RNA–Protein interactions for RNA: ENST00000566087.5

NSMCE1-211, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 5

Gene NSMCE1, Length 878 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Exosome, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-211ENST00000566087 PHIPQ8WWQ0 1821 aa12.81□□□□□ -0.36
NSMCE1-211ENST00000566087 TCRBV5S4A2TA0A5A2 114 aa12.8□□□□□ -0.36
NSMCE1-211ENST00000566087 USP17L5A8MUK1 530 aa12.8□□□□□ -0.36
NSMCE1-211ENST00000566087 PABPC4Q13310 644 aaKnown RBP eCLIP12.8□□□□□ -0.36
NSMCE1-211ENST00000566087 CHD1LQ86WJ1 897 aa12.8□□□□□ -0.36
NSMCE1-211ENST00000566087 ANKRD13CQ8N6S4 541 aa12.8□□□□□ -0.36
NSMCE1-211ENST00000566087 SMCR8Q8TEV9 937 aaPredicted RBP12.8□□□□□ -0.36
NSMCE1-211ENST00000566087 APPBP2Q92624 585 aa12.8□□□□□ -0.36
NSMCE1-211ENST00000566087 PAWRQ96IZ0 340 aaKnown RBP12.8□□□□□ -0.36
NSMCE1-211ENST00000566087 SAP30BPQ9UHR5 308 aaKnown RBP12.8□□□□□ -0.36
NSMCE1-211ENST00000566087 DOCK1Q14185 1865 aa12.8□□□□□ -0.36
NSMCE1-211ENST00000566087 MYO5AQ9Y4I1 1855 aaKnown RBP12.79□□□□□ -0.36
NSMCE1-211ENST00000566087 TRIM75PA6NK02 468 aa12.79□□□□□ -0.36
NSMCE1-211ENST00000566087 MBD4O95243 580 aa12.79□□□□□ -0.36
NSMCE1-211ENST00000566087 PDE1AP54750 535 aa12.79□□□□□ -0.36
NSMCE1-211ENST00000566087 GIMAP6Q6P9H5 292 aa12.79□□□□□ -0.36
NSMCE1-211ENST00000566087 EDC3Q96F86 508 aaKnown RBP12.79□□□□□ -0.36
NSMCE1-211ENST00000566087 FSD1Q9BTV5 496 aa12.79□□□□□ -0.36
NSMCE1-211ENST00000566087 NACAP1Q9BZK3 213 aa12.79□□□□□ -0.36
NSMCE1-211ENST00000566087 ZNF287Q9HBT7 754 aa12.79□□□□□ -0.36
NSMCE1-211ENST00000566087 PAK6Q9NQU5 681 aaPredicted RBP12.79□□□□□ -0.36
NSMCE1-211ENST00000566087 SWAP70Q9UH65 585 aa12.79□□□□□ -0.36
NSMCE1-211ENST00000566087 SLC4A4Q9Y6R1 1079 aa12.79□□□□□ -0.36
NSMCE1-211ENST00000566087 DOCK3Q8IZD9 2030 aa12.79□□□□□ -0.36
NSMCE1-211ENST00000566087 C19orf81C9J6K1 198 aa12.78□□□□□ -0.36
NSMCE1-211ENST00000566087 CERKLQ49MI3 558 aaPredicted RBP12.78□□□□□ -0.36
NSMCE1-211ENST00000566087 TREML2Q5T2D2 321 aa12.78□□□□□ -0.36
NSMCE1-211ENST00000566087 C7orf61Q8IZ16 206 aa12.78□□□□□ -0.36
NSMCE1-211ENST00000566087 ZNF280CQ8ND82 737 aa12.78□□□□□ -0.36
NSMCE1-211ENST00000566087 PXYLP1Q8TE99 480 aa12.78□□□□□ -0.36
NSMCE1-211ENST00000566087 LNPKQ9C0E8 428 aa12.78□□□□□ -0.36
NSMCE1-211ENST00000566087 ARMT1Q9H993 441 aa12.78□□□□□ -0.36
NSMCE1-211ENST00000566087 ZMYND8Q9ULU4 1186 aaPredicted RBP12.78□□□□□ -0.36
NSMCE1-211ENST00000566087 SLC45A1Q9Y2W3 748 aa12.78□□□□□ -0.36
NSMCE1-211ENST00000566087 A0A1W2PPC1 479 aa12.77□□□□□ -0.37
NSMCE1-211ENST00000566087 FAM196BA6NMK8 535 aa12.77□□□□□ -0.37
NSMCE1-211ENST00000566087 APPP05067 770 aa12.77□□□□□ -0.37
NSMCE1-211ENST00000566087 TRIM32Q13049 653 aa12.77□□□□□ -0.37
NSMCE1-211ENST00000566087 IRF5Q13568 498 aa12.77□□□□□ -0.37
NSMCE1-211ENST00000566087 TATDN1Q6P1N9 297 aa12.77□□□□□ -0.37
NSMCE1-211ENST00000566087 LCORLQ8N3X6 602 aa12.77□□□□□ -0.37
NSMCE1-211ENST00000566087 PI4K2BQ8TCG2 481 aa12.77□□□□□ -0.37
NSMCE1-211ENST00000566087 WDR18Q9BV38 432 aa12.77□□□□□ -0.37
NSMCE1-211ENST00000566087 CRISPLD2Q9H0B8 497 aa12.77□□□□□ -0.37
NSMCE1-211ENST00000566087 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.77□□□□□ -0.37
NSMCE1-211ENST00000566087 DCP1AQ9NPI6 582 aaPredicted RBP12.77□□□□□ -0.37
NSMCE1-211ENST00000566087 TMOD4Q9NZQ9 345 aa12.77□□□□□ -0.37
NSMCE1-211ENST00000566087 PNMA3Q9UL41 463 aa12.77□□□□□ -0.37
NSMCE1-211ENST00000566087 TRIM6-TRIM34B2RNG4 842 aa12.76□□□□□ -0.37
NSMCE1-211ENST00000566087 SLC3A2P08195 630 aaKnown RBP12.76□□□□□ -0.37
NSMCE1-211ENST00000566087 SYN1P17600 705 aa12.76□□□□□ -0.37
NSMCE1-211ENST00000566087 MFAP1P55081 439 aaKnown RBP12.76□□□□□ -0.37
NSMCE1-211ENST00000566087 SPP2Q13103 211 aa12.76□□□□□ -0.37
NSMCE1-211ENST00000566087 ABCB5Q2M3G0 1257 aa12.76□□□□□ -0.37
NSMCE1-211ENST00000566087 Q7L0L9 218 aa12.76□□□□□ -0.37
NSMCE1-211ENST00000566087 NECAB2Q7Z6G3 386 aa12.76□□□□□ -0.37
NSMCE1-211ENST00000566087 SKAP1Q86WV1 359 aa12.76□□□□□ -0.37
NSMCE1-211ENST00000566087 PROCA1Q8NCQ7 364 aaPredicted RBP12.76□□□□□ -0.37
NSMCE1-211ENST00000566087 COA7Q96BR5 231 aa12.76□□□□□ -0.37
NSMCE1-211ENST00000566087 CCDC17Q96LX7 622 aa12.76□□□□□ -0.37
NSMCE1-211ENST00000566087 STRBPQ96SI9 672 aaKnown RBP12.76□□□□□ -0.37
NSMCE1-211ENST00000566087 ARPP21Q9UBL0 812 aaPredicted RBP12.76□□□□□ -0.37
NSMCE1-211ENST00000566087 AGTPBP1Q9UPW5 1226 aa12.76□□□□□ -0.37
NSMCE1-211ENST00000566087 MYH1P12882 1939 aa12.76□□□□□ -0.37
NSMCE1-211ENST00000566087 A0A0C4DFX4 3053 aa12.75□□□□□ -0.37
NSMCE1-211ENST00000566087 PATL2C9JE40 543 aaKnown RBP12.75□□□□□ -0.37
NSMCE1-211ENST00000566087 USP17L10C9JJH3 530 aa12.75□□□□□ -0.37
NSMCE1-211ENST00000566087 HIP1O00291 1037 aa12.75□□□□□ -0.37
NSMCE1-211ENST00000566087 DDX60LQ5H9U9 1706 aaKnown RBP12.75□□□□□ -0.37
NSMCE1-211ENST00000566087 FOCADQ5VW36 1801 aa12.75□□□□□ -0.37
NSMCE1-211ENST00000566087 TSHZ3Q63HK5 1081 aa12.75□□□□□ -0.37
NSMCE1-211ENST00000566087 SDR42E1Q8WUS8 393 aa12.75□□□□□ -0.37
NSMCE1-211ENST00000566087 PUS7LQ9H0K6 701 aaKnown RBP12.75□□□□□ -0.37
NSMCE1-211ENST00000566087 OSBPL3Q9H4L5 887 aa12.75□□□□□ -0.37
NSMCE1-211ENST00000566087 HELLSQ9NRZ9 838 aa12.75□□□□□ -0.37
NSMCE1-211ENST00000566087 MYH7P12883 1935 aa12.74□□□□□ -0.37
NSMCE1-211ENST00000566087 ATAD5Q96QE3 1844 aa12.74□□□□□ -0.37
NSMCE1-211ENST00000566087 USP17L12C9JPN9 530 aa12.74□□□□□ -0.37
NSMCE1-211ENST00000566087 USP17L21D6R901 530 aa12.74□□□□□ -0.37
NSMCE1-211ENST00000566087 PDE4AP27815 886 aa12.74□□□□□ -0.37
NSMCE1-211ENST00000566087 PLCD1P51178 756 aa12.74□□□□□ -0.37
NSMCE1-211ENST00000566087 USP14P54578 494 aa12.74□□□□□ -0.37
NSMCE1-211ENST00000566087 BACE1P56817 501 aa12.74□□□□□ -0.37
NSMCE1-211ENST00000566087 SBK1Q52WX2 424 aa12.74□□□□□ -0.37
NSMCE1-211ENST00000566087 C12orf60Q5U649 245 aa12.74□□□□□ -0.37
NSMCE1-211ENST00000566087 DEFB123Q8N688 67 aa12.74□□□□□ -0.37
NSMCE1-211ENST00000566087 OTUD7AQ8TE49 926 aaPredicted RBP12.74□□□□□ -0.37
NSMCE1-211ENST00000566087 GDF15Q99988 308 aa12.74□□□□□ -0.37
NSMCE1-211ENST00000566087 ZBTB21Q9ULJ3 1066 aa12.74□□□□□ -0.37
NSMCE1-211ENST00000566087 LOC285556D6RIA3 1793 aa12.74□□□□□ -0.37
NSMCE1-211ENST00000566087 SALL3Q9BXA9 1300 aa12.73□□□□□ -0.37
NSMCE1-211ENST00000566087 MPHOSPH10O00566 681 aaKnown RBP12.73□□□□□ -0.37
NSMCE1-211ENST00000566087 GPAA1O43292 621 aa12.73□□□□□ -0.37
NSMCE1-211ENST00000566087 PEX10O60683 326 aa12.73□□□□□ -0.37
NSMCE1-211ENST00000566087 GH2P01242 217 aa12.73□□□□□ -0.37
NSMCE1-211ENST00000566087 DSG3P32926 999 aa12.73□□□□□ -0.37
NSMCE1-211ENST00000566087 TDO2P48775 406 aa12.73□□□□□ -0.37
NSMCE1-211ENST00000566087 MNX1P50219 401 aaPredicted RBP12.73□□□□□ -0.37
NSMCE1-211ENST00000566087 RAB3GAP1Q15042 981 aa12.73□□□□□ -0.37
NSMCE1-211ENST00000566087 FAM110CQ1W6H9 321 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms