RNA–Protein interactions for RNA: ENST00000571252.2

PCDHGA4-201, Transcript of protocadherin gamma subfamily A, 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGA4, Length 4,778 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA4-201ENST00000571252 SPATA1Q5VX52 437 aa12.48□□□□□ -0.41
PCDHGA4-201ENST00000571252 ARFGAP2Q8N6H7 521 aa12.48□□□□□ -0.41
PCDHGA4-201ENST00000571252 SPATA5Q8NB90 893 aa12.48□□□□□ -0.41
PCDHGA4-201ENST00000571252 OR8K1Q8NGG5 319 aa12.48□□□□□ -0.41
PCDHGA4-201ENST00000571252 OSBP2Q969R2 916 aa12.48□□□□□ -0.41
PCDHGA4-201ENST00000571252 ZNF219Q9P2Y4 722 aaPredicted RBP12.48□□□□□ -0.41
PCDHGA4-201ENST00000571252 VGLL3A8MV65 326 aa12.48□□□□□ -0.41
PCDHGA4-201ENST00000571252 GCOM1H8Y6P7 765 aaPredicted RBP12.48□□□□□ -0.41
PCDHGA4-201ENST00000571252 MYZAPP0CAP1 466 aa12.48□□□□□ -0.41
PCDHGA4-201ENST00000571252 SSR1P43307 286 aaKnown RBP12.48□□□□□ -0.41
PCDHGA4-201ENST00000571252 WHAMMP3Q1A5X7 153 aa12.48□□□□□ -0.41
PCDHGA4-201ENST00000571252 GSTTP1A0A1W2PQM5 241 aa12.48□□□□□ -0.41
PCDHGA4-201ENST00000571252 RABEP2Q9H5N1 569 aa12.48□□□□□ -0.41
PCDHGA4-201ENST00000571252 RGPD8O14715 1765 aaPredicted RBP12.47□□□□□ -0.41
PCDHGA4-201ENST00000571252 ATP8B1O43520 1251 aa12.47□□□□□ -0.41
PCDHGA4-201ENST00000571252 IFNL3Q8IZI9 196 aa12.47□□□□□ -0.41
PCDHGA4-201ENST00000571252 TAOK3Q9H2K8 898 aa12.47□□□□□ -0.41
PCDHGA4-201ENST00000571252 CDC23Q9UJX2 597 aa12.47□□□□□ -0.41
PCDHGA4-201ENST00000571252 SAR1BQ9Y6B6 198 aa12.47□□□□□ -0.41
PCDHGA4-201ENST00000571252 ARHGAP23Q9P227 1491 aa12.47□□□□□ -0.41
PCDHGA4-201ENST00000571252 GOLGA6BA6NDN3 693 aa12.47□□□□□ -0.41
PCDHGA4-201ENST00000571252 USP27XA6NNY8 438 aa12.47□□□□□ -0.41
PCDHGA4-201ENST00000571252 NDUFAB1O14561 156 aa12.47□□□□□ -0.41
PCDHGA4-201ENST00000571252 CYP27B1O15528 508 aa12.47□□□□□ -0.41
PCDHGA4-201ENST00000571252 GNA11P29992 359 aa12.47□□□□□ -0.41
PCDHGA4-201ENST00000571252 FANCBQ8NB91 859 aa12.47□□□□□ -0.41
PCDHGA4-201ENST00000571252 CHGBP05060 677 aa12.47□□□□□ -0.41
PCDHGA4-201ENST00000571252 KIAA0753Q2KHM9 967 aa12.47□□□□□ -0.41
PCDHGA4-201ENST00000571252 C8orf74Q6P047 294 aa12.47□□□□□ -0.41
PCDHGA4-201ENST00000571252 SRGAP1Q7Z6B7 1085 aa12.47□□□□□ -0.41
PCDHGA4-201ENST00000571252 SECISBP2LQ93073 1101 aaKnown RBP12.47□□□□□ -0.41
PCDHGA4-201ENST00000571252 PSMB7Q99436 277 aa12.47□□□□□ -0.41
PCDHGA4-201ENST00000571252 GJB4Q9NTQ9 266 aa12.47□□□□□ -0.41
PCDHGA4-201ENST00000571252 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.47□□□□□ -0.41
PCDHGA4-201ENST00000571252 PXDNLA1KZ92 1463 aa12.47□□□□□ -0.41
PCDHGA4-201ENST00000571252 SLIT1O75093 1534 aa12.47□□□□□ -0.41
PCDHGA4-201ENST00000571252 M0R2C6 588 aa12.46□□□□□ -0.41
PCDHGA4-201ENST00000571252 PNMA6AP0CW24 399 aaPredicted RBP12.46□□□□□ -0.41
PCDHGA4-201ENST00000571252 ATP6V1AP38606 617 aa12.46□□□□□ -0.41
PCDHGA4-201ENST00000571252 DDB1Q16531 1140 aa12.46□□□□□ -0.41
PCDHGA4-201ENST00000571252 LONRF2Q1L5Z9 754 aa12.46□□□□□ -0.41
PCDHGA4-201ENST00000571252 AIFM3Q96NN9 605 aa12.46□□□□□ -0.41
PCDHGA4-201ENST00000571252 NUP58Q9BVL2 599 aa12.46□□□□□ -0.41
PCDHGA4-201ENST00000571252 PPP1R2P41236 205 aa12.46□□□□□ -0.41
PCDHGA4-201ENST00000571252 SND1Q7KZF4 910 aaKnown RBP eCLIP12.46□□□□□ -0.412e-7■■■■■ 27.3
PCDHGA4-201ENST00000571252 NBPF5PQ86XG9 351 aaPredicted RBP12.46□□□□□ -0.41
PCDHGA4-201ENST00000571252 KAZALD1Q96I82 304 aa12.46□□□□□ -0.41
PCDHGA4-201ENST00000571252 NLRP3Q96P20 1036 aa12.46□□□□□ -0.41
PCDHGA4-201ENST00000571252 GOLPH3LQ9H4A5 285 aa12.46□□□□□ -0.41
PCDHGA4-201ENST00000571252 PDE11AQ9HCR9 933 aa12.46□□□□□ -0.41
PCDHGA4-201ENST00000571252 MKRN1Q9UHC7 482 aaKnown RBP12.46□□□□□ -0.41
PCDHGA4-201ENST00000571252 SLFNL1Q499Z3 407 aa12.46□□□□□ -0.41
PCDHGA4-201ENST00000571252 KMT5BQ4FZB7 885 aa12.46□□□□□ -0.41
PCDHGA4-201ENST00000571252 VSTM4Q8IW00 320 aa12.46□□□□□ -0.41
PCDHGA4-201ENST00000571252 MAGEA1P43355 309 aa12.46□□□□□ -0.42
PCDHGA4-201ENST00000571252 CETN1Q12798 172 aa12.46□□□□□ -0.42
PCDHGA4-201ENST00000571252 PXDNQ92626 1479 aa12.45□□□□□ -0.42
PCDHGA4-201ENST00000571252 GOLGA6L10A0A0M3HER8 536 aa12.45□□□□□ -0.42
PCDHGA4-201ENST00000571252 TNNI2P48788 182 aa12.45□□□□□ -0.42
PCDHGA4-201ENST00000571252 TNNC1P63316 161 aa12.45□□□□□ -0.42
PCDHGA4-201ENST00000571252 TTLL12Q14166 644 aaPredicted RBP12.45□□□□□ -0.42
PCDHGA4-201ENST00000571252 TRAF5O00463 557 aa12.45□□□□□ -0.42
PCDHGA4-201ENST00000571252 GSTO1P78417 241 aa12.45□□□□□ -0.42
PCDHGA4-201ENST00000571252 WDR78Q5VTH9 848 aa12.45□□□□□ -0.42
PCDHGA4-201ENST00000571252 SV2BQ7L1I2 683 aa12.45□□□□□ -0.42
PCDHGA4-201ENST00000571252 FMR1NBQ8N0W7 255 aaPredicted RBP12.45□□□□□ -0.42
PCDHGA4-201ENST00000571252 FBXO3Q9UK99 471 aa12.45□□□□□ -0.42
PCDHGA4-201ENST00000571252 JAG2Q9Y219 1238 aa12.45□□□□□ -0.42
PCDHGA4-201ENST00000571252 TAF6LQ9Y6J9 622 aa12.45□□□□□ -0.42
PCDHGA4-201ENST00000571252 TMEM94Q12767 1356 aa12.45□□□□□ -0.42
PCDHGA4-201ENST00000571252 PIK3C2AO00443 1686 aa12.45□□□□□ -0.42
PCDHGA4-201ENST00000571252 KCNJ18B7U540 433 aa12.45□□□□□ -0.42
PCDHGA4-201ENST00000571252 ERCC5P28715 1186 aaPredicted RBP12.45□□□□□ -0.42
PCDHGA4-201ENST00000571252 CETN2P41208 172 aa12.45□□□□□ -0.42
PCDHGA4-201ENST00000571252 KCNJ12Q14500 433 aa12.45□□□□□ -0.42
PCDHGA4-201ENST00000571252 TNIP1Q15025 636 aa12.45□□□□□ -0.42
PCDHGA4-201ENST00000571252 GPIHBP1Q8IV16 184 aa12.45□□□□□ -0.42
PCDHGA4-201ENST00000571252 PLCD3Q8N3E9 789 aa12.45□□□□□ -0.42
PCDHGA4-201ENST00000571252 RRP36Q96EU6 259 aaKnown RBP12.45□□□□□ -0.42
PCDHGA4-201ENST00000571252 C8orf37Q96NL8 207 aa12.45□□□□□ -0.42
PCDHGA4-201ENST00000571252 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.45□□□□□ -0.42
PCDHGA4-201ENST00000571252 CCDC151A5D8V7 595 aa12.45□□□□□ -0.42
PCDHGA4-201ENST00000571252 TBCAO75347 108 aaKnown RBP12.45□□□□□ -0.42
PCDHGA4-201ENST00000571252 CASP14P31944 242 aa12.45□□□□□ -0.42
PCDHGA4-201ENST00000571252 PDIA6Q15084 440 aa12.45□□□□□ -0.42
PCDHGA4-201ENST00000571252 CCDC121Q6ZUS5 278 aa12.45□□□□□ -0.42
PCDHGA4-201ENST00000571252 SLC35F6Q8N357 371 aa12.45□□□□□ -0.42
PCDHGA4-201ENST00000571252 PPM1EQ8WY54 764 aa12.45□□□□□ -0.42
PCDHGA4-201ENST00000571252 CTNNBL1Q8WYA6 563 aaPredicted RBP12.45□□□□□ -0.42
PCDHGA4-201ENST00000571252 ZNF622Q969S3 477 aaKnown RBP eCLIP12.45□□□□□ -0.42
PCDHGA4-201ENST00000571252 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.45□□□□□ -0.42
PCDHGA4-201ENST00000571252 OSBPL5Q9H0X9 879 aaPredicted RBP12.45□□□□□ -0.42
PCDHGA4-201ENST00000571252 MORC3Q14149 939 aa12.44□□□□□ -0.42
PCDHGA4-201ENST00000571252 UBE3CQ15386 1083 aa12.44□□□□□ -0.42
PCDHGA4-201ENST00000571252 PI16Q6UXB8 463 aa12.44□□□□□ -0.42
PCDHGA4-201ENST00000571252 RPGRIP1Q96KN7 1286 aa12.44□□□□□ -0.42
PCDHGA4-201ENST00000571252 PARD6BQ9BYG5 372 aa12.44□□□□□ -0.42
PCDHGA4-201ENST00000571252 RNASE9P60153 205 aaKnown RBP12.44□□□□□ -0.42
PCDHGA4-201ENST00000571252 HAUS4Q9H6D7 363 aa12.44□□□□□ -0.42
PCDHGA4-201ENST00000571252 CNNM4Q6P4Q7 775 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms