RNA–Protein interactions for RNA: ENST00000566557.5

SCAMP2-208, Transcript of secretory carrier membrane protein 2, humanhuman

TSL 2

Gene SCAMP2, Length 585 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP2-208ENST00000566557 RRP12Q5JTH9 1297 aaKnown RBP19.4■□□□□ 0.7
SCAMP2-208ENST00000566557 TMEM179Q6ZVK1 233 aa19.4■□□□□ 0.7
SCAMP2-208ENST00000566557 ZNF444Q8N0Y2 327 aaPredicted RBP19.4■□□□□ 0.7
SCAMP2-208ENST00000566557 CCDC17Q96LX7 622 aa19.4■□□□□ 0.7
SCAMP2-208ENST00000566557 FEZ1Q99689 392 aa19.4■□□□□ 0.7
SCAMP2-208ENST00000566557 R3HDMLQ9H3Y0 253 aa19.4■□□□□ 0.7
SCAMP2-208ENST00000566557 PTPRFP10586 1907 aa19.39■□□□□ 0.7
SCAMP2-208ENST00000566557 CETPP11597 493 aa19.39■□□□□ 0.69
SCAMP2-208ENST00000566557 SPP2Q13103 211 aa19.39■□□□□ 0.69
SCAMP2-208ENST00000566557 GADL1Q6ZQY3 521 aa19.39■□□□□ 0.69
SCAMP2-208ENST00000566557 ZNF280CQ8ND82 737 aa19.39■□□□□ 0.69
SCAMP2-208ENST00000566557 TBC1D2Q9BYX2 928 aa19.39■□□□□ 0.69
SCAMP2-208ENST00000566557 ANAPC4Q9UJX5 808 aa19.39■□□□□ 0.69
SCAMP2-208ENST00000566557 KCNH4Q9UQ05 1017 aa19.39■□□□□ 0.69
SCAMP2-208ENST00000566557 AFG3L2Q9Y4W6 797 aa19.39■□□□□ 0.69
SCAMP2-208ENST00000566557 U3KPZ7 1027 aaPredicted RBP19.39■□□□□ 0.69
SCAMP2-208ENST00000566557 HTTP42858 3142 aa19.38■□□□□ 0.69
SCAMP2-208ENST00000566557 CENPFP49454 3210 aa19.38■□□□□ 0.69
SCAMP2-208ENST00000566557 POTEFA5A3E0 1075 aa19.38■□□□□ 0.69
SCAMP2-208ENST00000566557 ATP2B2Q01814 1243 aa19.38■□□□□ 0.69
SCAMP2-208ENST00000566557 MTMR2Q13614 643 aa19.38■□□□□ 0.69
SCAMP2-208ENST00000566557 ZYXQ15942 572 aaKnown RBP19.38■□□□□ 0.69
SCAMP2-208ENST00000566557 CLEC10AQ8IUN9 316 aa19.38■□□□□ 0.69
SCAMP2-208ENST00000566557 TBC1D10CQ8IV04 446 aa19.38■□□□□ 0.69
SCAMP2-208ENST00000566557 BRI3BPQ8WY22 251 aa19.38■□□□□ 0.69
SCAMP2-208ENST00000566557 TSPY2A6NKD2 308 aa19.37■□□□□ 0.69
SCAMP2-208ENST00000566557 CXCL11O14625 94 aa19.37■□□□□ 0.69
SCAMP2-208ENST00000566557 TSPY3P0CV98 308 aa19.37■□□□□ 0.69
SCAMP2-208ENST00000566557 TSPY8P0CW00 308 aa19.37■□□□□ 0.69
SCAMP2-208ENST00000566557 INHBEP58166 350 aa19.37■□□□□ 0.69
SCAMP2-208ENST00000566557 ICA1Q05084 483 aa19.37■□□□□ 0.69
SCAMP2-208ENST00000566557 FAM47AQ5JRC9 791 aa19.37■□□□□ 0.69
SCAMP2-208ENST00000566557 MS4A4AQ96JQ5 239 aa19.37■□□□□ 0.69
SCAMP2-208ENST00000566557 INCENPQ9NQS7 918 aa19.37■□□□□ 0.69
SCAMP2-208ENST00000566557 RBM8AQ9Y5S9 174 aaKnown RBP19.37■□□□□ 0.69
SCAMP2-208ENST00000566557 GREB1LQ9C091 1923 aaPredicted RBP19.37■□□□□ 0.69
SCAMP2-208ENST00000566557 LOC285556D6RIA3 1793 aa19.37■□□□□ 0.69
SCAMP2-208ENST00000566557 RANBP6O60518 1105 aaKnown RBP19.36■□□□□ 0.69
SCAMP2-208ENST00000566557 GUCY1A2P33402 732 aa19.36■□□□□ 0.69
SCAMP2-208ENST00000566557 FXR1P51114 621 aaKnown RBP eCLIP19.36■□□□□ 0.69
SCAMP2-208ENST00000566557 HMGCS2P54868 508 aa19.36■□□□□ 0.69
SCAMP2-208ENST00000566557 AKNAD1Q5T1N1 836 aa19.36■□□□□ 0.69
SCAMP2-208ENST00000566557 OTUD7BQ6GQQ9 843 aa19.36■□□□□ 0.69
SCAMP2-208ENST00000566557 MFSD6Q6ZSS7 791 aa19.36■□□□□ 0.69
SCAMP2-208ENST00000566557 IFNL1Q8IU54 200 aa19.36■□□□□ 0.69
SCAMP2-208ENST00000566557 WDR18Q9BV38 432 aa19.36■□□□□ 0.69
SCAMP2-208ENST00000566557 RNF41Q9H4P4 317 aaPredicted RBP19.36■□□□□ 0.69
SCAMP2-208ENST00000566557 DDX52Q9Y2R4 599 aaKnown RBP eCLIP19.36■□□□□ 0.69
SCAMP2-208ENST00000566557 TRIM17Q9Y577 477 aa19.36■□□□□ 0.69
SCAMP2-208ENST00000566557 NEDD4P46934 1319 aa19.35■□□□□ 0.69
SCAMP2-208ENST00000566557 A0A0G2JLL6 359 aaPredicted RBP19.35■□□□□ 0.69
SCAMP2-208ENST00000566557 USP17L10C9JJH3 530 aa19.35■□□□□ 0.69
SCAMP2-208ENST00000566557 IGF2BP3O00425 579 aaKnown RBP eCLIP19.35■□□□□ 0.69
SCAMP2-208ENST00000566557 TFAP4Q01664 338 aa19.35■□□□□ 0.69
SCAMP2-208ENST00000566557 PRRT2Q7Z6L0 340 aaPredicted RBP19.35■□□□□ 0.69
SCAMP2-208ENST00000566557 STAG1Q8WVM7 1258 aa19.35■□□□□ 0.69
SCAMP2-208ENST00000566557 CFHR5Q9BXR6 569 aa19.35■□□□□ 0.69
SCAMP2-208ENST00000566557 LSG1Q9H089 658 aaKnown RBP19.35■□□□□ 0.69
SCAMP2-208ENST00000566557 NBPF3Q9H094 633 aa19.35■□□□□ 0.69
SCAMP2-208ENST00000566557 ARHGEF10LQ9HCE6 1279 aa19.35■□□□□ 0.69
SCAMP2-208ENST00000566557 TMOD4Q9NZQ9 345 aa19.35■□□□□ 0.69
SCAMP2-208ENST00000566557 TACC3Q9Y6A5 838 aa19.35■□□□□ 0.69
SCAMP2-208ENST00000566557 FASTKD5Q7L8L6 764 aaKnown RBP19.34■□□□□ 0.69
SCAMP2-208ENST00000566557 ACER1Q8TDN7 264 aa19.34■□□□□ 0.69
SCAMP2-208ENST00000566557 TESPA1A2RU30 521 aaPredicted RBP19.33■□□□□ 0.68
SCAMP2-208ENST00000566557 BTBD19C9JJ37 291 aa19.33■□□□□ 0.68
SCAMP2-208ENST00000566557 ORC4O43929 436 aa19.33■□□□□ 0.68
SCAMP2-208ENST00000566557 RAD21O60216 631 aa19.33■□□□□ 0.68
SCAMP2-208ENST00000566557 ALDH1A1P00352 501 aa19.33■□□□□ 0.68
SCAMP2-208ENST00000566557 BACE1P56817 501 aa19.33■□□□□ 0.68
SCAMP2-208ENST00000566557 FAM43AQ8N2R8 423 aa19.33■□□□□ 0.68
SCAMP2-208ENST00000566557 MAP4K1Q92918 833 aa19.33■□□□□ 0.68
SCAMP2-208ENST00000566557 PTPN18Q99952 460 aa19.33■□□□□ 0.68
SCAMP2-208ENST00000566557 SH2D4AQ9H788 454 aa19.33■□□□□ 0.68
SCAMP2-208ENST00000566557 KANSL2Q9H9L4 492 aa19.33■□□□□ 0.68
SCAMP2-208ENST00000566557 MYH4Q9Y623 1939 aa19.33■□□□□ 0.68
SCAMP2-208ENST00000566557 PLIN4Q96Q06 1357 aa19.32■□□□□ 0.68
SCAMP2-208ENST00000566557 CYP21A2P08686 494 aa19.32■□□□□ 0.68
SCAMP2-208ENST00000566557 PCP11498 1178 aaKnown RBP19.32■□□□□ 0.68
SCAMP2-208ENST00000566557 EEF2P13639 858 aaKnown RBP19.32■□□□□ 0.68
SCAMP2-208ENST00000566557 TAF1CQ15572 869 aaPredicted RBP19.32■□□□□ 0.68
SCAMP2-208ENST00000566557 USP17L2Q6R6M4 530 aa19.32■□□□□ 0.68
SCAMP2-208ENST00000566557 OTOP1Q7RTM1 612 aa19.32■□□□□ 0.68
SCAMP2-208ENST00000566557 C19orf81C9J6K1 198 aa19.31■□□□□ 0.68
SCAMP2-208ENST00000566557 USP14P54578 494 aa19.31■□□□□ 0.68
SCAMP2-208ENST00000566557 ANKRD23Q86SG2 305 aa19.31■□□□□ 0.68
SCAMP2-208ENST00000566557 PROCA1Q8NCQ7 364 aaPredicted RBP19.31■□□□□ 0.68
SCAMP2-208ENST00000566557 NEDD1Q8NHV4 660 aa19.31■□□□□ 0.68
SCAMP2-208ENST00000566557 ESR2Q92731 530 aa19.31■□□□□ 0.68
SCAMP2-208ENST00000566557 CEP95Q96GE4 821 aa19.31■□□□□ 0.68
SCAMP2-208ENST00000566557 GNL3Q9BVP2 549 aaKnown RBP eCLIP19.31■□□□□ 0.68
SCAMP2-208ENST00000566557 AGTPBP1Q9UPW5 1226 aa19.31■□□□□ 0.68
SCAMP2-208ENST00000566557 A0A1W2PRG0 241 aa19.3■□□□□ 0.68
SCAMP2-208ENST00000566557 B4E1Z4 1266 aa19.3■□□□□ 0.68
SCAMP2-208ENST00000566557 PDHXO00330 501 aa19.3■□□□□ 0.68
SCAMP2-208ENST00000566557 REC8O95072 547 aa19.3■□□□□ 0.68
SCAMP2-208ENST00000566557 EN2P19622 333 aaPredicted RBP19.3■□□□□ 0.68
SCAMP2-208ENST00000566557 TRDNQ13061 729 aa19.3■□□□□ 0.68
SCAMP2-208ENST00000566557 MOGSQ13724 837 aa19.3■□□□□ 0.68
SCAMP2-208ENST00000566557 SH3D19Q5HYK7 790 aa19.3■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 115.9 ms