RNA–Protein interactions for RNA: ENST00000566600.1

NME3-209, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2

Gene NME3, Length 913 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-209ENST00000566600 PRDM1O75626 825 aa31.01■■■□□ 2.55
NME3-209ENST00000566600 MTMR2Q13614 643 aa31.01■■■□□ 2.55
NME3-209ENST00000566600 IMMTQ16891 758 aaKnown RBP31.01■■■□□ 2.55
NME3-209ENST00000566600 FEZ1Q99689 392 aa31.01■■■□□ 2.55
NME3-209ENST00000566600 TMOD4Q9NZQ9 345 aa31.01■■■□□ 2.55
NME3-209ENST00000566600 DDX52Q9Y2R4 599 aaKnown RBP eCLIP31.01■■■□□ 2.55
NME3-209ENST00000566600 USP14P54578 494 aa31■■■□□ 2.55
NME3-209ENST00000566600 HMGCS2P54868 508 aa31■■■□□ 2.55
NME3-209ENST00000566600 RNF41Q9H4P4 317 aaPredicted RBP31■■■□□ 2.55
NME3-209ENST00000566600 SH2D4AQ9H788 454 aa31■■■□□ 2.55
NME3-209ENST00000566600 ARHGEF10LQ9HCE6 1279 aa31■■■□□ 2.55
NME3-209ENST00000566600 SLC45A1Q9Y2W3 748 aa31■■■□□ 2.55
NME3-209ENST00000566600 ORC4O43929 436 aa30.99■■■□□ 2.55
NME3-209ENST00000566600 FGRP09769 529 aa30.99■■■□□ 2.55
NME3-209ENST00000566600 HAND2P61296 217 aa30.99■■■□□ 2.55
NME3-209ENST00000566600 ICA1Q05084 483 aa30.99■■■□□ 2.55
NME3-209ENST00000566600 USP17L2Q6R6M4 530 aa30.99■■■□□ 2.55
NME3-209ENST00000566600 KIAA1683Q9H0B3 1180 aa30.99■■■□□ 2.55
NME3-209ENST00000566600 U3KPZ7 1027 aaPredicted RBP30.99■■■□□ 2.55
NME3-209ENST00000566600 PDHXO00330 501 aa30.98■■■□□ 2.55
NME3-209ENST00000566600 HSPA8P11142 646 aaKnown RBP30.98■■■□□ 2.55
NME3-209ENST00000566600 PABPC4Q13310 644 aaKnown RBP eCLIP30.98■■■□□ 2.553e-7■■■■□ 23
NME3-209ENST00000566600 TAF1CQ15572 869 aaPredicted RBP30.98■■■□□ 2.55
NME3-209ENST00000566600 GPAT2Q6NUI2 795 aa30.98■■■□□ 2.55
NME3-209ENST00000566600 MFSD6Q6ZSS7 791 aa30.98■■■□□ 2.55
NME3-209ENST00000566600 ZFYVE28Q9HCC9 887 aa30.98■■■□□ 2.55
NME3-209ENST00000566600 AGTPBP1Q9UPW5 1226 aa30.98■■■□□ 2.55
NME3-209ENST00000566600 TSPY3P0CV98 308 aa30.97■■■□□ 2.55
NME3-209ENST00000566600 TSPY8P0CW00 308 aa30.97■■■□□ 2.55
NME3-209ENST00000566600 NT5C2P49902 561 aa30.97■■■□□ 2.55
NME3-209ENST00000566600 AKNAD1Q5T1N1 836 aa30.97■■■□□ 2.55
NME3-209ENST00000566600 STAG1Q8WVM7 1258 aa30.97■■■□□ 2.55
NME3-209ENST00000566600 TSKSQ9UJT2 592 aa30.97■■■□□ 2.55
NME3-209ENST00000566600 LOC285556D6RIA3 1793 aa30.97■■■□□ 2.55
NME3-209ENST00000566600 LAMA4Q16363 1823 aa30.96■■■□□ 2.55
NME3-209ENST00000566600 TBC1D8O95759 1140 aa30.96■■■□□ 2.55
NME3-209ENST00000566600 PTH1RQ03431 593 aa30.96■■■□□ 2.55
NME3-209ENST00000566600 NEDD1Q8NHV4 660 aa30.96■■■□□ 2.55
NME3-209ENST00000566600 ACER1Q8TDN7 264 aa30.96■■■□□ 2.55
NME3-209ENST00000566600 TOMM22Q9NS69 142 aa30.96■■■□□ 2.55
NME3-209ENST00000566600 PLIN4Q96Q06 1357 aa30.95■■■□□ 2.55
NME3-209ENST00000566600 GREB1LQ9C091 1923 aaPredicted RBP30.95■■■□□ 2.55
NME3-209ENST00000566600 TFAP4Q01664 338 aa30.95■■■□□ 2.55
NME3-209ENST00000566600 CRHR2Q13324 411 aa30.95■■■□□ 2.55
NME3-209ENST00000566600 NOM1Q5C9Z4 860 aaKnown RBP30.95■■■□□ 2.55
NME3-209ENST00000566600 PPP4R3BQ5MIZ7 849 aa30.95■■■□□ 2.55
NME3-209ENST00000566600 MAP4K1Q92918 833 aa30.95■■■□□ 2.55
NME3-209ENST00000566600 C12orf42Q96LP6 360 aa30.95■■■□□ 2.55
NME3-209ENST00000566600 GNL3Q9BVP2 549 aaKnown RBP eCLIP30.95■■■□□ 2.55
NME3-209ENST00000566600 TSPY2A6NKD2 308 aa30.94■■■□□ 2.54
NME3-209ENST00000566600 RANBP6O60518 1105 aaKnown RBP30.94■■■□□ 2.54
NME3-209ENST00000566600 LBX1P52954 281 aa30.94■■■□□ 2.54
NME3-209ENST00000566600 PARK7Q99497 189 aaKnown RBP30.94■■■□□ 2.54
NME3-209ENST00000566600 NBPF3Q9H094 633 aa30.94■■■□□ 2.54
NME3-209ENST00000566600 PNMA3Q9UL41 463 aa30.94■■■□□ 2.54
NME3-209ENST00000566600 EEF2P13639 858 aaKnown RBP30.93■■■□□ 2.54
NME3-209ENST00000566600 FAM47AQ5JRC9 791 aa30.93■■■□□ 2.54
NME3-209ENST00000566600 TBC1D10CQ8IV04 446 aa30.93■■■□□ 2.54
NME3-209ENST00000566600 INCENPQ9NQS7 918 aa30.93■■■□□ 2.54
NME3-209ENST00000566600 EMILIN3Q9NT22 766 aa30.93■■■□□ 2.54
NME3-209ENST00000566600 NYAP2Q9P242 653 aa30.93■■■□□ 2.54
NME3-209ENST00000566600 TMX2Q9Y320 296 aa30.93■■■□□ 2.54
NME3-209ENST00000566600 IGKV6D-41A0A0C4DH26 115 aa30.92■■■□□ 2.54
NME3-209ENST00000566600 A0A1W2PRG0 241 aa30.92■■■□□ 2.54
NME3-209ENST00000566600 ATP2B2Q01814 1243 aa30.92■■■□□ 2.54
NME3-209ENST00000566600 ZYXQ15942 572 aaKnown RBP30.92■■■□□ 2.54
NME3-209ENST00000566600 RRP12Q5JTH9 1297 aaKnown RBP30.92■■■□□ 2.54
NME3-209ENST00000566600 TREML2Q5T2D2 321 aa30.92■■■□□ 2.54
NME3-209ENST00000566600 CLEC10AQ8IUN9 316 aa30.92■■■□□ 2.54
NME3-209ENST00000566600 SIAH1Q8IUQ4 282 aa30.92■■■□□ 2.54
NME3-209ENST00000566600 ANO2Q9NQ90 1003 aa30.92■■■□□ 2.54
NME3-209ENST00000566600 PRDM10Q9NQV6 1147 aa30.92■■■□□ 2.54
NME3-209ENST00000566600 TACC3Q9Y6A5 838 aa30.92■■■□□ 2.54
NME3-209ENST00000566600 OSBPP22059 807 aa30.91■■■□□ 2.54
NME3-209ENST00000566600 LSG1Q9H089 658 aaKnown RBP30.91■■■□□ 2.54
NME3-209ENST00000566600 MTMR4Q9NYA4 1195 aa30.91■■■□□ 2.54
NME3-209ENST00000566600 GPR25O00155 361 aa30.9■■■□□ 2.54
NME3-209ENST00000566600 HOXA7P31268 230 aaPredicted RBP30.9■■■□□ 2.54
NME3-209ENST00000566600 DGKZQ13574 1117 aa30.9■■■□□ 2.54
NME3-209ENST00000566600 ESR2Q92731 530 aa30.9■■■□□ 2.54
NME3-209ENST00000566600 CEP95Q96GE4 821 aa30.9■■■□□ 2.54
NME3-209ENST00000566600 CNNM2Q9H8M5 875 aa30.9■■■□□ 2.54
NME3-209ENST00000566600 RBM8AQ9Y5S9 174 aaKnown RBP30.9■■■□□ 2.54
NME3-209ENST00000566600 TLR2O60603 784 aa30.89■■■□□ 2.54
NME3-209ENST00000566600 TTLL1O95922 423 aa30.89■■■□□ 2.54
NME3-209ENST00000566600 LPAR1Q92633 364 aa30.89■■■□□ 2.54
NME3-209ENST00000566600 R3HDMLQ9H3Y0 253 aa30.89■■■□□ 2.54
NME3-209ENST00000566600 GOPCQ9HD26 462 aa30.89■■■□□ 2.54
NME3-209ENST00000566600 SYNPO2Q9UMS6 1093 aa30.89■■■□□ 2.54
NME3-209ENST00000566600 KRT23Q9C075 422 aa30.88■■■□□ 2.53
NME3-209ENST00000566600 VCPKMTQ9H867 229 aa30.88■■■□□ 2.53
NME3-209ENST00000566600 VCAM1P19320 739 aa30.87■■■□□ 2.53
NME3-209ENST00000566600 MKL1Q969V6 931 aa30.87■■■□□ 2.53
NME3-209ENST00000566600 TCP11L1Q9NUJ3 509 aa30.87■■■□□ 2.53
NME3-209ENST00000566600 CLIP2Q9UDT6 1046 aa30.87■■■□□ 2.53
NME3-209ENST00000566600 USP17L15C9J2P7 530 aa30.86■■■□□ 2.53
NME3-209ENST00000566600 USP17L13C9JLJ4 530 aa30.86■■■□□ 2.53
NME3-209ENST00000566600 USP17L11C9JVI0 530 aa30.86■■■□□ 2.53
NME3-209ENST00000566600 USP17L18D6R9N7 530 aa30.86■■■□□ 2.53
NME3-209ENST00000566600 USP17L22D6RA61 530 aa30.86■■■□□ 2.53
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms