RNA–Protein interactions for RNA: ENST00000567445.1

CDH13-210, Transcript of cadherin 13, humanhuman

TSL 1 (best) BASIC

Gene CDH13, Length 1,456 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-210ENST00000567445 MGAMO43451 1857 aa11.24□□□□□ -0.61
CDH13-210ENST00000567445 CAP2P40123 477 aa11.24□□□□□ -0.61
CDH13-210ENST00000567445 PPP4CP60510 307 aa11.24□□□□□ -0.61
CDH13-210ENST00000567445 SPP2Q13103 211 aa11.24□□□□□ -0.61
CDH13-210ENST00000567445 TREML2Q5T2D2 321 aa11.24□□□□□ -0.61
CDH13-210ENST00000567445 NKX2-3Q8TAU0 364 aa11.24□□□□□ -0.61
CDH13-210ENST00000567445 SLC4A5Q9BY07 1137 aa11.24□□□□□ -0.61
CDH13-210ENST00000567445 ADAM33Q9BZ11 813 aa11.24□□□□□ -0.61
CDH13-210ENST00000567445 BIN2Q9UBW5 565 aaPredicted RBP11.24□□□□□ -0.61
CDH13-210ENST00000567445 PNMA3Q9UL41 463 aa11.24□□□□□ -0.61
CDH13-210ENST00000567445 VPS9D1Q9Y2B5 631 aa11.24□□□□□ -0.61
CDH13-210ENST00000567445 CEP290O15078 2479 aa11.23□□□□□ -0.61
CDH13-210ENST00000567445 MAST2Q6P0Q8 1798 aa11.23□□□□□ -0.61
CDH13-210ENST00000567445 USP17L5A8MUK1 530 aa11.23□□□□□ -0.61
CDH13-210ENST00000567445 TNPO2O14787 897 aaKnown RBP11.23□□□□□ -0.61
CDH13-210ENST00000567445 CCL5P13501 91 aa11.23□□□□□ -0.61
CDH13-210ENST00000567445 ZAP70P43403 619 aa11.23□□□□□ -0.61
CDH13-210ENST00000567445 UBXN2AP68543 259 aa11.23□□□□□ -0.61
CDH13-210ENST00000567445 RRP1BQ14684 758 aaKnown RBP11.23□□□□□ -0.61
CDH13-210ENST00000567445 HABP4Q5JVS0 413 aaKnown RBP11.23□□□□□ -0.61
CDH13-210ENST00000567445 ADGRA1Q86SQ6 560 aa11.23□□□□□ -0.61
CDH13-210ENST00000567445 ANKRD13CQ8N6S4 541 aa11.23□□□□□ -0.61
CDH13-210ENST00000567445 RNF208Q9H0X6 261 aa11.23□□□□□ -0.61
CDH13-210ENST00000567445 DBNLQ9UJU6 430 aaKnown RBP11.23□□□□□ -0.61
CDH13-210ENST00000567445 GABRQQ9UN88 632 aa11.23□□□□□ -0.61
CDH13-210ENST00000567445 FLT1P17948 1338 aa11.22□□□□□ -0.61
CDH13-210ENST00000567445 ATAD5Q96QE3 1844 aa11.22□□□□□ -0.61
CDH13-210ENST00000567445 DPYSL4O14531 572 aa11.22□□□□□ -0.61
CDH13-210ENST00000567445 GJB1P08034 283 aa11.22□□□□□ -0.61
CDH13-210ENST00000567445 GJA8P48165 433 aa11.22□□□□□ -0.61
CDH13-210ENST00000567445 FLT3LGP49771 235 aa11.22□□□□□ -0.61
CDH13-210ENST00000567445 HMGCS2P54868 508 aa11.22□□□□□ -0.61
CDH13-210ENST00000567445 PABPC4Q13310 644 aaKnown RBP eCLIP11.22□□□□□ -0.61
CDH13-210ENST00000567445 FAM110CQ1W6H9 321 aa11.22□□□□□ -0.61
CDH13-210ENST00000567445 MAPKAPK5Q8IW41 473 aa11.22□□□□□ -0.61
CDH13-210ENST00000567445 TGFBRAP1Q8WUH2 860 aa11.22□□□□□ -0.61
CDH13-210ENST00000567445 SHISA4Q96DD7 197 aa11.22□□□□□ -0.61
CDH13-210ENST00000567445 AS3MTQ9HBK9 375 aa11.22□□□□□ -0.61
CDH13-210ENST00000567445 PIH1D3Q9NQM4 214 aaKnown RBP11.22□□□□□ -0.61
CDH13-210ENST00000567445 TLR7Q9NYK1 1049 aaKnown RBP11.22□□□□□ -0.61
CDH13-210ENST00000567445 PCDHGA10Q9Y5H3 936 aa11.22□□□□□ -0.61
CDH13-210ENST00000567445 LOC285556D6RIA3 1793 aa11.21□□□□□ -0.61
CDH13-210ENST00000567445 ADCY3O60266 1144 aa11.21□□□□□ -0.61
CDH13-210ENST00000567445 ASNSP08243 561 aa11.21□□□□□ -0.61
CDH13-210ENST00000567445 GCLCP48506 637 aaPredicted RBP11.21□□□□□ -0.61
CDH13-210ENST00000567445 IRF5Q13568 498 aa11.21□□□□□ -0.61
CDH13-210ENST00000567445 DIEXFQ68CQ4 756 aaKnown RBP11.21□□□□□ -0.61
CDH13-210ENST00000567445 CEP85Q6P2H3 762 aa11.21□□□□□ -0.61
CDH13-210ENST00000567445 METTL16Q86W50 562 aaKnown RBP11.21□□□□□ -0.61
CDH13-210ENST00000567445 FOXP4Q8IVH2 680 aaPredicted RBP11.21□□□□□ -0.61
CDH13-210ENST00000567445 PXYLP1Q8TE99 480 aa11.21□□□□□ -0.61
CDH13-210ENST00000567445 COA7Q96BR5 231 aa11.21□□□□□ -0.61
CDH13-210ENST00000567445 EAF2Q96CJ1 260 aaPredicted RBP11.21□□□□□ -0.61
CDH13-210ENST00000567445 WDR18Q9BV38 432 aa11.21□□□□□ -0.61
CDH13-210ENST00000567445 CCDC8Q9H0W5 538 aaPredicted RBP11.21□□□□□ -0.61
CDH13-210ENST00000567445 CDK5RAP2Q96SN8 1893 aa11.21□□□□□ -0.62
CDH13-210ENST00000567445 MYO5AQ9Y4I1 1855 aaKnown RBP11.21□□□□□ -0.62
CDH13-210ENST00000567445 SIPA1L1O43166 1804 aa11.21□□□□□ -0.62
CDH13-210ENST00000567445 DOCK3Q8IZD9 2030 aa11.21□□□□□ -0.62
CDH13-210ENST00000567445 ZBED9Q6R2W3 1325 aa11.2□□□□□ -0.62
CDH13-210ENST00000567445 ELNP15502 786 aa11.2□□□□□ -0.62
CDH13-210ENST00000567445 CYP7A1P22680 504 aa11.2□□□□□ -0.62
CDH13-210ENST00000567445 SH3D19Q5HYK7 790 aa11.2□□□□□ -0.62
CDH13-210ENST00000567445 ERC1Q8IUD2 1116 aa11.2□□□□□ -0.62
CDH13-210ENST00000567445 CRACR2BQ8N4Y2 399 aaPredicted RBP11.2□□□□□ -0.62
CDH13-210ENST00000567445 TRIM34Q9BYJ4 488 aa11.2□□□□□ -0.62
CDH13-210ENST00000567445 UNC93B1Q9H1C4 597 aa11.2□□□□□ -0.62
CDH13-210ENST00000567445 DNAJC18Q9H819 358 aa11.2□□□□□ -0.62
CDH13-210ENST00000567445 GINM1Q9NU53 330 aa11.2□□□□□ -0.62
CDH13-210ENST00000567445 PALD1Q9ULE6 856 aa11.2□□□□□ -0.62
CDH13-210ENST00000567445 FOCADQ5VW36 1801 aa11.2□□□□□ -0.62
CDH13-210ENST00000567445 IDH1O75874 414 aaKnown RBP11.19□□□□□ -0.62
CDH13-210ENST00000567445 INHAP05111 366 aa11.19□□□□□ -0.62
CDH13-210ENST00000567445 HLA-DOAP06340 250 aa11.19□□□□□ -0.62
CDH13-210ENST00000567445 BACE1P56817 501 aa11.19□□□□□ -0.62
CDH13-210ENST00000567445 MTMR2Q13614 643 aa11.19□□□□□ -0.62
CDH13-210ENST00000567445 TYW1BQ6NUM6 668 aa11.19□□□□□ -0.62
CDH13-210ENST00000567445 TMED8Q6PL24 325 aaPredicted RBP11.19□□□□□ -0.62
CDH13-210ENST00000567445 UBE2Q1Q7Z7E8 422 aa11.19□□□□□ -0.62
CDH13-210ENST00000567445 CERS3Q8IU89 383 aa11.19□□□□□ -0.62
CDH13-210ENST00000567445 PANK1Q8TE04 598 aa11.19□□□□□ -0.62
CDH13-210ENST00000567445 U2AF1L4Q8WU68 220 aaKnown RBP11.19□□□□□ -0.62
CDH13-210ENST00000567445 ASCC2Q9H1I8 757 aaPredicted RBP11.19□□□□□ -0.62
CDH13-210ENST00000567445 EXOC6BQ9Y2D4 811 aa11.19□□□□□ -0.62
CDH13-210ENST00000567445 C19orf81C9J6K1 198 aa11.19□□□□□ -0.62
CDH13-210ENST00000567445 H0YGN5 161 aa11.19□□□□□ -0.62
CDH13-210ENST00000567445 SGPL1O95470 568 aa11.19□□□□□ -0.62
CDH13-210ENST00000567445 DYNLL1P63167 89 aaKnown RBP11.19□□□□□ -0.62
CDH13-210ENST00000567445 JAG1P78504 1218 aa11.19□□□□□ -0.62
CDH13-210ENST00000567445 AACSQ86V21 672 aa11.19□□□□□ -0.62
CDH13-210ENST00000567445 MIGA1Q8NAN2 632 aa11.19□□□□□ -0.62
CDH13-210ENST00000567445 ZBED2Q9BTP6 218 aa11.19□□□□□ -0.62
CDH13-210ENST00000567445 TMOD4Q9NZQ9 345 aa11.19□□□□□ -0.62
CDH13-210ENST00000567445 HCSTQ9UBK5 93 aa11.19□□□□□ -0.62
CDH13-210ENST00000567445 SAP30BPQ9UHR5 308 aaKnown RBP11.19□□□□□ -0.62
CDH13-210ENST00000567445 NDUFB9Q9Y6M9 179 aa11.19□□□□□ -0.62
CDH13-210ENST00000567445 USP17L10C9JJH3 530 aa11.18□□□□□ -0.62
CDH13-210ENST00000567445 ZMYND10O75800 440 aa11.18□□□□□ -0.62
CDH13-210ENST00000567445 GDF11O95390 407 aa11.18□□□□□ -0.62
CDH13-210ENST00000567445 CAPN2P17655 700 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms