RNA–Protein interactions for RNA: ENST00000572438.1

CHRNE-202, Transcript of cholinergic receptor nicotinic epsilon subunit, humanhuman

TSL 5

Gene CHRNE, Length 1,847 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNE-202ENST00000572438 PLIN4Q96Q06 1357 aa23.85■■□□□ 1.41
CHRNE-202ENST00000572438 PLEKHA8P1O95397 391 aa23.84■■□□□ 1.41
CHRNE-202ENST00000572438 GUCY1A2P33402 732 aa23.84■■□□□ 1.41
CHRNE-202ENST00000572438 KIF23Q02241 960 aaPredicted RBP23.84■■□□□ 1.41
CHRNE-202ENST00000572438 BRAPQ7Z569 592 aa23.84■■□□□ 1.41
CHRNE-202ENST00000572438 ZFPM1Q8IX07 1006 aa23.84■■□□□ 1.41
CHRNE-202ENST00000572438 ZNF396Q96N95 335 aaPredicted RBP23.84■■□□□ 1.41
CHRNE-202ENST00000572438 DHX36Q9H2U1 1008 aaKnown RBP23.84■■□□□ 1.41
CHRNE-202ENST00000572438 HDAC9Q9UKV0 1011 aa23.84■■□□□ 1.41
CHRNE-202ENST00000572438 BCS1LQ9Y276 419 aa23.84■■□□□ 1.41
CHRNE-202ENST00000572438 NFKBIEO00221 500 aa23.84■■□□□ 1.41
CHRNE-202ENST00000572438 KIF5BP33176 963 aa23.84■■□□□ 1.41
CHRNE-202ENST00000572438 LEO1Q8WVC0 666 aaPredicted RBP23.84■■□□□ 1.41
CHRNE-202ENST00000572438 STX8Q9UNK0 236 aa23.84■■□□□ 1.41
CHRNE-202ENST00000572438 PRPF3O43395 683 aaKnown RBP23.83■■□□□ 1.41
CHRNE-202ENST00000572438 AKAP17AQ02040 695 aaKnown RBP23.83■■□□□ 1.41
CHRNE-202ENST00000572438 AGBL3Q8NEM8 1001 aa23.83■■□□□ 1.41
CHRNE-202ENST00000572438 PRMT6Q96LA8 375 aaPredicted RBP23.83■■□□□ 1.41
CHRNE-202ENST00000572438 TMEM47Q9BQJ4 181 aa23.83■■□□□ 1.41
CHRNE-202ENST00000572438 TDRD3Q9H7E2 651 aaKnown RBP23.83■■□□□ 1.41
CHRNE-202ENST00000572438 SRCAPQ6ZRS2 3230 aa23.83■■□□□ 1.41
CHRNE-202ENST00000572438 FER1L6Q2WGJ9 1857 aa23.82■■□□□ 1.4
CHRNE-202ENST00000572438 OGFOD1Q8N543 542 aa23.82■■□□□ 1.4
CHRNE-202ENST00000572438 JDP2Q8WYK2 163 aa23.82■■□□□ 1.4
CHRNE-202ENST00000572438 SPON1Q9HCB6 807 aa23.82■■□□□ 1.4
CHRNE-202ENST00000572438 SHMT1P34896 483 aa23.82■■□□□ 1.4
CHRNE-202ENST00000572438 NOVP48745 357 aa23.82■■□□□ 1.4
CHRNE-202ENST00000572438 CXCL9Q07325 125 aa23.82■■□□□ 1.4
CHRNE-202ENST00000572438 TCP10Q12799 353 aa23.82■■□□□ 1.4
CHRNE-202ENST00000572438 RBM27Q9P2N5 1060 aaKnown RBP23.82■■□□□ 1.4
CHRNE-202ENST00000572438 TAOK2Q9UL54 1235 aa23.82■■□□□ 1.4
CHRNE-202ENST00000572438 ZBTB12Q9Y330 459 aaPredicted RBP23.82■■□□□ 1.4
CHRNE-202ENST00000572438 SPDYE2BA6NHP3 402 aa23.81■■□□□ 1.4
CHRNE-202ENST00000572438 KIF28PB7ZC32 967 aa23.81■■□□□ 1.4
CHRNE-202ENST00000572438 ENTPD3O75355 529 aa23.81■■□□□ 1.4
CHRNE-202ENST00000572438 SPDYE6P0CI01 402 aa23.81■■□□□ 1.4
CHRNE-202ENST00000572438 GRM4Q14833 912 aa23.81■■□□□ 1.4
CHRNE-202ENST00000572438 SRBD1Q8N5C6 995 aaKnown RBP23.81■■□□□ 1.4
CHRNE-202ENST00000572438 CEP95Q96GE4 821 aa23.81■■□□□ 1.4
CHRNE-202ENST00000572438 GNL3Q9BVP2 549 aaKnown RBP eCLIP23.81■■□□□ 1.4
CHRNE-202ENST00000572438 TMEM63CQ9P1W3 806 aa23.81■■□□□ 1.4
CHRNE-202ENST00000572438 CNTNAP5Q8WYK1 1306 aa23.81■■□□□ 1.4
CHRNE-202ENST00000572438 AKR1B1P15121 316 aa23.8■■□□□ 1.4
CHRNE-202ENST00000572438 USP28Q96RU2 1077 aa23.8■■□□□ 1.4
CHRNE-202ENST00000572438 PI4KBQ9UBF8 816 aa23.8■■□□□ 1.4
CHRNE-202ENST00000572438 V9GY48 417 aaPredicted RBP23.8■■□□□ 1.4
CHRNE-202ENST00000572438 GOLGB1Q14789 3259 aaKnown RBP23.8■■□□□ 1.4
CHRNE-202ENST00000572438 LTBP3Q9NS15 1303 aa23.8■■□□□ 1.4
CHRNE-202ENST00000572438 DDTLA6NHG4 134 aaPredicted RBP23.8■■□□□ 1.4
CHRNE-202ENST00000572438 DLGAP5Q15398 846 aa23.8■■□□□ 1.4
CHRNE-202ENST00000572438 PKN1Q16512 942 aa23.8■■□□□ 1.4
CHRNE-202ENST00000572438 ZSCAN23Q3MJ62 389 aa23.8■■□□□ 1.4
CHRNE-202ENST00000572438 SH3BP5LQ7L8J4 393 aa23.8■■□□□ 1.4
CHRNE-202ENST00000572438 SYAP1Q96A49 352 aaPredicted RBP23.8■■□□□ 1.4
CHRNE-202ENST00000572438 RCOR1Q9UKL0 485 aa23.8■■□□□ 1.4
CHRNE-202ENST00000572438 MMP1P03956 469 aa23.79■■□□□ 1.4
CHRNE-202ENST00000572438 TOP1P11387 765 aaKnown RBP23.79■■□□□ 1.4
CHRNE-202ENST00000572438 MYSM1Q5VVJ2 828 aa23.79■■□□□ 1.4
CHRNE-202ENST00000572438 CIAPIN1Q6FI81 312 aa23.79■■□□□ 1.4
CHRNE-202ENST00000572438 ZSCAN29Q8IWY8 852 aaPredicted RBP23.79■■□□□ 1.4
CHRNE-202ENST00000572438 COL2A1P02458 1487 aaPredicted RBP23.78■■□□□ 1.4
CHRNE-202ENST00000572438 ATRNL1Q5VV63 1379 aa23.78■■□□□ 1.4
CHRNE-202ENST00000572438 IGKV6D-41A0A0C4DH26 115 aa23.78■■□□□ 1.4
CHRNE-202ENST00000572438 U2AF2P26368 475 aaKnown RBP eCLIP23.78■■□□□ 1.4
CHRNE-202ENST00000572438 GNAQP50148 359 aa23.78■■□□□ 1.4
CHRNE-202ENST00000572438 MTMR4Q9NYA4 1195 aa23.78■■□□□ 1.4
CHRNE-202ENST00000572438 TMOD2Q9NZR1 351 aa23.78■■□□□ 1.4
CHRNE-202ENST00000572438 MYH15Q9Y2K3 1946 aa23.78■■□□□ 1.4
CHRNE-202ENST00000572438 CEBPZQ03701 1054 aaKnown RBP23.77■■□□□ 1.4
CHRNE-202ENST00000572438 GNL2Q13823 731 aaKnown RBP23.77■■□□□ 1.4
CHRNE-202ENST00000572438 SAFBQ15424 915 aaKnown RBP eCLIP23.77■■□□□ 1.4
CHRNE-202ENST00000572438 NLGN2Q8NFZ4 835 aa23.77■■□□□ 1.4
CHRNE-202ENST00000572438 FTOQ9C0B1 505 aaKnown RBP eCLIP23.77■■□□□ 1.4
CHRNE-202ENST00000572438 DNAJC18Q9H819 358 aa23.77■■□□□ 1.4
CHRNE-202ENST00000572438 MAD2L2Q9UI95 211 aa23.77■■□□□ 1.4
CHRNE-202ENST00000572438 XBP1P17861 261 aa23.77■■□□□ 1.4
CHRNE-202ENST00000572438 FOXP4Q8IVH2 680 aaPredicted RBP23.77■■□□□ 1.4
CHRNE-202ENST00000572438 MTMR14Q8NCE2 650 aa23.77■■□□□ 1.4
CHRNE-202ENST00000572438 CCDC17Q96LX7 622 aa23.77■■□□□ 1.4
CHRNE-202ENST00000572438 RTEL1Q9NZ71 1219 aa23.77■■□□□ 1.4
CHRNE-202ENST00000572438 GOLGA6L4A6NEF3 574 aa23.76■■□□□ 1.39
CHRNE-202ENST00000572438 ZNF445P59923 1031 aa23.76■■□□□ 1.39
CHRNE-202ENST00000572438 TNIP1Q15025 636 aa23.76■■□□□ 1.39
CHRNE-202ENST00000572438 TPRNQ4KMQ1 711 aa23.76■■□□□ 1.39
CHRNE-202ENST00000572438 KCNJ14Q9UNX9 436 aa23.76■■□□□ 1.39
CHRNE-202ENST00000572438 hCG_1642624A0A1W2PR95 340 aa23.75■■□□□ 1.39
CHRNE-202ENST00000572438 FSD2A1L4K1 749 aa23.75■■□□□ 1.39
CHRNE-202ENST00000572438 PALM3A6NDB9 673 aaPredicted RBP23.75■■□□□ 1.39
CHRNE-202ENST00000572438 STAG2Q8N3U4 1231 aa23.75■■□□□ 1.39
CHRNE-202ENST00000572438 ZNF70Q9UC06 446 aaPredicted RBP23.75■■□□□ 1.39
CHRNE-202ENST00000572438 ISY1Q9ULR0 285 aaKnown RBP23.75■■□□□ 1.39
CHRNE-202ENST00000572438 GOLGA6L3A6NEY3 463 aa23.75■■□□□ 1.39
CHRNE-202ENST00000572438 METTL16Q86W50 562 aaKnown RBP23.75■■□□□ 1.39
CHRNE-202ENST00000572438 DIS3L2Q8IYB7 885 aaKnown RBP23.75■■□□□ 1.39
CHRNE-202ENST00000572438 LZTS2Q9BRK4 669 aa23.75■■□□□ 1.39
CHRNE-202ENST00000572438 TRIM34Q9BYJ4 488 aa23.75■■□□□ 1.39
CHRNE-202ENST00000572438 FOXP1Q9H334 677 aaPredicted RBP23.75■■□□□ 1.39
CHRNE-202ENST00000572438 POLR3EQ9NVU0 708 aa23.75■■□□□ 1.39
CHRNE-202ENST00000572438 SIPA1L1O43166 1804 aa23.74■■□□□ 1.39
CHRNE-202ENST00000572438 SPDYE2Q495Y8 402 aa23.74■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms