RNA–Protein interactions for RNA: ENST00000564236.1

CCNF-203, Transcript of cyclin F, humanhuman

TSL 3

Gene CCNF, Length 789 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNF-203ENST00000564236 MAP3K21Q5TCX8 1036 aa20.25■□□□□ 0.83
CCNF-203ENST00000564236 LCORLQ8N3X6 602 aa20.25■□□□□ 0.83
CCNF-203ENST00000564236 DEFB118Q96PH6 123 aa20.25■□□□□ 0.83
CCNF-203ENST00000564236 XRN2Q9H0D6 950 aaKnown RBP eCLIP20.25■□□□□ 0.83
CCNF-203ENST00000564236 CABP5Q9NP86 173 aa20.25■□□□□ 0.83
CCNF-203ENST00000564236 RABGAP1Q9Y3P9 1069 aa20.25■□□□□ 0.83
CCNF-203ENST00000564236 RPTORQ8N122 1335 aa20.25■□□□□ 0.83
CCNF-203ENST00000564236 APBB1O00213 710 aa20.24■□□□□ 0.83
CCNF-203ENST00000564236 POLR3DP05423 398 aaPredicted RBP20.24■□□□□ 0.83
CCNF-203ENST00000564236 Q3C1V9 767 aa20.24■□□□□ 0.83
CCNF-203ENST00000564236 C20orf194Q5TEA3 1177 aa20.24■□□□□ 0.83
CCNF-203ENST00000564236 CATSPERGQ6ZRH7 1159 aa20.24■□□□□ 0.83
CCNF-203ENST00000564236 TRMT44Q8IYL2 757 aaKnown RBP20.24■□□□□ 0.83
CCNF-203ENST00000564236 ANKLE1Q8NAG6 615 aa20.24■□□□□ 0.83
CCNF-203ENST00000564236 EDC3Q96F86 508 aaKnown RBP20.24■□□□□ 0.83
CCNF-203ENST00000564236 NUDT12Q9BQG2 462 aa20.24■□□□□ 0.83
CCNF-203ENST00000564236 ATP8A2Q9NTI2 1148 aa20.24■□□□□ 0.83
CCNF-203ENST00000564236 MCM9Q9NXL9 1143 aa20.24■□□□□ 0.83
CCNF-203ENST00000564236 PLXNB2O15031 1838 aa20.24■□□□□ 0.83
CCNF-203ENST00000564236 CNMDO75829 334 aa20.23■□□□□ 0.83
CCNF-203ENST00000564236 VCAM1P19320 739 aa20.23■□□□□ 0.83
CCNF-203ENST00000564236 RAB3GAP1Q15042 981 aa20.23■□□□□ 0.83
CCNF-203ENST00000564236 UBE3CQ15386 1083 aa20.23■□□□□ 0.83
CCNF-203ENST00000564236 MORN1Q5T089 497 aa20.23■□□□□ 0.83
CCNF-203ENST00000564236 ACER1Q8TDN7 264 aa20.23■□□□□ 0.83
CCNF-203ENST00000564236 SDR42E1Q8WUS8 393 aa20.23■□□□□ 0.83
CCNF-203ENST00000564236 TRIB2Q92519 343 aa20.23■□□□□ 0.83
CCNF-203ENST00000564236 FEZ1Q99689 392 aa20.23■□□□□ 0.83
CCNF-203ENST00000564236 LRRCC1Q9C099 1032 aa20.23■□□□□ 0.83
CCNF-203ENST00000564236 DDX24Q9GZR7 859 aaKnown RBP eCLIP20.23■□□□□ 0.835e-9■■■■■ 28.9
CCNF-203ENST00000564236 PORCNQ9H237 461 aa20.23■□□□□ 0.83
CCNF-203ENST00000564236 BOLA2Q9H3K6 86 aa20.23■□□□□ 0.83
CCNF-203ENST00000564236 SWAP70Q9UH65 585 aa20.23■□□□□ 0.83
CCNF-203ENST00000564236 COLQQ9Y215 455 aaPredicted RBP20.23■□□□□ 0.83
CCNF-203ENST00000564236 NAV1Q8NEY1 1877 aa20.22■□□□□ 0.83
CCNF-203ENST00000564236 PEX10O60683 326 aa20.22■□□□□ 0.83
CCNF-203ENST00000564236 GPR142Q7Z601 462 aa20.22■□□□□ 0.83
CCNF-203ENST00000564236 DOCK3Q8IZD9 2030 aa20.22■□□□□ 0.83
CCNF-203ENST00000564236 TFRCP02786 760 aaKnown RBP20.21■□□□□ 0.83
CCNF-203ENST00000564236 EVX2Q03828 476 aa20.21■□□□□ 0.83
CCNF-203ENST00000564236 DPF3Q92784 378 aa20.21■□□□□ 0.83
CCNF-203ENST00000564236 PRO3102Q9H379 93 aa20.21■□□□□ 0.83
CCNF-203ENST00000564236 HMX1Q9NP08 348 aaPredicted RBP20.21■□□□□ 0.83
CCNF-203ENST00000564236 FXR1P51114 621 aaKnown RBP eCLIP20.2■□□□□ 0.82
CCNF-203ENST00000564236 TRIM32Q13049 653 aa20.2■□□□□ 0.82
CCNF-203ENST00000564236 SEPT2Q15019 361 aa20.2■□□□□ 0.82
CCNF-203ENST00000564236 TMEM179Q6ZVK1 233 aa20.2■□□□□ 0.82
CCNF-203ENST00000564236 PLEKHH3Q7Z736 793 aa20.2■□□□□ 0.82
CCNF-203ENST00000564236 ARMT1Q9H993 441 aa20.2■□□□□ 0.82
CCNF-203ENST00000564236 RANBP2P49792 3224 aaKnown RBP20.2■□□□□ 0.82
CCNF-203ENST00000564236 A0A1W2PRG0 241 aa20.19■□□□□ 0.82
CCNF-203ENST00000564236 MBD4O95243 580 aa20.19■□□□□ 0.82
CCNF-203ENST00000564236 CYP2B6P20813 491 aa20.19■□□□□ 0.82
CCNF-203ENST00000564236 RGS2P41220 211 aa20.19■□□□□ 0.82
CCNF-203ENST00000564236 CCNA1P78396 465 aa20.19■□□□□ 0.82
CCNF-203ENST00000564236 ZYXQ15942 572 aaKnown RBP20.19■□□□□ 0.82
CCNF-203ENST00000564236 APBA2Q99767 749 aa20.19■□□□□ 0.82
CCNF-203ENST00000564236 PAGR1Q9BTK6 254 aa20.19■□□□□ 0.82
CCNF-203ENST00000564236 OGDHLQ9ULD0 1010 aa20.19■□□□□ 0.82
CCNF-203ENST00000564236 NR2E3Q9Y5X4 410 aa20.19■□□□□ 0.82
CCNF-203ENST00000564236 SPDYE16A6NNV3 312 aaPredicted RBP20.18■□□□□ 0.82
CCNF-203ENST00000564236 MNX1P50219 401 aaPredicted RBP20.18■□□□□ 0.82
CCNF-203ENST00000564236 C12orf60Q5U649 245 aa20.18■□□□□ 0.82
CCNF-203ENST00000564236 ZSCAN25Q6NSZ9 544 aa20.18■□□□□ 0.82
CCNF-203ENST00000564236 RPAP3Q9H6T3 665 aaPredicted RBP20.18■□□□□ 0.82
CCNF-203ENST00000564236 DCTPP1Q9H773 170 aa20.18■□□□□ 0.82
CCNF-203ENST00000564236 PRKAB2O43741 272 aa20.17■□□□□ 0.82
CCNF-203ENST00000564236 HOXC6P09630 235 aa20.17■□□□□ 0.82
CCNF-203ENST00000564236 CYP2D6P10635 497 aa20.17■□□□□ 0.82
CCNF-203ENST00000564236 PRKAR2AP13861 404 aaKnown RBP20.17■□□□□ 0.82
CCNF-203ENST00000564236 SLFNL1Q499Z3 407 aa20.17■□□□□ 0.82
CCNF-203ENST00000564236 NECAB2Q7Z6G3 386 aa20.17■□□□□ 0.82
CCNF-203ENST00000564236 SIAH1Q8IUQ4 282 aa20.17■□□□□ 0.82
CCNF-203ENST00000564236 SLC44A5Q8NCS7 719 aa20.17■□□□□ 0.82
CCNF-203ENST00000564236 LPAR1Q92633 364 aa20.17■□□□□ 0.82
CCNF-203ENST00000564236 CCDC17Q96LX7 622 aa20.17■□□□□ 0.82
CCNF-203ENST00000564236 ECHDC1Q9NTX5 307 aa20.17■□□□□ 0.82
CCNF-203ENST00000564236 BTBD7Q9P203 1132 aa20.17■□□□□ 0.82
CCNF-203ENST00000564236 CEP290O15078 2479 aa20.16■□□□□ 0.82
CCNF-203ENST00000564236 SLC15A5A6NIM6 579 aa20.16■□□□□ 0.82
CCNF-203ENST00000564236 GLRX3O76003 335 aaKnown RBP20.16■□□□□ 0.82
CCNF-203ENST00000564236 IGHA2P01877 340 aa20.16■□□□□ 0.82
CCNF-203ENST00000564236 ZKSCAN1P17029 563 aaPredicted RBP20.16■□□□□ 0.82
CCNF-203ENST00000564236 MAP2K5Q13163 448 aa20.16■□□□□ 0.82
CCNF-203ENST00000564236 C16orf86Q6ZW13 317 aa20.16■□□□□ 0.82
CCNF-203ENST00000564236 PAWRQ96IZ0 340 aaKnown RBP20.16■□□□□ 0.82
CCNF-203ENST00000564236 TMX2Q9Y320 296 aa20.16■□□□□ 0.82
CCNF-203ENST00000564236 CHGBP05060 677 aa20.15■□□□□ 0.82
CCNF-203ENST00000564236 PTPREP23469 700 aa20.15■□□□□ 0.82
CCNF-203ENST00000564236 CACNB2Q08289 660 aaPredicted RBP20.15■□□□□ 0.82
CCNF-203ENST00000564236 GRB14Q14449 540 aa20.15■□□□□ 0.82
CCNF-203ENST00000564236 COG2Q14746 738 aa20.15■□□□□ 0.82
CCNF-203ENST00000564236 CHRDL2Q6WN34 429 aa20.15■□□□□ 0.82
CCNF-203ENST00000564236 CCAR1Q8IX12 1150 aaKnown RBP20.15■□□□□ 0.82
CCNF-203ENST00000564236 DYNLL2Q96FJ2 89 aa20.15■□□□□ 0.82
CCNF-203ENST00000564236 PUS7LQ9H0K6 701 aaKnown RBP20.15■□□□□ 0.82
CCNF-203ENST00000564236 HOXC10Q9NYD6 342 aa20.15■□□□□ 0.82
CCNF-203ENST00000564236 USP17L12C9JPN9 530 aa20.14■□□□□ 0.81
CCNF-203ENST00000564236 USP17L21D6R901 530 aa20.14■□□□□ 0.81
CCNF-203ENST00000564236 MPHOSPH10O00566 681 aaKnown RBP20.14■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms