RNA–Protein interactions for RNA: ENST00000570324.1

NPLOC4-204, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 3

Gene NPLOC4, Length 414 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-204ENST00000570324 NUDT12Q9BQG2 462 aa10.76□□□□□ -0.69
NPLOC4-204ENST00000570324 DCP1AQ9NPI6 582 aaPredicted RBP10.76□□□□□ -0.69
NPLOC4-204ENST00000570324 ATP8A2Q9NTI2 1148 aa10.76□□□□□ -0.69
NPLOC4-204ENST00000570324 ECHDC1Q9NTX5 307 aa10.76□□□□□ -0.69
NPLOC4-204ENST00000570324 ZBTB47Q9UFB7 747 aaPredicted RBP10.76□□□□□ -0.69
NPLOC4-204ENST00000570324 SWAP70Q9UH65 585 aa10.76□□□□□ -0.69
NPLOC4-204ENST00000570324 GLRX3O76003 335 aaKnown RBP10.75□□□□□ -0.69
NPLOC4-204ENST00000570324 SLC34A2O95436 690 aa10.75□□□□□ -0.69
NPLOC4-204ENST00000570324 HMGCRP04035 888 aa10.75□□□□□ -0.69
NPLOC4-204ENST00000570324 CYP2B6P20813 491 aa10.75□□□□□ -0.69
NPLOC4-204ENST00000570324 ERVK-9P63128 1117 aa10.75□□□□□ -0.69
NPLOC4-204ENST00000570324 ERVK-24P63145 666 aa10.75□□□□□ -0.69
NPLOC4-204ENST00000570324 SEPT2Q15019 361 aa10.75□□□□□ -0.69
NPLOC4-204ENST00000570324 UBE3CQ15386 1083 aa10.75□□□□□ -0.69
NPLOC4-204ENST00000570324 WDR78Q5VTH9 848 aa10.75□□□□□ -0.69
NPLOC4-204ENST00000570324 SOCS4Q8WXH5 440 aa10.75□□□□□ -0.69
NPLOC4-204ENST00000570324 C12orf42Q96LP6 360 aa10.75□□□□□ -0.69
NPLOC4-204ENST00000570324 KIAA1683Q9H0B3 1180 aa10.75□□□□□ -0.69
NPLOC4-204ENST00000570324 SLC4A4Q9Y6R1 1079 aa10.75□□□□□ -0.69
NPLOC4-204ENST00000570324 PRKAB2O43741 272 aa10.74□□□□□ -0.69
NPLOC4-204ENST00000570324 FARP2O94887 1054 aaPredicted RBP10.74□□□□□ -0.69
NPLOC4-204ENST00000570324 CYP2D6P10635 497 aa10.74□□□□□ -0.69
NPLOC4-204ENST00000570324 LRRFIP1Q32MZ4 808 aaKnown RBP10.74□□□□□ -0.69
NPLOC4-204ENST00000570324 CATSPERGQ6ZRH7 1159 aa10.74□□□□□ -0.69
NPLOC4-204ENST00000570324 TMEM179Q6ZVK1 233 aa10.74□□□□□ -0.69
NPLOC4-204ENST00000570324 TRMT44Q8IYL2 757 aaKnown RBP10.74□□□□□ -0.69
NPLOC4-204ENST00000570324 ACER1Q8TDN7 264 aa10.74□□□□□ -0.69
NPLOC4-204ENST00000570324 SHISA4Q96DD7 197 aa10.74□□□□□ -0.69
NPLOC4-204ENST00000570324 DYNLL2Q96FJ2 89 aa10.74□□□□□ -0.69
NPLOC4-204ENST00000570324 RPAP3Q9H6T3 665 aaPredicted RBP10.74□□□□□ -0.69
NPLOC4-204ENST00000570324 DCTPP1Q9H773 170 aa10.74□□□□□ -0.69
NPLOC4-204ENST00000570324 SH2D4AQ9H788 454 aa10.74□□□□□ -0.69
NPLOC4-204ENST00000570324 ARHGEF10LQ9HCE6 1279 aa10.74□□□□□ -0.69
NPLOC4-204ENST00000570324 HMX1Q9NP08 348 aaPredicted RBP10.74□□□□□ -0.69
NPLOC4-204ENST00000570324 RBPJLQ9UBG7 517 aa10.74□□□□□ -0.69
NPLOC4-204ENST00000570324 GJD2Q9UKL4 321 aa10.74□□□□□ -0.69
NPLOC4-204ENST00000570324 RABGAP1Q9Y3P9 1069 aa10.74□□□□□ -0.69
NPLOC4-204ENST00000570324 USP17L12C9JPN9 530 aa10.73□□□□□ -0.69
NPLOC4-204ENST00000570324 USP17L21D6R901 530 aa10.73□□□□□ -0.69
NPLOC4-204ENST00000570324 PEX10O60683 326 aa10.73□□□□□ -0.69
NPLOC4-204ENST00000570324 VCAM1P19320 739 aa10.73□□□□□ -0.69
NPLOC4-204ENST00000570324 RGS2P41220 211 aa10.73□□□□□ -0.69
NPLOC4-204ENST00000570324 ATP2B2Q01814 1243 aa10.73□□□□□ -0.69
NPLOC4-204ENST00000570324 GABPAQ06546 454 aa10.73□□□□□ -0.69
NPLOC4-204ENST00000570324 Q3C1V9 767 aa10.73□□□□□ -0.69
NPLOC4-204ENST00000570324 SLFNL1Q499Z3 407 aa10.73□□□□□ -0.69
NPLOC4-204ENST00000570324 PLEKHH3Q7Z736 793 aa10.73□□□□□ -0.69
NPLOC4-204ENST00000570324 CCDC17Q96LX7 622 aa10.73□□□□□ -0.69
NPLOC4-204ENST00000570324 TANGO6Q9C0B7 1094 aa10.73□□□□□ -0.69
NPLOC4-204ENST00000570324 XRN2Q9H0D6 950 aaKnown RBP eCLIP10.73□□□□□ -0.69
NPLOC4-204ENST00000570324 TXNRD2Q9NNW7 524 aa10.73□□□□□ -0.69
NPLOC4-204ENST00000570324 NR2E3Q9Y5X4 410 aa10.73□□□□□ -0.69
NPLOC4-204ENST00000570324 IVNS1ABPQ9Y6Y0 642 aa10.73□□□□□ -0.69
NPLOC4-204ENST00000570324 RPTORQ8N122 1335 aa10.73□□□□□ -0.69
NPLOC4-204ENST00000570324 MYH7P12883 1935 aa10.72□□□□□ -0.69
NPLOC4-204ENST00000570324 MYH8P13535 1937 aa10.72□□□□□ -0.69
NPLOC4-204ENST00000570324 DOCK3Q8IZD9 2030 aa10.72□□□□□ -0.69
NPLOC4-204ENST00000570324 H0YGN5 161 aa10.72□□□□□ -0.69
NPLOC4-204ENST00000570324 ERC2O15083 957 aa10.72□□□□□ -0.69
NPLOC4-204ENST00000570324 RAD21O60216 631 aa10.72□□□□□ -0.69
NPLOC4-204ENST00000570324 ZKSCAN1P17029 563 aaPredicted RBP10.72□□□□□ -0.69
NPLOC4-204ENST00000570324 ICA1Q05084 483 aa10.72□□□□□ -0.69
NPLOC4-204ENST00000570324 COG2Q14746 738 aa10.72□□□□□ -0.69
NPLOC4-204ENST00000570324 C12orf60Q5U649 245 aa10.72□□□□□ -0.69
NPLOC4-204ENST00000570324 SAMD1Q6SPF0 538 aaPredicted RBP10.72□□□□□ -0.69
NPLOC4-204ENST00000570324 GPR142Q7Z601 462 aa10.72□□□□□ -0.69
NPLOC4-204ENST00000570324 KBTBD3Q8NAB2 608 aa10.72□□□□□ -0.69
NPLOC4-204ENST00000570324 SLC44A5Q8NCS7 719 aa10.72□□□□□ -0.69
NPLOC4-204ENST00000570324 PUS7LQ9H0K6 701 aaKnown RBP10.72□□□□□ -0.69
NPLOC4-204ENST00000570324 PORCNQ9H237 461 aa10.72□□□□□ -0.69
NPLOC4-204ENST00000570324 HOXC10Q9NYD6 342 aa10.72□□□□□ -0.69
NPLOC4-204ENST00000570324 CYP2D7A0A087X1C5 515 aa10.71□□□□□ -0.69
NPLOC4-204ENST00000570324 MINDY4BA8MYZ0 360 aa10.71□□□□□ -0.69
NPLOC4-204ENST00000570324 RNF113AO15541 343 aaKnown RBP10.71□□□□□ -0.69
NPLOC4-204ENST00000570324 APPP05067 770 aa10.71□□□□□ -0.69
NPLOC4-204ENST00000570324 ZFYP08048 801 aaPredicted RBP10.71□□□□□ -0.69
NPLOC4-204ENST00000570324 XRCC5P13010 732 aaKnown RBP10.71□□□□□ -0.69
NPLOC4-204ENST00000570324 AKR1B1P15121 316 aa10.71□□□□□ -0.69
NPLOC4-204ENST00000570324 GUCY1A2P33402 732 aa10.71□□□□□ -0.69
NPLOC4-204ENST00000570324 CDK8P49336 464 aa10.71□□□□□ -0.69
NPLOC4-204ENST00000570324 EVX2Q03828 476 aa10.71□□□□□ -0.69
NPLOC4-204ENST00000570324 DDX60LQ5H9U9 1706 aaKnown RBP10.71□□□□□ -0.69
NPLOC4-204ENST00000570324 HABP4Q5JVS0 413 aaKnown RBP10.71□□□□□ -0.69
NPLOC4-204ENST00000570324 NECAB2Q7Z6G3 386 aa10.71□□□□□ -0.69
NPLOC4-204ENST00000570324 TRIB2Q92519 343 aa10.71□□□□□ -0.69
NPLOC4-204ENST00000570324 LPAR1Q92633 364 aa10.71□□□□□ -0.69
NPLOC4-204ENST00000570324 YTHDC1Q96MU7 727 aaKnown RBP10.71□□□□□ -0.69
NPLOC4-204ENST00000570324 MKNK2Q9HBH9 465 aa10.71□□□□□ -0.69
NPLOC4-204ENST00000570324 PAK6Q9NQU5 681 aaPredicted RBP10.71□□□□□ -0.69
NPLOC4-204ENST00000570324 ARPP21Q9UBL0 812 aaPredicted RBP10.71□□□□□ -0.69
NPLOC4-204ENST00000570324 BAZ2AQ9UIF9 1905 aaKnown RBP10.7□□□□□ -0.7
NPLOC4-204ENST00000570324 TTC41PQ6P2S7 1318 aa10.7□□□□□ -0.7
NPLOC4-204ENST00000570324 EVI5O60447 810 aa10.7□□□□□ -0.7
NPLOC4-204ENST00000570324 CHGBP05060 677 aa10.7□□□□□ -0.7
NPLOC4-204ENST00000570324 PRKAR2AP13861 404 aaKnown RBP10.7□□□□□ -0.7
NPLOC4-204ENST00000570324 RRP1P56182 461 aaKnown RBP10.7□□□□□ -0.7
NPLOC4-204ENST00000570324 TRIM32Q13049 653 aa10.7□□□□□ -0.7
NPLOC4-204ENST00000570324 MAP2K5Q13163 448 aa10.7□□□□□ -0.7
NPLOC4-204ENST00000570324 PLS1Q14651 629 aa10.7□□□□□ -0.7
NPLOC4-204ENST00000570324 MFSD14CQ5VZR4 134 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 98.3 ms