RNA–Protein interactions for RNA: ENST00000566882.5

CCNDBP1-210, Transcript of cyclin D1 binding protein 1, humanhuman

TSL 2

Gene CCNDBP1, Length 2,746 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNDBP1-210ENST00000566882 CNTNAP5Q8WYK1 1306 aa11.72□□□□□ -0.53
CCNDBP1-210ENST00000566882 UTRNP46939 3433 aa11.71□□□□□ -0.53
CCNDBP1-210ENST00000566882 NAV1Q8NEY1 1877 aa11.71□□□□□ -0.53
CCNDBP1-210ENST00000566882 SRGNP10124 158 aa11.71□□□□□ -0.53
CCNDBP1-210ENST00000566882 PDE4BQ07343 736 aa11.71□□□□□ -0.53
CCNDBP1-210ENST00000566882 DHX40Q8IX18 779 aaKnown RBP11.71□□□□□ -0.53
CCNDBP1-210ENST00000566882 CERS5Q8N5B7 392 aa11.71□□□□□ -0.53
CCNDBP1-210ENST00000566882 CNKSR2Q8WXI2 1034 aa11.71□□□□□ -0.53
CCNDBP1-210ENST00000566882 WASF1Q92558 559 aa11.71□□□□□ -0.53
CCNDBP1-210ENST00000566882 RNF26Q9BY78 433 aaPredicted RBP11.71□□□□□ -0.53
CCNDBP1-210ENST00000566882 KCNF1Q9H3M0 494 aa11.71□□□□□ -0.53
CCNDBP1-210ENST00000566882 ZNF219Q9P2Y4 722 aaPredicted RBP11.71□□□□□ -0.53
CCNDBP1-210ENST00000566882 ADAMTSL1Q8N6G6 1762 aa11.71□□□□□ -0.53
CCNDBP1-210ENST00000566882 RHBDL3P58872 404 aa11.71□□□□□ -0.54
CCNDBP1-210ENST00000566882 PPP4CP60510 307 aa11.71□□□□□ -0.54
CCNDBP1-210ENST00000566882 RBM6P78332 1123 aaKnown RBP11.71□□□□□ -0.54
CCNDBP1-210ENST00000566882 HPSEQ9Y251 543 aa11.71□□□□□ -0.54
CCNDBP1-210ENST00000566882 COL11A2P13942 1736 aaPredicted RBP11.71□□□□□ -0.54
CCNDBP1-210ENST00000566882 CTAGE5O15320 804 aa11.7□□□□□ -0.54
CCNDBP1-210ENST00000566882 PRPF3O43395 683 aaKnown RBP11.7□□□□□ -0.54
CCNDBP1-210ENST00000566882 PNOCQ13519 176 aa11.7□□□□□ -0.54
CCNDBP1-210ENST00000566882 SAFBQ15424 915 aaKnown RBP eCLIP11.7□□□□□ -0.54
CCNDBP1-210ENST00000566882 STX1AQ16623 288 aa11.7□□□□□ -0.54
CCNDBP1-210ENST00000566882 LONRF3Q496Y0 759 aa11.7□□□□□ -0.54
CCNDBP1-210ENST00000566882 TEX11Q8IYF3 940 aa11.7□□□□□ -0.54
CCNDBP1-210ENST00000566882 PHF20Q9BVI0 1012 aa11.7□□□□□ -0.54
CCNDBP1-210ENST00000566882 MKNK2Q9HBH9 465 aa11.7□□□□□ -0.54
CCNDBP1-210ENST00000566882 KIAA1468Q9P260 1216 aa11.7□□□□□ -0.54
CCNDBP1-210ENST00000566882 PPP6R2O75170 966 aa11.7□□□□□ -0.54
CCNDBP1-210ENST00000566882 BAG3O95817 575 aa11.7□□□□□ -0.54
CCNDBP1-210ENST00000566882 GOLGA8HP0CJ92 632 aa11.7□□□□□ -0.54
CCNDBP1-210ENST00000566882 RASA1P20936 1047 aa11.7□□□□□ -0.54
CCNDBP1-210ENST00000566882 CDK11BP21127 795 aaKnown RBP11.7□□□□□ -0.54
CCNDBP1-210ENST00000566882 SYKP43405 635 aa11.7□□□□□ -0.54
CCNDBP1-210ENST00000566882 RCAN1P53805 252 aa11.7□□□□□ -0.54
CCNDBP1-210ENST00000566882 AKAP17AQ02040 695 aaKnown RBP11.7□□□□□ -0.54
CCNDBP1-210ENST00000566882 AOPEPQ8N6M6 819 aa11.7□□□□□ -0.54
CCNDBP1-210ENST00000566882 GPKOWQ92917 476 aaPredicted RBP eCLIP11.7□□□□□ -0.545e-6■□□□□ 9.8
CCNDBP1-210ENST00000566882 FOXP1Q9H334 677 aaPredicted RBP11.7□□□□□ -0.54
CCNDBP1-210ENST00000566882 FBXO2Q9UK22 296 aaPredicted RBP11.7□□□□□ -0.54
CCNDBP1-210ENST00000566882 LRRC37AA6NMS7 1700 aa11.7□□□□□ -0.54
CCNDBP1-210ENST00000566882 DDX60LQ5H9U9 1706 aaKnown RBP11.7□□□□□ -0.54
CCNDBP1-210ENST00000566882 GPR75-ASB3A0A0A6YYF3 556 aa11.69□□□□□ -0.54
CCNDBP1-210ENST00000566882 SLC3A2P08195 630 aaKnown RBP11.69□□□□□ -0.54
CCNDBP1-210ENST00000566882 FLT1P17948 1338 aa11.69□□□□□ -0.54
CCNDBP1-210ENST00000566882 SCNN1DP51172 638 aa11.69□□□□□ -0.54
CCNDBP1-210ENST00000566882 GSTO1P78417 241 aa11.69□□□□□ -0.54
CCNDBP1-210ENST00000566882 RESP18Q5W5W9 173 aa11.69□□□□□ -0.54
CCNDBP1-210ENST00000566882 FOXP4Q8IVH2 680 aaPredicted RBP11.69□□□□□ -0.54
CCNDBP1-210ENST00000566882 SP8Q8IXZ3 490 aa11.69□□□□□ -0.54
CCNDBP1-210ENST00000566882 TRIM5Q9C035 493 aa11.69□□□□□ -0.54
CCNDBP1-210ENST00000566882 ATP6V0A2Q9Y487 856 aa11.69□□□□□ -0.54
CCNDBP1-210ENST00000566882 PCDHAC2Q9Y5I4 1007 aa11.69□□□□□ -0.54
CCNDBP1-210ENST00000566882 DDAH1O94760 285 aa11.69□□□□□ -0.54
CCNDBP1-210ENST00000566882 PCP11498 1178 aaKnown RBP11.69□□□□□ -0.54
CCNDBP1-210ENST00000566882 PTGS1P23219 599 aa11.69□□□□□ -0.54
CCNDBP1-210ENST00000566882 PICALMQ13492 652 aa11.69□□□□□ -0.54
CCNDBP1-210ENST00000566882 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.69□□□□□ -0.54
CCNDBP1-210ENST00000566882 GRAMD1CQ8IYS0 662 aa11.69□□□□□ -0.54
CCNDBP1-210ENST00000566882 PNMA1Q8ND90 353 aa11.69□□□□□ -0.54
CCNDBP1-210ENST00000566882 CTCFLQ8NI51 663 aaPredicted RBP11.69□□□□□ -0.54
CCNDBP1-210ENST00000566882 DAGLAQ9Y4D2 1042 aa11.69□□□□□ -0.54
CCNDBP1-210ENST00000566882 TSPY3P0CV98 308 aa11.68□□□□□ -0.54
CCNDBP1-210ENST00000566882 TSPY8P0CW00 308 aa11.68□□□□□ -0.54
CCNDBP1-210ENST00000566882 ZNF75DP51815 510 aa11.68□□□□□ -0.54
CCNDBP1-210ENST00000566882 TYW1BQ6NUM6 668 aa11.68□□□□□ -0.54
CCNDBP1-210ENST00000566882 METTL16Q86W50 562 aaKnown RBP11.68□□□□□ -0.54
CCNDBP1-210ENST00000566882 PLA2G4DQ86XP0 818 aa11.68□□□□□ -0.54
CCNDBP1-210ENST00000566882 CLEC10AQ8IUN9 316 aa11.68□□□□□ -0.54
CCNDBP1-210ENST00000566882 NOL10Q9BSC4 688 aaKnown RBP11.68□□□□□ -0.54
CCNDBP1-210ENST00000566882 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.68□□□□□ -0.54
CCNDBP1-210ENST00000566882 PYCARDQ9ULZ3 195 aa11.68□□□□□ -0.54
CCNDBP1-210ENST00000566882 STX8Q9UNK0 236 aa11.68□□□□□ -0.54
CCNDBP1-210ENST00000566882 PLSCR1O15162 318 aa11.68□□□□□ -0.54
CCNDBP1-210ENST00000566882 CDK8P49336 464 aa11.68□□□□□ -0.54
CCNDBP1-210ENST00000566882 LRMPQ12912 555 aa11.68□□□□□ -0.54
CCNDBP1-210ENST00000566882 NLGN1Q8N2Q7 840 aa11.68□□□□□ -0.54
CCNDBP1-210ENST00000566882 PDILTQ8N807 584 aa11.68□□□□□ -0.54
CCNDBP1-210ENST00000566882 KRI1Q8N9T8 703 aaKnown RBP11.68□□□□□ -0.54
CCNDBP1-210ENST00000566882 RGS22Q8NE09 1264 aa11.68□□□□□ -0.54
CCNDBP1-210ENST00000566882 TNFRSF25Q93038 417 aa11.68□□□□□ -0.54
CCNDBP1-210ENST00000566882 ZNF622Q969S3 477 aaKnown RBP eCLIP11.68□□□□□ -0.54
CCNDBP1-210ENST00000566882 KAT14Q9H8E8 782 aa11.68□□□□□ -0.54
CCNDBP1-210ENST00000566882 DDX4Q9NQI0 724 aaKnown RBP11.68□□□□□ -0.54
CCNDBP1-210ENST00000566882 RBM28Q9NW13 759 aaKnown RBP11.68□□□□□ -0.54
CCNDBP1-210ENST00000566882 SNED1Q8TER0 1413 aa11.68□□□□□ -0.54
CCNDBP1-210ENST00000566882 MYH1P12882 1939 aa11.67□□□□□ -0.54
CCNDBP1-210ENST00000566882 CYTH3O43739 400 aa11.67□□□□□ -0.54
CCNDBP1-210ENST00000566882 LDHCP07864 332 aa11.67□□□□□ -0.54
CCNDBP1-210ENST00000566882 KRT2P35908 639 aa11.67□□□□□ -0.54
CCNDBP1-210ENST00000566882 ZNF174Q15697 407 aa11.67□□□□□ -0.54
CCNDBP1-210ENST00000566882 CCDC144BQ3MJ40 725 aa11.67□□□□□ -0.54
CCNDBP1-210ENST00000566882 RASGRP4Q8TDF6 673 aa11.67□□□□□ -0.54
CCNDBP1-210ENST00000566882 TSC1Q92574 1164 aa11.67□□□□□ -0.54
CCNDBP1-210ENST00000566882 TMEM47Q9BQJ4 181 aa11.67□□□□□ -0.54
CCNDBP1-210ENST00000566882 PDGFDQ9GZP0 370 aaPredicted RBP11.67□□□□□ -0.54
CCNDBP1-210ENST00000566882 DBNDD1Q9H9R9 158 aa11.67□□□□□ -0.54
CCNDBP1-210ENST00000566882 ANO10Q9NW15 660 aa11.67□□□□□ -0.54
CCNDBP1-210ENST00000566882 MAD2L2Q9UI95 211 aa11.67□□□□□ -0.54
CCNDBP1-210ENST00000566882 KCNH3Q9ULD8 1083 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms