RNA–Protein interactions for RNA: ENST00000565393.2

TCF4-228, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 314 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-228ENST00000565393 DCP1AQ9NPI6 582 aaPredicted RBP7.73□□□□□ -1.17
TCF4-228ENST00000565393 ATP8A2Q9NTI2 1148 aa7.73□□□□□ -1.17
TCF4-228ENST00000565393 ECHDC1Q9NTX5 307 aa7.73□□□□□ -1.17
TCF4-228ENST00000565393 HOXC10Q9NYD6 342 aa7.73□□□□□ -1.17
TCF4-228ENST00000565393 NR2E3Q9Y5X4 410 aa7.73□□□□□ -1.17
TCF4-228ENST00000565393 SLC4A4Q9Y6R1 1079 aa7.73□□□□□ -1.17
TCF4-228ENST00000565393 OTOFQ9HC10 1997 aa7.72□□□□□ -1.17
TCF4-228ENST00000565393 RAD21O60216 631 aa7.72□□□□□ -1.17
TCF4-228ENST00000565393 EVI5O60447 810 aa7.72□□□□□ -1.17
TCF4-228ENST00000565393 FARP2O94887 1054 aaPredicted RBP7.72□□□□□ -1.17
TCF4-228ENST00000565393 HMGCRP04035 888 aa7.72□□□□□ -1.17
TCF4-228ENST00000565393 CHGBP05060 677 aa7.72□□□□□ -1.17
TCF4-228ENST00000565393 APPP05067 770 aa7.72□□□□□ -1.17
TCF4-228ENST00000565393 CAPN2P17655 700 aa7.72□□□□□ -1.17
TCF4-228ENST00000565393 ERVK-9P63128 1117 aa7.72□□□□□ -1.17
TCF4-228ENST00000565393 ERVK-24P63145 666 aa7.72□□□□□ -1.17
TCF4-228ENST00000565393 CCNA1P78396 465 aa7.72□□□□□ -1.17
TCF4-228ENST00000565393 ATP2B2Q01814 1243 aa7.72□□□□□ -1.17
TCF4-228ENST00000565393 EVX2Q03828 476 aa7.72□□□□□ -1.17
TCF4-228ENST00000565393 GABPAQ06546 454 aa7.72□□□□□ -1.17
TCF4-228ENST00000565393 TRIM32Q13049 653 aa7.72□□□□□ -1.17
TCF4-228ENST00000565393 COG2Q14746 738 aa7.72□□□□□ -1.17
TCF4-228ENST00000565393 GPR142Q7Z601 462 aa7.72□□□□□ -1.17
TCF4-228ENST00000565393 TRMT44Q8IYL2 757 aaKnown RBP7.72□□□□□ -1.17
TCF4-228ENST00000565393 STK11IPQ8N1F8 1099 aa7.72□□□□□ -1.17
TCF4-228ENST00000565393 SLC44A5Q8NCS7 719 aa7.72□□□□□ -1.17
TCF4-228ENST00000565393 SHISA4Q96DD7 197 aa7.72□□□□□ -1.17
TCF4-228ENST00000565393 GPATCH3Q96I76 525 aa7.72□□□□□ -1.17
TCF4-228ENST00000565393 XRN2Q9H0D6 950 aaKnown RBP eCLIP7.72□□□□□ -1.17
TCF4-228ENST00000565393 DCTPP1Q9H773 170 aa7.72□□□□□ -1.17
TCF4-228ENST00000565393 ZBTB47Q9UFB7 747 aaPredicted RBP7.72□□□□□ -1.17
TCF4-228ENST00000565393 SWAP70Q9UH65 585 aa7.72□□□□□ -1.17
TCF4-228ENST00000565393 COLQQ9Y215 455 aaPredicted RBP7.72□□□□□ -1.17
TCF4-228ENST00000565393 RABGAP1Q9Y3P9 1069 aa7.72□□□□□ -1.17
TCF4-228ENST00000565393 RPTORQ8N122 1335 aa7.72□□□□□ -1.17
TCF4-228ENST00000565393 CYP2D7A0A087X1C5 515 aa7.71□□□□□ -1.18
TCF4-228ENST00000565393 XRCC5P13010 732 aaKnown RBP7.71□□□□□ -1.18
TCF4-228ENST00000565393 VCAM1P19320 739 aa7.71□□□□□ -1.18
TCF4-228ENST00000565393 GUCY1A2P33402 732 aa7.71□□□□□ -1.18
TCF4-228ENST00000565393 RGS2P41220 211 aa7.71□□□□□ -1.18
TCF4-228ENST00000565393 CDK8P49336 464 aa7.71□□□□□ -1.18
TCF4-228ENST00000565393 UBE3CQ15386 1083 aa7.71□□□□□ -1.18
TCF4-228ENST00000565393 C12orf60Q5U649 245 aa7.71□□□□□ -1.18
TCF4-228ENST00000565393 TMEM179Q6ZVK1 233 aa7.71□□□□□ -1.18
TCF4-228ENST00000565393 NECAB2Q7Z6G3 386 aa7.71□□□□□ -1.18
TCF4-228ENST00000565393 SOCS4Q8WXH5 440 aa7.71□□□□□ -1.18
TCF4-228ENST00000565393 PAWRQ96IZ0 340 aaKnown RBP7.71□□□□□ -1.18
TCF4-228ENST00000565393 C12orf42Q96LP6 360 aa7.71□□□□□ -1.18
TCF4-228ENST00000565393 CCDC17Q96LX7 622 aa7.71□□□□□ -1.18
TCF4-228ENST00000565393 TANGO6Q9C0B7 1094 aa7.71□□□□□ -1.18
TCF4-228ENST00000565393 PUS7LQ9H0K6 701 aaKnown RBP7.71□□□□□ -1.18
TCF4-228ENST00000565393 PORCNQ9H237 461 aa7.71□□□□□ -1.18
TCF4-228ENST00000565393 ARHGEF10LQ9HCE6 1279 aa7.71□□□□□ -1.18
TCF4-228ENST00000565393 IVNS1ABPQ9Y6Y0 642 aa7.71□□□□□ -1.18
TCF4-228ENST00000565393 AK9Q5TCS8 1911 aa7.71□□□□□ -1.18
TCF4-228ENST00000565393 MYH2Q9UKX2 1941 aa7.7□□□□□ -1.18
TCF4-228ENST00000565393 A0A1W2PRG0 241 aa7.7□□□□□ -1.18
TCF4-228ENST00000565393 MINDY4BA8MYZ0 360 aa7.7□□□□□ -1.18
TCF4-228ENST00000565393 RNF113AO15541 343 aaKnown RBP7.7□□□□□ -1.18
TCF4-228ENST00000565393 AKR1B1P15121 316 aa7.7□□□□□ -1.18
TCF4-228ENST00000565393 ZKSCAN1P17029 563 aaPredicted RBP7.7□□□□□ -1.18
TCF4-228ENST00000565393 CNGA1P29973 690 aa7.7□□□□□ -1.18
TCF4-228ENST00000565393 CACNB2Q08289 660 aaPredicted RBP7.7□□□□□ -1.18
TCF4-228ENST00000565393 MAP2K5Q13163 448 aa7.7□□□□□ -1.18
TCF4-228ENST00000565393 PLS1Q14651 629 aa7.7□□□□□ -1.18
TCF4-228ENST00000565393 CCL14Q16627 93 aa7.7□□□□□ -1.18
TCF4-228ENST00000565393 LRRFIP1Q32MZ4 808 aaKnown RBP7.7□□□□□ -1.18
TCF4-228ENST00000565393 MFSD14CQ5VZR4 134 aa7.7□□□□□ -1.18
TCF4-228ENST00000565393 TSHZ3Q63HK5 1081 aa7.7□□□□□ -1.18
TCF4-228ENST00000565393 CTR9Q6PD62 1173 aa7.7□□□□□ -1.18
TCF4-228ENST00000565393 POTEEQ6S8J3 1075 aa7.7□□□□□ -1.18
TCF4-228ENST00000565393 DPP9Q86TI2 863 aa7.7□□□□□ -1.18
TCF4-228ENST00000565393 SPICE1Q8N0Z3 855 aa7.7□□□□□ -1.18
TCF4-228ENST00000565393 TRIB2Q92519 343 aa7.7□□□□□ -1.18
TCF4-228ENST00000565393 STRBPQ96SI9 672 aaKnown RBP7.7□□□□□ -1.18
TCF4-228ENST00000565393 CRISPLD2Q9H0B8 497 aa7.7□□□□□ -1.18
TCF4-228ENST00000565393 SH2D4AQ9H788 454 aa7.7□□□□□ -1.18
TCF4-228ENST00000565393 MKNK2Q9HBH9 465 aa7.7□□□□□ -1.18
TCF4-228ENST00000565393 PAK6Q9NQU5 681 aaPredicted RBP7.7□□□□□ -1.18
TCF4-228ENST00000565393 BTBD7Q9P203 1132 aa7.7□□□□□ -1.18
TCF4-228ENST00000565393 SLC15A5A6NIM6 579 aa7.69□□□□□ -1.18
TCF4-228ENST00000565393 SMIM22K7EJ46 135 aa7.69□□□□□ -1.18
TCF4-228ENST00000565393 ERC2O15083 957 aa7.69□□□□□ -1.18
TCF4-228ENST00000565393 CNMDO75829 334 aa7.69□□□□□ -1.18
TCF4-228ENST00000565393 FLOT1O75955 427 aa7.69□□□□□ -1.18
TCF4-228ENST00000565393 EEF2P13639 858 aaKnown RBP7.69□□□□□ -1.18
TCF4-228ENST00000565393 PRKAR2AP13861 404 aaKnown RBP7.69□□□□□ -1.18
TCF4-228ENST00000565393 PTPREP23469 700 aa7.69□□□□□ -1.18
TCF4-228ENST00000565393 ICA1Q05084 483 aa7.69□□□□□ -1.18
TCF4-228ENST00000565393 MORN1Q5T089 497 aa7.69□□□□□ -1.18
TCF4-228ENST00000565393 ANKRD45Q5TZF3 282 aa7.69□□□□□ -1.18
TCF4-228ENST00000565393 CHRDL2Q6WN34 429 aa7.69□□□□□ -1.18
TCF4-228ENST00000565393 UBE2Q1Q7Z7E8 422 aa7.69□□□□□ -1.18
TCF4-228ENST00000565393 NCAPG2Q86XI2 1143 aa7.69□□□□□ -1.18
TCF4-228ENST00000565393 SIAH1Q8IUQ4 282 aa7.69□□□□□ -1.18
TCF4-228ENST00000565393 ZNF444Q8N0Y2 327 aaPredicted RBP7.69□□□□□ -1.18
TCF4-228ENST00000565393 KBTBD3Q8NAB2 608 aa7.69□□□□□ -1.18
TCF4-228ENST00000565393 YTHDC1Q96MU7 727 aaKnown RBP7.69□□□□□ -1.18
TCF4-228ENST00000565393 NBPF3Q9H094 633 aa7.69□□□□□ -1.18
TCF4-228ENST00000565393 KANSL2Q9H9L4 492 aa7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms