RNA–Protein interactions for RNA: ENST00000568507.5

CCNDBP1-213, Transcript of cyclin D1 binding protein 1, humanhuman

TSL 2

Gene CCNDBP1, Length 1,385 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNDBP1-213ENST00000568507 GJD2Q9UKL4 321 aa18.04■□□□□ 0.48
CCNDBP1-213ENST00000568507 LOC285556D6RIA3 1793 aa18.04■□□□□ 0.48
CCNDBP1-213ENST00000568507 FOCADQ5VW36 1801 aa18.04■□□□□ 0.48
CCNDBP1-213ENST00000568507 SEPT2Q15019 361 aa18.04■□□□□ 0.48
CCNDBP1-213ENST00000568507 UBE3CQ15386 1083 aa18.04■□□□□ 0.48
CCNDBP1-213ENST00000568507 SLFNL1Q499Z3 407 aa18.04■□□□□ 0.48
CCNDBP1-213ENST00000568507 ACER1Q8TDN7 264 aa18.04■□□□□ 0.48
CCNDBP1-213ENST00000568507 DPF3Q92784 378 aa18.04■□□□□ 0.48
CCNDBP1-213ENST00000568507 GPATCH3Q96I76 525 aa18.04■□□□□ 0.48
CCNDBP1-213ENST00000568507 DCTPP1Q9H773 170 aa18.04■□□□□ 0.48
CCNDBP1-213ENST00000568507 TXNRD2Q9NNW7 524 aa18.04■□□□□ 0.48
CCNDBP1-213ENST00000568507 ECHDC1Q9NTX5 307 aa18.04■□□□□ 0.48
CCNDBP1-213ENST00000568507 SWAP70Q9UH65 585 aa18.04■□□□□ 0.48
CCNDBP1-213ENST00000568507 CDK5RAP2Q96SN8 1893 aa18.03■□□□□ 0.48
CCNDBP1-213ENST00000568507 PRKAB2O43741 272 aa18.03■□□□□ 0.48
CCNDBP1-213ENST00000568507 PEX10O60683 326 aa18.03■□□□□ 0.48
CCNDBP1-213ENST00000568507 HMGCRP04035 888 aa18.03■□□□□ 0.48
CCNDBP1-213ENST00000568507 CYP2D6P10635 497 aa18.03■□□□□ 0.48
CCNDBP1-213ENST00000568507 CAPN2P17655 700 aa18.03■□□□□ 0.48
CCNDBP1-213ENST00000568507 MAPK4P31152 587 aa18.03■□□□□ 0.48
CCNDBP1-213ENST00000568507 ERVK-9P63128 1117 aa18.03■□□□□ 0.48
CCNDBP1-213ENST00000568507 ERVK-24P63145 666 aa18.03■□□□□ 0.48
CCNDBP1-213ENST00000568507 DEFB118Q96PH6 123 aa18.03■□□□□ 0.48
CCNDBP1-213ENST00000568507 NUDT12Q9BQG2 462 aa18.03■□□□□ 0.48
CCNDBP1-213ENST00000568507 MYH1P12882 1939 aa18.02■□□□□ 0.48
CCNDBP1-213ENST00000568507 CYP2B6P20813 491 aa18.02■□□□□ 0.47
CCNDBP1-213ENST00000568507 Q3C1V9 767 aa18.02■□□□□ 0.47
CCNDBP1-213ENST00000568507 CATSPERGQ6ZRH7 1159 aa18.02■□□□□ 0.47
CCNDBP1-213ENST00000568507 HTATIP2Q9BUP3 242 aa18.02■□□□□ 0.47
CCNDBP1-213ENST00000568507 SLC4A4Q9Y6R1 1079 aa18.02■□□□□ 0.47
CCNDBP1-213ENST00000568507 MGAMO43451 1857 aa18.01■□□□□ 0.47
CCNDBP1-213ENST00000568507 VCAM1P19320 739 aa18.01■□□□□ 0.47
CCNDBP1-213ENST00000568507 GUCY1A2P33402 732 aa18.01■□□□□ 0.47
CCNDBP1-213ENST00000568507 CCNA1P78396 465 aa18.01■□□□□ 0.47
CCNDBP1-213ENST00000568507 EVX2Q03828 476 aa18.01■□□□□ 0.47
CCNDBP1-213ENST00000568507 SOCS4Q8WXH5 440 aa18.01■□□□□ 0.47
CCNDBP1-213ENST00000568507 DYNLL2Q96FJ2 89 aa18.01■□□□□ 0.47
CCNDBP1-213ENST00000568507 RABGAP1Q9Y3P9 1069 aa18.01■□□□□ 0.47
CCNDBP1-213ENST00000568507 FARP2O94887 1054 aaPredicted RBP18■□□□□ 0.47
CCNDBP1-213ENST00000568507 CHGBP05060 677 aa18■□□□□ 0.47
CCNDBP1-213ENST00000568507 TMEM179Q6ZVK1 233 aa18■□□□□ 0.47
CCNDBP1-213ENST00000568507 PLEKHH3Q7Z736 793 aa18■□□□□ 0.47
CCNDBP1-213ENST00000568507 SLC44A5Q8NCS7 719 aa18■□□□□ 0.47
CCNDBP1-213ENST00000568507 XRN2Q9H0D6 950 aaKnown RBP eCLIP18■□□□□ 0.47
CCNDBP1-213ENST00000568507 RPAP3Q9H6T3 665 aaPredicted RBP18■□□□□ 0.47
CCNDBP1-213ENST00000568507 HMX1Q9NP08 348 aaPredicted RBP18■□□□□ 0.47
CCNDBP1-213ENST00000568507 PAK6Q9NQU5 681 aaPredicted RBP18■□□□□ 0.47
CCNDBP1-213ENST00000568507 USP17L12C9JPN9 530 aa17.99■□□□□ 0.47
CCNDBP1-213ENST00000568507 USP17L21D6R901 530 aa17.99■□□□□ 0.47
CCNDBP1-213ENST00000568507 GLRX3O76003 335 aaKnown RBP17.99■□□□□ 0.47
CCNDBP1-213ENST00000568507 GPR142Q7Z601 462 aa17.99■□□□□ 0.47
CCNDBP1-213ENST00000568507 TRMT44Q8IYL2 757 aaKnown RBP17.99■□□□□ 0.47
CCNDBP1-213ENST00000568507 CCDC17Q96LX7 622 aa17.99■□□□□ 0.47
CCNDBP1-213ENST00000568507 PUS7LQ9H0K6 701 aaKnown RBP17.99■□□□□ 0.47
CCNDBP1-213ENST00000568507 PORCNQ9H237 461 aa17.99■□□□□ 0.47
CCNDBP1-213ENST00000568507 RPTORQ8N122 1335 aa17.99■□□□□ 0.47
CCNDBP1-213ENST00000568507 H0YGN5 161 aa17.98■□□□□ 0.47
CCNDBP1-213ENST00000568507 XRCC5P13010 732 aaKnown RBP17.98■□□□□ 0.47
CCNDBP1-213ENST00000568507 RGS2P41220 211 aa17.98■□□□□ 0.47
CCNDBP1-213ENST00000568507 CDK8P49336 464 aa17.98■□□□□ 0.47
CCNDBP1-213ENST00000568507 HABP4Q5JVS0 413 aaKnown RBP17.98■□□□□ 0.47
CCNDBP1-213ENST00000568507 C12orf60Q5U649 245 aa17.98■□□□□ 0.47
CCNDBP1-213ENST00000568507 WDR78Q5VTH9 848 aa17.98■□□□□ 0.47
CCNDBP1-213ENST00000568507 UBE2Q1Q7Z7E8 422 aa17.98■□□□□ 0.47
CCNDBP1-213ENST00000568507 ARHGEF10LQ9HCE6 1279 aa17.98■□□□□ 0.47
CCNDBP1-213ENST00000568507 CYP2D7A0A087X1C5 515 aa17.97■□□□□ 0.47
CCNDBP1-213ENST00000568507 A0A1W2PRG0 241 aa17.97■□□□□ 0.47
CCNDBP1-213ENST00000568507 TRIM32Q13049 653 aa17.97■□□□□ 0.47
CCNDBP1-213ENST00000568507 KBTBD3Q8NAB2 608 aa17.97■□□□□ 0.47
CCNDBP1-213ENST00000568507 TANGO6Q9C0B7 1094 aa17.97■□□□□ 0.47
CCNDBP1-213ENST00000568507 SH2D4AQ9H788 454 aa17.97■□□□□ 0.47
CCNDBP1-213ENST00000568507 HOXC10Q9NYD6 342 aa17.97■□□□□ 0.47
CCNDBP1-213ENST00000568507 CNMDO75829 334 aa17.96■□□□□ 0.47
CCNDBP1-213ENST00000568507 AKR1B1P15121 316 aa17.96■□□□□ 0.47
CCNDBP1-213ENST00000568507 ZKSCAN1P17029 563 aaPredicted RBP17.96■□□□□ 0.47
CCNDBP1-213ENST00000568507 ICA1Q05084 483 aa17.96■□□□□ 0.47
CCNDBP1-213ENST00000568507 COG2Q14746 738 aa17.96■□□□□ 0.47
CCNDBP1-213ENST00000568507 LRRFIP1Q32MZ4 808 aaKnown RBP17.96■□□□□ 0.47
CCNDBP1-213ENST00000568507 TSHZ3Q63HK5 1081 aa17.96■□□□□ 0.47
CCNDBP1-213ENST00000568507 POTEEQ6S8J3 1075 aa17.96■□□□□ 0.47
CCNDBP1-213ENST00000568507 LBX2Q6XYB7 198 aa17.96■□□□□ 0.47
CCNDBP1-213ENST00000568507 TRIB2Q92519 343 aa17.96■□□□□ 0.47
CCNDBP1-213ENST00000568507 CRISPLD2Q9H0B8 497 aa17.96■□□□□ 0.47
CCNDBP1-213ENST00000568507 PCDHB15Q9Y5E8 787 aa17.96■□□□□ 0.47
CCNDBP1-213ENST00000568507 NR2E3Q9Y5X4 410 aa17.96■□□□□ 0.47
CCNDBP1-213ENST00000568507 RNF113AO15541 343 aaKnown RBP17.95■□□□□ 0.46
CCNDBP1-213ENST00000568507 ZFYP08048 801 aaPredicted RBP17.95■□□□□ 0.46
CCNDBP1-213ENST00000568507 RRP1P56182 461 aaKnown RBP17.95■□□□□ 0.46
CCNDBP1-213ENST00000568507 MORN1Q5T089 497 aa17.95■□□□□ 0.46
CCNDBP1-213ENST00000568507 CTR9Q6PD62 1173 aa17.95■□□□□ 0.46
CCNDBP1-213ENST00000568507 C16orf86Q6ZW13 317 aa17.95■□□□□ 0.46
CCNDBP1-213ENST00000568507 USP6NLQ92738 828 aa17.95■□□□□ 0.46
CCNDBP1-213ENST00000568507 STRBPQ96SI9 672 aaKnown RBP17.95■□□□□ 0.46
CCNDBP1-213ENST00000568507 ARPP21Q9UBL0 812 aaPredicted RBP17.95■□□□□ 0.46
CCNDBP1-213ENST00000568507 ZBTB47Q9UFB7 747 aaPredicted RBP17.95■□□□□ 0.46
CCNDBP1-213ENST00000568507 IVNS1ABPQ9Y6Y0 642 aa17.95■□□□□ 0.46
CCNDBP1-213ENST00000568507 NAV1Q8NEY1 1877 aa17.95■□□□□ 0.46
CCNDBP1-213ENST00000568507 SPDYE16A6NNV3 312 aaPredicted RBP17.94■□□□□ 0.46
CCNDBP1-213ENST00000568507 ERC2O15083 957 aa17.94■□□□□ 0.46
CCNDBP1-213ENST00000568507 PRKAR2AP13861 404 aaKnown RBP17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms