RNA–Protein interactions for RNA: ENST00000567648.1

VAC14-209, Transcript of Vac14, PIKFYVE complex component, humanhuman

TSL 3

Gene VAC14, Length 702 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAC14-209ENST00000567648 TTF1Q15361 905 aaPredicted RBP20.66■□□□□ 0.9
VAC14-209ENST00000567648 ABCB5Q2M3G0 1257 aa20.66■□□□□ 0.9
VAC14-209ENST00000567648 CERKLQ49MI3 558 aaPredicted RBP20.66■□□□□ 0.9
VAC14-209ENST00000567648 PXYLP1Q8TE99 480 aa20.66■□□□□ 0.9
VAC14-209ENST00000567648 DIS3LQ8TF46 1054 aaKnown RBP20.66■□□□□ 0.9
VAC14-209ENST00000567648 DEFB118Q96PH6 123 aa20.66■□□□□ 0.9
VAC14-209ENST00000567648 PAGR1Q9BTK6 254 aa20.66■□□□□ 0.9
VAC14-209ENST00000567648 PAK6Q9NQU5 681 aaPredicted RBP20.66■□□□□ 0.9
VAC14-209ENST00000567648 MCM9Q9NXL9 1143 aa20.66■□□□□ 0.9
VAC14-209ENST00000567648 COL11A1P12107 1806 aaPredicted RBP20.66■□□□□ 0.9
VAC14-209ENST00000567648 GREB1LQ9C091 1923 aaPredicted RBP20.66■□□□□ 0.9
VAC14-209ENST00000567648 CEP290O15078 2479 aa20.65■□□□□ 0.9
VAC14-209ENST00000567648 C19orf81C9J6K1 198 aa20.65■□□□□ 0.9
VAC14-209ENST00000567648 VCAM1P19320 739 aa20.65■□□□□ 0.9
VAC14-209ENST00000567648 PABPC4Q13310 644 aaKnown RBP eCLIP20.65■□□□□ 0.9
VAC14-209ENST00000567648 PDE3AQ14432 1141 aa20.65■□□□□ 0.9
VAC14-209ENST00000567648 HABP4Q5JVS0 413 aaKnown RBP20.65■□□□□ 0.9
VAC14-209ENST00000567648 USP17L2Q6R6M4 530 aa20.65■□□□□ 0.9
VAC14-209ENST00000567648 COA7Q96BR5 231 aa20.65■□□□□ 0.9
VAC14-209ENST00000567648 C12orf42Q96LP6 360 aa20.65■□□□□ 0.9
VAC14-209ENST00000567648 SGPL1O95470 568 aa20.64■□□□□ 0.89
VAC14-209ENST00000567648 POLR3DP05423 398 aaPredicted RBP20.64■□□□□ 0.89
VAC14-209ENST00000567648 CYP2B6P20813 491 aa20.64■□□□□ 0.89
VAC14-209ENST00000567648 TTC6Q86TZ1 520 aa20.64■□□□□ 0.89
VAC14-209ENST00000567648 CRNKL1Q9BZJ0 848 aaKnown RBP20.64■□□□□ 0.89
VAC14-209ENST00000567648 COLQQ9Y215 455 aaPredicted RBP20.64■□□□□ 0.89
VAC14-209ENST00000567648 ERVK-9P63128 1117 aa20.63■□□□□ 0.89
VAC14-209ENST00000567648 ERVK-24P63145 666 aa20.63■□□□□ 0.89
VAC14-209ENST00000567648 CCL14Q16627 93 aa20.63■□□□□ 0.89
VAC14-209ENST00000567648 SIAH1Q8IUQ4 282 aa20.63■□□□□ 0.89
VAC14-209ENST00000567648 FEZ1Q99689 392 aa20.63■□□□□ 0.89
VAC14-209ENST00000567648 LRRCC1Q9C099 1032 aa20.63■□□□□ 0.89
VAC14-209ENST00000567648 XRN2Q9H0D6 950 aaKnown RBP eCLIP20.63■□□□□ 0.893e-6■■■■□ 19.8
VAC14-209ENST00000567648 PUS7LQ9H0K6 701 aaKnown RBP20.63■□□□□ 0.89
VAC14-209ENST00000567648 GINM1Q9NU53 330 aa20.63■□□□□ 0.89
VAC14-209ENST00000567648 BTBD7Q9P203 1132 aa20.63■□□□□ 0.89
VAC14-209ENST00000567648 FARP2O94887 1054 aaPredicted RBP20.62■□□□□ 0.89
VAC14-209ENST00000567648 AKR1B1P15121 316 aa20.62■□□□□ 0.89
VAC14-209ENST00000567648 MNX1P50219 401 aaPredicted RBP20.62■□□□□ 0.89
VAC14-209ENST00000567648 OTUD7AQ8TE49 926 aaPredicted RBP20.62■□□□□ 0.89
VAC14-209ENST00000567648 KIAA1683Q9H0B3 1180 aa20.62■□□□□ 0.89
VAC14-209ENST00000567648 CRISPLD2Q9H0B8 497 aa20.62■□□□□ 0.89
VAC14-209ENST00000567648 PCDHB15Q9Y5E8 787 aa20.62■□□□□ 0.89
VAC14-209ENST00000567648 GPR142Q7Z601 462 aa20.61■□□□□ 0.89
VAC14-209ENST00000567648 CERS3Q8IU89 383 aa20.61■□□□□ 0.89
VAC14-209ENST00000567648 GPRC5AQ8NFJ5 357 aa20.61■□□□□ 0.89
VAC14-209ENST00000567648 USP6NLQ92738 828 aa20.61■□□□□ 0.89
VAC14-209ENST00000567648 RPAP3Q9H6T3 665 aaPredicted RBP20.61■□□□□ 0.89
VAC14-209ENST00000567648 LAMA3Q16787 3333 aa20.6■□□□□ 0.89
VAC14-209ENST00000567648 SPDYE16A6NNV3 312 aaPredicted RBP20.6■□□□□ 0.89
VAC14-209ENST00000567648 HMGCRP04035 888 aa20.6■□□□□ 0.89
VAC14-209ENST00000567648 CATSPERGQ6ZRH7 1159 aa20.6■□□□□ 0.89
VAC14-209ENST00000567648 MPHOSPH10O00566 681 aaKnown RBP20.59■□□□□ 0.89
VAC14-209ENST00000567648 MORN1Q5T089 497 aa20.59■□□□□ 0.89
VAC14-209ENST00000567648 NKX2-3Q8TAU0 364 aa20.59■□□□□ 0.89
VAC14-209ENST00000567648 DCTPP1Q9H773 170 aa20.59■□□□□ 0.89
VAC14-209ENST00000567648 FLRT1Q9NZU1 646 aa20.59■□□□□ 0.89
VAC14-209ENST00000567648 USP17L15C9J2P7 530 aa20.58■□□□□ 0.89
VAC14-209ENST00000567648 USP17L13C9JLJ4 530 aa20.58■□□□□ 0.89
VAC14-209ENST00000567648 USP17L11C9JVI0 530 aa20.58■□□□□ 0.89
VAC14-209ENST00000567648 USP17L18D6R9N7 530 aa20.58■□□□□ 0.89
VAC14-209ENST00000567648 USP17L22D6RA61 530 aa20.58■□□□□ 0.89
VAC14-209ENST00000567648 USP17L17D6RBQ6 530 aa20.58■□□□□ 0.89
VAC14-209ENST00000567648 USP17L19D6RCP7 530 aa20.58■□□□□ 0.89
VAC14-209ENST00000567648 USP17L20D6RJB6 530 aa20.58■□□□□ 0.89
VAC14-209ENST00000567648 FXR1P51114 621 aaKnown RBP eCLIP20.58■□□□□ 0.89
VAC14-209ENST00000567648 USP17L24Q0WX57 530 aa20.58■□□□□ 0.89
VAC14-209ENST00000567648 MAP3K21Q5TCX8 1036 aa20.58■□□□□ 0.89
VAC14-209ENST00000567648 TMED8Q6PL24 325 aaPredicted RBP20.58■□□□□ 0.89
VAC14-209ENST00000567648 DPF3Q92784 378 aa20.58■□□□□ 0.89
VAC14-209ENST00000567648 TRIOBPQ9H2D6 2365 aa20.58■□□□□ 0.88
VAC14-209ENST00000567648 USP17L12C9JPN9 530 aa20.57■□□□□ 0.88
VAC14-209ENST00000567648 USP17L21D6R901 530 aa20.57■□□□□ 0.88
VAC14-209ENST00000567648 TFRCP02786 760 aaKnown RBP20.57■□□□□ 0.88
VAC14-209ENST00000567648 PRKAR2AP13861 404 aaKnown RBP20.57■□□□□ 0.88
VAC14-209ENST00000567648 UBE3CQ15386 1083 aa20.57■□□□□ 0.88
VAC14-209ENST00000567648 C12orf60Q5U649 245 aa20.57■□□□□ 0.88
VAC14-209ENST00000567648 CHRDL2Q6WN34 429 aa20.57■□□□□ 0.88
VAC14-209ENST00000567648 PAWRQ96IZ0 340 aaKnown RBP20.57■□□□□ 0.88
VAC14-209ENST00000567648 ZNF236Q9UL36 1845 aa20.57■□□□□ 0.88
VAC14-209ENST00000567648 DNAH12Q6ZR08 3092 aa20.57■□□□□ 0.88
VAC14-209ENST00000567648 CCND3P30281 292 aaPredicted RBP20.56■□□□□ 0.88
VAC14-209ENST00000567648 CTR9Q6PD62 1173 aa20.56■□□□□ 0.88
VAC14-209ENST00000567648 SPICE1Q8N0Z3 855 aa20.56■□□□□ 0.88
VAC14-209ENST00000567648 STK11IPQ8N1F8 1099 aa20.56■□□□□ 0.88
VAC14-209ENST00000567648 OSBP2Q969R2 916 aa20.56■□□□□ 0.88
VAC14-209ENST00000567648 GNL3Q9BVP2 549 aaKnown RBP eCLIP20.56■□□□□ 0.88
VAC14-209ENST00000567648 CABP5Q9NP86 173 aa20.56■□□□□ 0.88
VAC14-209ENST00000567648 ECHDC1Q9NTX5 307 aa20.56■□□□□ 0.88
VAC14-209ENST00000567648 SLC4A4Q9Y6R1 1079 aa20.56■□□□□ 0.88
VAC14-209ENST00000567648 ZNFX1Q9P2E3 1918 aaKnown RBP20.56■□□□□ 0.88
VAC14-209ENST00000567648 MYH4Q9Y623 1939 aa20.56■□□□□ 0.88
VAC14-209ENST00000567648 M0R2C6 588 aa20.55■□□□□ 0.88
VAC14-209ENST00000567648 CDK8P49336 464 aa20.55■□□□□ 0.88
VAC14-209ENST00000567648 CACNB2Q08289 660 aaPredicted RBP20.55■□□□□ 0.88
VAC14-209ENST00000567648 PLEKHH3Q7Z736 793 aa20.55■□□□□ 0.88
VAC14-209ENST00000567648 NPLOC4Q8TAT6 608 aa20.55■□□□□ 0.88
VAC14-209ENST00000567648 NUDT12Q9BQG2 462 aa20.55■□□□□ 0.88
VAC14-209ENST00000567648 EPB41L4AQ9HCS5 686 aaPredicted RBP20.55■□□□□ 0.88
VAC14-209ENST00000567648 RBM27Q9P2N5 1060 aaKnown RBP20.55■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms