RNA–Protein interactions for RNA: ENST00000571947.5

TRAPPC1-204, Transcript of trafficking protein particle complex 1, humanhuman

TSL 3

Gene TRAPPC1, Length 306 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-204ENST00000571947 COL2A1P02458 1487 aaPredicted RBP7.12□□□□□ -1.27
TRAPPC1-204ENST00000571947 GOLGA6L3A6NEY3 463 aa7.12□□□□□ -1.27
TRAPPC1-204ENST00000571947 PRPF3O43395 683 aaKnown RBP7.12□□□□□ -1.27
TRAPPC1-204ENST00000571947 TSPY3P0CV98 308 aa7.12□□□□□ -1.27
TRAPPC1-204ENST00000571947 TSPY8P0CW00 308 aa7.12□□□□□ -1.27
TRAPPC1-204ENST00000571947 GABPAQ06546 454 aa7.12□□□□□ -1.27
TRAPPC1-204ENST00000571947 FUT2Q10981 343 aa7.12□□□□□ -1.27
TRAPPC1-204ENST00000571947 PICALMQ13492 652 aa7.12□□□□□ -1.27
TRAPPC1-204ENST00000571947 GRM4Q14833 912 aa7.12□□□□□ -1.27
TRAPPC1-204ENST00000571947 TMTC3Q6ZXV5 915 aa7.12□□□□□ -1.27
TRAPPC1-204ENST00000571947 CTCFLQ8NI51 663 aaPredicted RBP7.12□□□□□ -1.27
TRAPPC1-204ENST00000571947 USP28Q96RU2 1077 aa7.12□□□□□ -1.27
TRAPPC1-204ENST00000571947 IDI2Q9BXS1 227 aa7.12□□□□□ -1.27
TRAPPC1-204ENST00000571947 KAT14Q9H8E8 782 aa7.12□□□□□ -1.27
TRAPPC1-204ENST00000571947 DDX4Q9NQI0 724 aaKnown RBP7.12□□□□□ -1.27
TRAPPC1-204ENST00000571947 GJB4Q9NTQ9 266 aa7.12□□□□□ -1.27
TRAPPC1-204ENST00000571947 SWAP70Q9UH65 585 aa7.12□□□□□ -1.27
TRAPPC1-204ENST00000571947 SERPINA10Q9UK55 444 aa7.12□□□□□ -1.27
TRAPPC1-204ENST00000571947 TAOK2Q9UL54 1235 aa7.12□□□□□ -1.27
TRAPPC1-204ENST00000571947 SMCHD1A6NHR9 2005 aa7.11□□□□□ -1.27
TRAPPC1-204ENST00000571947 CNTNAP5Q8WYK1 1306 aa7.11□□□□□ -1.27
TRAPPC1-204ENST00000571947 KIF28PB7ZC32 967 aa7.11□□□□□ -1.27
TRAPPC1-204ENST00000571947 LETM1O95202 739 aaPredicted RBP7.11□□□□□ -1.27
TRAPPC1-204ENST00000571947 PLEKHA8P1O95397 391 aa7.11□□□□□ -1.27
TRAPPC1-204ENST00000571947 YEATS4O95619 227 aa7.11□□□□□ -1.27
TRAPPC1-204ENST00000571947 MMP1P03956 469 aa7.11□□□□□ -1.27
TRAPPC1-204ENST00000571947 HLA-DOAP06340 250 aa7.11□□□□□ -1.27
TRAPPC1-204ENST00000571947 VIL1P09327 827 aaKnown RBP7.11□□□□□ -1.27
TRAPPC1-204ENST00000571947 U2AF2P26368 475 aaKnown RBP eCLIP7.11□□□□□ -1.27
TRAPPC1-204ENST00000571947 KIF5BP33176 963 aa7.11□□□□□ -1.27
TRAPPC1-204ENST00000571947 GUCY1A2P33402 732 aa7.11□□□□□ -1.27
TRAPPC1-204ENST00000571947 NOVP48745 357 aa7.11□□□□□ -1.27
TRAPPC1-204ENST00000571947 GNAQP50148 359 aa7.11□□□□□ -1.27
TRAPPC1-204ENST00000571947 AKAP17AQ02040 695 aaKnown RBP7.11□□□□□ -1.27
TRAPPC1-204ENST00000571947 PKN1Q16512 942 aa7.11□□□□□ -1.27
TRAPPC1-204ENST00000571947 CFAP100Q494V2 611 aa7.11□□□□□ -1.27
TRAPPC1-204ENST00000571947 DALRD3Q5D0E6 543 aaKnown RBP7.11□□□□□ -1.27
TRAPPC1-204ENST00000571947 CCDC183Q5T5S1 534 aa7.11□□□□□ -1.27
TRAPPC1-204ENST00000571947 MYSM1Q5VVJ2 828 aa7.11□□□□□ -1.27
TRAPPC1-204ENST00000571947 RSBN1LQ6PCB5 846 aaPredicted RBP7.11□□□□□ -1.27
TRAPPC1-204ENST00000571947 GAS2L3Q86XJ1 694 aa7.11□□□□□ -1.27
TRAPPC1-204ENST00000571947 CMTR1Q8N1G2 835 aaKnown RBP7.11□□□□□ -1.27
TRAPPC1-204ENST00000571947 KLHL34Q8N239 644 aa7.11□□□□□ -1.27
TRAPPC1-204ENST00000571947 LARGE2Q8N3Y3 721 aa7.11□□□□□ -1.27
TRAPPC1-204ENST00000571947 PNMA1Q8ND90 353 aa7.11□□□□□ -1.27
TRAPPC1-204ENST00000571947 PGBD1Q96JS3 809 aa7.11□□□□□ -1.27
TRAPPC1-204ENST00000571947 SGIP1Q9BQI5 828 aa7.11□□□□□ -1.27
TRAPPC1-204ENST00000571947 TMEM47Q9BQJ4 181 aa7.11□□□□□ -1.27
TRAPPC1-204ENST00000571947 GNL3Q9BVP2 549 aaKnown RBP eCLIP7.11□□□□□ -1.27
TRAPPC1-204ENST00000571947 EHD4Q9H223 541 aa7.11□□□□□ -1.27
TRAPPC1-204ENST00000571947 RTEL1Q9NZ71 1219 aa7.11□□□□□ -1.27
TRAPPC1-204ENST00000571947 PARP14Q460N5 1801 aa7.11□□□□□ -1.27
TRAPPC1-204ENST00000571947 IGKV6D-41A0A0C4DH26 115 aa7.1□□□□□ -1.27
TRAPPC1-204ENST00000571947 GOLGA6L4A6NEF3 574 aa7.1□□□□□ -1.27
TRAPPC1-204ENST00000571947 UBE2Q2LH0YL09 131 aa7.1□□□□□ -1.27
TRAPPC1-204ENST00000571947 ENTPD3O75355 529 aa7.1□□□□□ -1.27
TRAPPC1-204ENST00000571947 TOP1P11387 765 aaKnown RBP7.1□□□□□ -1.27
TRAPPC1-204ENST00000571947 XBP1P17861 261 aa7.1□□□□□ -1.27
TRAPPC1-204ENST00000571947 SHMT1P34896 483 aa7.1□□□□□ -1.27
TRAPPC1-204ENST00000571947 NASPP49321 788 aaPredicted RBP7.1□□□□□ -1.27
TRAPPC1-204ENST00000571947 MRE11P49959 708 aa7.1□□□□□ -1.27
TRAPPC1-204ENST00000571947 RBM5P52756 815 aaKnown RBP eCLIP7.1□□□□□ -1.27
TRAPPC1-204ENST00000571947 NFIAQ12857 509 aa7.1□□□□□ -1.27
TRAPPC1-204ENST00000571947 R3HDM1Q15032 1099 aaKnown RBP7.1□□□□□ -1.27
TRAPPC1-204ENST00000571947 STK38Q15208 465 aa7.1□□□□□ -1.27
TRAPPC1-204ENST00000571947 SAFBQ15424 915 aaKnown RBP eCLIP7.1□□□□□ -1.27
TRAPPC1-204ENST00000571947 LRSAM1Q6UWE0 723 aa7.1□□□□□ -1.27
TRAPPC1-204ENST00000571947 NIM1KQ8IY84 436 aa7.1□□□□□ -1.27
TRAPPC1-204ENST00000571947 CCDC82Q8N4S0 544 aa7.1□□□□□ -1.27
TRAPPC1-204ENST00000571947 SRBD1Q8N5C6 995 aaKnown RBP7.1□□□□□ -1.27
TRAPPC1-204ENST00000571947 UPF1Q92900 1129 aaKnown RBP eCLIP7.1□□□□□ -1.27
TRAPPC1-204ENST00000571947 GMLQ99445 158 aa7.1□□□□□ -1.27
TRAPPC1-204ENST00000571947 DHX36Q9H2U1 1008 aaKnown RBP7.1□□□□□ -1.27
TRAPPC1-204ENST00000571947 FOXP1Q9H334 677 aaPredicted RBP7.1□□□□□ -1.27
TRAPPC1-204ENST00000571947 GRPEL1Q9HAV7 217 aa7.1□□□□□ -1.27
TRAPPC1-204ENST00000571947 ZNF277Q9NRM2 450 aaPredicted RBP7.1□□□□□ -1.27
TRAPPC1-204ENST00000571947 POLR3EQ9NVU0 708 aa7.1□□□□□ -1.27
TRAPPC1-204ENST00000571947 FAM198AQ9UFP1 575 aa7.1□□□□□ -1.27
TRAPPC1-204ENST00000571947 SERPINB13Q9UIV8 391 aa7.1□□□□□ -1.27
TRAPPC1-204ENST00000571947 HDAC9Q9UKV0 1011 aa7.1□□□□□ -1.27
TRAPPC1-204ENST00000571947 ZNRF3Q9ULT6 936 aa7.1□□□□□ -1.27
TRAPPC1-204ENST00000571947 PCDHAC2Q9Y5I4 1007 aa7.1□□□□□ -1.27
TRAPPC1-204ENST00000571947 CD2APQ9Y5K6 639 aa7.1□□□□□ -1.27
TRAPPC1-204ENST00000571947 V9GY48 417 aaPredicted RBP7.1□□□□□ -1.27
TRAPPC1-204ENST00000571947 DOCK1Q14185 1865 aa7.1□□□□□ -1.27
TRAPPC1-204ENST00000571947 ATRNL1Q5VV63 1379 aa7.09□□□□□ -1.27
TRAPPC1-204ENST00000571947 LTBP3Q9NS15 1303 aa7.09□□□□□ -1.27
TRAPPC1-204ENST00000571947 PHIPQ8WWQ0 1821 aa7.09□□□□□ -1.27
TRAPPC1-204ENST00000571947 SYCE3A1L190 88 aa7.09□□□□□ -1.27
TRAPPC1-204ENST00000571947 PALM3A6NDB9 673 aaPredicted RBP7.09□□□□□ -1.27
TRAPPC1-204ENST00000571947 PSMD14O00487 310 aa7.09□□□□□ -1.27
TRAPPC1-204ENST00000571947 RAD17O75943 681 aa7.09□□□□□ -1.27
TRAPPC1-204ENST00000571947 SCG2P13521 617 aa7.09□□□□□ -1.27
TRAPPC1-204ENST00000571947 AKR1B1P15121 316 aa7.09□□□□□ -1.27
TRAPPC1-204ENST00000571947 LIG1P18858 919 aa7.09□□□□□ -1.27
TRAPPC1-204ENST00000571947 SMARCA1P28370 1054 aa7.09□□□□□ -1.27
TRAPPC1-204ENST00000571947 CEBPZQ03701 1054 aaKnown RBP7.09□□□□□ -1.27
TRAPPC1-204ENST00000571947 GNL2Q13823 731 aaKnown RBP7.09□□□□□ -1.27
TRAPPC1-204ENST00000571947 PFKFB3Q16875 520 aaPredicted RBP7.09□□□□□ -1.27
TRAPPC1-204ENST00000571947 ANO1Q5XXA6 986 aa7.09□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms