RNA–Protein interactions for RNA: ENST00000568129.1

HDGFL3-205, Transcript of HDGF like 3, humanhuman

TSL 2

Gene HDGFL3, Length 426 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-205ENST00000568129 POTEEQ6S8J3 1075 aa9.82□□□□□ -0.84
HDGFL3-205ENST00000568129 LBX2Q6XYB7 198 aa9.82□□□□□ -0.84
HDGFL3-205ENST00000568129 TMEM179Q6ZVK1 233 aa9.82□□□□□ -0.84
HDGFL3-205ENST00000568129 IFNL3Q8IZI9 196 aa9.82□□□□□ -0.84
HDGFL3-205ENST00000568129 DYNLL2Q96FJ2 89 aa9.82□□□□□ -0.84
HDGFL3-205ENST00000568129 SEC62Q99442 399 aaKnown RBP9.82□□□□□ -0.84
HDGFL3-205ENST00000568129 ASCC2Q9H1I8 757 aaPredicted RBP9.82□□□□□ -0.84
HDGFL3-205ENST00000568129 CABP5Q9NP86 173 aa9.82□□□□□ -0.84
HDGFL3-205ENST00000568129 HELLSQ9NRZ9 838 aa9.82□□□□□ -0.84
HDGFL3-205ENST00000568129 MORF4L1Q9UBU8 362 aa9.82□□□□□ -0.84
HDGFL3-205ENST00000568129 CPA4Q9UI42 421 aa9.82□□□□□ -0.84
HDGFL3-205ENST00000568129 CYP2D7A0A087X1C5 515 aa9.81□□□□□ -0.84
HDGFL3-205ENST00000568129 A0A1W2PRG0 241 aa9.81□□□□□ -0.84
HDGFL3-205ENST00000568129 FGRP09769 529 aa9.81□□□□□ -0.84
HDGFL3-205ENST00000568129 SEPT2Q15019 361 aa9.81□□□□□ -0.84
HDGFL3-205ENST00000568129 FAM110CQ1W6H9 321 aa9.81□□□□□ -0.84
HDGFL3-205ENST00000568129 SLC4A8Q2Y0W8 1093 aa9.81□□□□□ -0.84
HDGFL3-205ENST00000568129 SLC44A5Q8NCS7 719 aa9.81□□□□□ -0.84
HDGFL3-205ENST00000568129 ACER1Q8TDN7 264 aa9.81□□□□□ -0.84
HDGFL3-205ENST00000568129 GTF3C2Q8WUA4 911 aaPredicted RBP9.81□□□□□ -0.84
HDGFL3-205ENST00000568129 DDRGK1Q96HY6 314 aa9.81□□□□□ -0.84
HDGFL3-205ENST00000568129 TRIM47Q96LD4 638 aa9.81□□□□□ -0.84
HDGFL3-205ENST00000568129 FSD1Q9BTV5 496 aa9.81□□□□□ -0.84
HDGFL3-205ENST00000568129 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.81□□□□□ -0.84
HDGFL3-205ENST00000568129 ARHGAP39Q9C0H5 1083 aa9.81□□□□□ -0.84
HDGFL3-205ENST00000568129 SRRDQ9UH36 339 aa9.81□□□□□ -0.84
HDGFL3-205ENST00000568129 COL11A1P12107 1806 aaPredicted RBP9.81□□□□□ -0.84
HDGFL3-205ENST00000568129 A0A0G2JMZ2 1700 aa9.8□□□□□ -0.84
HDGFL3-205ENST00000568129 IGKV6D-41A0A0C4DH26 115 aa9.8□□□□□ -0.84
HDGFL3-205ENST00000568129 AKR1B1P15121 316 aa9.8□□□□□ -0.84
HDGFL3-205ENST00000568129 OSBPP22059 807 aa9.8□□□□□ -0.84
HDGFL3-205ENST00000568129 PSMC4P43686 418 aa9.8□□□□□ -0.84
HDGFL3-205ENST00000568129 KIF22Q14807 665 aa9.8□□□□□ -0.84
HDGFL3-205ENST00000568129 B4GALNT3Q6L9W6 998 aa9.8□□□□□ -0.84
HDGFL3-205ENST00000568129 CATSPERGQ6ZRH7 1159 aa9.8□□□□□ -0.84
HDGFL3-205ENST00000568129 AMOTL1Q8IY63 956 aa9.8□□□□□ -0.84
HDGFL3-205ENST00000568129 P2RX7Q99572 595 aaKnown RBP9.8□□□□□ -0.84
HDGFL3-205ENST00000568129 TMOD4Q9NZQ9 345 aa9.8□□□□□ -0.84
HDGFL3-205ENST00000568129 RBPJLQ9UBG7 517 aa9.8□□□□□ -0.84
HDGFL3-205ENST00000568129 ANAPC4Q9UJX5 808 aa9.8□□□□□ -0.84
HDGFL3-205ENST00000568129 TMX2Q9Y320 296 aa9.8□□□□□ -0.84
HDGFL3-205ENST00000568129 ZMYM6O95789 1325 aa9.8□□□□□ -0.84
HDGFL3-205ENST00000568129 PLIN4Q96Q06 1357 aa9.79□□□□□ -0.84
HDGFL3-205ENST00000568129 CCDC85CA6NKD9 419 aa9.79□□□□□ -0.84
HDGFL3-205ENST00000568129 USP17L15C9J2P7 530 aa9.79□□□□□ -0.84
HDGFL3-205ENST00000568129 USP17L13C9JLJ4 530 aa9.79□□□□□ -0.84
HDGFL3-205ENST00000568129 USP17L11C9JVI0 530 aa9.79□□□□□ -0.84
HDGFL3-205ENST00000568129 USP17L18D6R9N7 530 aa9.79□□□□□ -0.84
HDGFL3-205ENST00000568129 USP17L22D6RA61 530 aa9.79□□□□□ -0.84
HDGFL3-205ENST00000568129 USP17L17D6RBQ6 530 aa9.79□□□□□ -0.84
HDGFL3-205ENST00000568129 USP17L19D6RCP7 530 aa9.79□□□□□ -0.84
HDGFL3-205ENST00000568129 USP17L20D6RJB6 530 aa9.79□□□□□ -0.84
HDGFL3-205ENST00000568129 RASA1P20936 1047 aa9.79□□□□□ -0.84
HDGFL3-205ENST00000568129 PDE4AP27815 886 aa9.79□□□□□ -0.84
HDGFL3-205ENST00000568129 HOXD10P28358 340 aa9.79□□□□□ -0.84
HDGFL3-205ENST00000568129 HERVK_113P62684 666 aa9.79□□□□□ -0.84
HDGFL3-205ENST00000568129 USP17L24Q0WX57 530 aa9.79□□□□□ -0.84
HDGFL3-205ENST00000568129 IRF5Q13568 498 aa9.79□□□□□ -0.84
HDGFL3-205ENST00000568129 RAB3GAP1Q15042 981 aa9.79□□□□□ -0.84
HDGFL3-205ENST00000568129 MCMDC2Q4G0Z9 681 aa9.79□□□□□ -0.84
HDGFL3-205ENST00000568129 LPAR1Q92633 364 aa9.79□□□□□ -0.84
HDGFL3-205ENST00000568129 MKL1Q969V6 931 aa9.79□□□□□ -0.84
HDGFL3-205ENST00000568129 NACAP1Q9BZK3 213 aa9.79□□□□□ -0.84
HDGFL3-205ENST00000568129 KANSL2Q9H9L4 492 aa9.79□□□□□ -0.84
HDGFL3-205ENST00000568129 GJD2Q9UKL4 321 aa9.79□□□□□ -0.84
HDGFL3-205ENST00000568129 SYNPO2Q9UMS6 1093 aa9.79□□□□□ -0.84
HDGFL3-205ENST00000568129 LAMA4Q16363 1823 aa9.79□□□□□ -0.84
HDGFL3-205ENST00000568129 BRCA2P51587 3418 aa9.78□□□□□ -0.84
HDGFL3-205ENST00000568129 VCAM1P19320 739 aa9.78□□□□□ -0.84
HDGFL3-205ENST00000568129 SDSP20132 328 aa9.78□□□□□ -0.84
HDGFL3-205ENST00000568129 NOVP48745 357 aa9.78□□□□□ -0.84
HDGFL3-205ENST00000568129 FCGRTP55899 365 aa9.78□□□□□ -0.84
HDGFL3-205ENST00000568129 KIAA1755Q5JYT7 1200 aa9.78□□□□□ -0.84
HDGFL3-205ENST00000568129 ANKRD13CQ8N6S4 541 aa9.78□□□□□ -0.84
HDGFL3-205ENST00000568129 PXYLP1Q8TE99 480 aa9.78□□□□□ -0.84
HDGFL3-205ENST00000568129 SMCR8Q8TEV9 937 aaPredicted RBP9.78□□□□□ -0.84
HDGFL3-205ENST00000568129 ZNF333Q96JL9 665 aa9.78□□□□□ -0.84
HDGFL3-205ENST00000568129 TXNRD2Q9NNW7 524 aa9.78□□□□□ -0.84
HDGFL3-205ENST00000568129 NYAP2Q9P242 653 aa9.78□□□□□ -0.84
HDGFL3-205ENST00000568129 ADAMTS5Q9UNA0 930 aa9.78□□□□□ -0.84
HDGFL3-205ENST00000568129 PTCH2Q9Y6C5 1203 aa9.78□□□□□ -0.84
HDGFL3-205ENST00000568129 TNRC18O15417 2968 aaPredicted RBP9.78□□□□□ -0.84
HDGFL3-205ENST00000568129 A0A0D9SFI3 127 aa9.77□□□□□ -0.85
HDGFL3-205ENST00000568129 CAPN15O75808 1086 aa9.77□□□□□ -0.85
HDGFL3-205ENST00000568129 CNMDO75829 334 aa9.77□□□□□ -0.85
HDGFL3-205ENST00000568129 FGAP02671 866 aa9.77□□□□□ -0.85
HDGFL3-205ENST00000568129 HSPD1P10809 573 aaKnown RBP9.77□□□□□ -0.85
HDGFL3-205ENST00000568129 IRX3P78415 501 aaPredicted RBP9.77□□□□□ -0.85
HDGFL3-205ENST00000568129 Q3C1V9 767 aa9.77□□□□□ -0.85
HDGFL3-205ENST00000568129 NBPF11Q86T75 865 aa9.77□□□□□ -0.85
HDGFL3-205ENST00000568129 NEDD1Q8NHV4 660 aa9.77□□□□□ -0.85
HDGFL3-205ENST00000568129 USP6NLQ92738 828 aa9.77□□□□□ -0.85
HDGFL3-205ENST00000568129 FAM227BQ96M60 508 aa9.77□□□□□ -0.85
HDGFL3-205ENST00000568129 VCPKMTQ9H867 229 aa9.77□□□□□ -0.85
HDGFL3-205ENST00000568129 ZNF287Q9HBT7 754 aa9.77□□□□□ -0.85
HDGFL3-205ENST00000568129 ARHGEF10LQ9HCE6 1279 aa9.77□□□□□ -0.85
HDGFL3-205ENST00000568129 DDX52Q9Y2R4 599 aaKnown RBP eCLIP9.77□□□□□ -0.85
HDGFL3-205ENST00000568129 RABGAP1Q9Y3P9 1069 aa9.77□□□□□ -0.85
HDGFL3-205ENST00000568129 MYPNQ86TC9 1320 aa9.77□□□□□ -0.85
HDGFL3-205ENST00000568129 SPDYE16A6NNV3 312 aaPredicted RBP9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms