□□ -1.15
PRPF8-204ENST00000572445 NPR3P17342 541 aa7.84□□□□□ -1.15
PRPF8-204ENST00000572445 EN2P19622 333 aaPredicted RBP7.84□□□□□ -1.15
PRPF8-204ENST00000572445 MPSTP25325 297 aa7.84□□□□□ -1.15
PRPF8-204ENST00000572445 ZEB1P37275 1124 aaPredicted RBP7.84□□□□□ -1.15
PRPF8-204ENST00000572445 TM4SF4P48230 202 aa7.84□□□□□ -1.15
PRPF8-204ENST00000572445 SUPT20HL1Q3ZLR7 823 aa7.84□□□□□ -1.15
PRPF8-204ENST00000572445 PIK3R5Q8WYR1 880 aa7.84□□□□□ -1.15
PRPF8-204ENST00000572445 ERO1AQ96HE7 468 aa7.84□□□□□ -1.15
PRPF8-204ENST00000572445 WRNIP1Q96S55 665 aa7.84□□□□□ -1.15
PRPF8-204ENST00000572445 RBCK1Q9BYM8 510 aa7.84□□□□□ -1.15
PRPF8-204ENST00000572445 ARHGAP39Q9C0H5 1083 aa7.84□□□□□ -1.15
PRPF8-204ENST00000572445 EFCC1Q9HA90 598 aa7.84□□□□□ -1.15
PRPF8-204ENST00000572445 TMOD2Q9NZR1 351 aa7.84□□□□□ -1.15
PRPF8-204ENST00000572445 CSADQ9Y600 493 aa7.84□□□□□ -1.15
PRPF8-204ENST00000572445 PTCH2Q9Y6C5 1203 aa7.84□□□□□ -1.15
PRPF8-204ENST00000572445 TRIOBPQ9H2D6 2365 aa7.84□□□□□ -1.15
PRPF8-204ENST00000572445 MGAMO43451 1857 aa7.83□□□□□ -1.16
PRPF8-204ENST00000572445 SOWAHBA6NEL2 793 aa7.83□□□□□ -1.16
PRPF8-204ENST00000572445 ESPNB1AK53 854 aa7.83□□□□□ -1.16
PRPF8-204ENST00000572445 SCAMP3O14828 347 aaKnown RBP7.83□□□□□ -1.16
PRPF8-204ENST00000572445 TREHO43280 583 aa7.83□□□□□ -1.16
PRPF8-204ENST00000572445 STAU1O95793 577 aaKnown RBP7.83□□□□□ -1.16
PRPF8-204ENST00000572445 ALDH1A1P00352 501 aa7.83□□□□□ -1.16
PRPF8-204ENST00000572445 ZBTB48P10074 688 aaPredicted RBP7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms