RNA–Protein interactions for RNA: ENST00000563720.1

MAP1LC3B-204, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 3

Gene MAP1LC3B, Length 287 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-204ENST00000563720 ANKLE1Q8NAG6 615 aa21.04■□□□□ 0.96
MAP1LC3B-204ENST00000563720 SDR42E1Q8WUS8 393 aa21.04■□□□□ 0.96
MAP1LC3B-204ENST00000563720 GDF15Q99988 308 aa21.04■□□□□ 0.96
MAP1LC3B-204ENST00000563720 DDX24Q9GZR7 859 aaKnown RBP eCLIP21.04■□□□□ 0.96
MAP1LC3B-204ENST00000563720 ARMT1Q9H993 441 aa21.04■□□□□ 0.96
MAP1LC3B-204ENST00000563720 ZMYND8Q9ULU4 1186 aaPredicted RBP21.04■□□□□ 0.96
MAP1LC3B-204ENST00000563720 HMGCRP04035 888 aa21.03■□□□□ 0.96
MAP1LC3B-204ENST00000563720 BMP8BP34820 402 aa21.03■□□□□ 0.96
MAP1LC3B-204ENST00000563720 SHMT1P34896 483 aa21.03■□□□□ 0.96
MAP1LC3B-204ENST00000563720 EVX2Q03828 476 aa21.03■□□□□ 0.96
MAP1LC3B-204ENST00000563720 PABPC4Q13310 644 aaKnown RBP eCLIP21.03■□□□□ 0.96
MAP1LC3B-204ENST00000563720 UBE3CQ15386 1083 aa21.03■□□□□ 0.96
MAP1LC3B-204ENST00000563720 DCP1AQ9NPI6 582 aaPredicted RBP21.03■□□□□ 0.96
MAP1LC3B-204ENST00000563720 MCM9Q9NXL9 1143 aa21.03■□□□□ 0.96
MAP1LC3B-204ENST00000563720 C19orf81C9J6K1 198 aa21.02■□□□□ 0.96
MAP1LC3B-204ENST00000563720 USP17L10C9JJH3 530 aa21.02■□□□□ 0.96
MAP1LC3B-204ENST00000563720 MBD4O95243 580 aa21.02■□□□□ 0.96
MAP1LC3B-204ENST00000563720 POLR3DP05423 398 aaPredicted RBP21.02■□□□□ 0.96
MAP1LC3B-204ENST00000563720 GABPAQ06546 454 aa21.02■□□□□ 0.96
MAP1LC3B-204ENST00000563720 ASCC2Q9H1I8 757 aaPredicted RBP21.02■□□□□ 0.96
MAP1LC3B-204ENST00000563720 PLXNB2O15031 1838 aa21.01■□□□□ 0.95
MAP1LC3B-204ENST00000563720 PRKAB2O43741 272 aa21.01■□□□□ 0.95
MAP1LC3B-204ENST00000563720 GCLCP48506 637 aaPredicted RBP21.01■□□□□ 0.95
MAP1LC3B-204ENST00000563720 CERKLQ49MI3 558 aaPredicted RBP21.01■□□□□ 0.95
MAP1LC3B-204ENST00000563720 GPR153Q6NV75 609 aa21.01■□□□□ 0.95
MAP1LC3B-204ENST00000563720 DEFB123Q8N688 67 aa21.01■□□□□ 0.95
MAP1LC3B-204ENST00000563720 CRBNQ96SW2 442 aa21.01■□□□□ 0.95
MAP1LC3B-204ENST00000563720 NBPF3Q9H094 633 aa21.01■□□□□ 0.95
MAP1LC3B-204ENST00000563720 HMX1Q9NP08 348 aaPredicted RBP21.01■□□□□ 0.95
MAP1LC3B-204ENST00000563720 TMOD4Q9NZQ9 345 aa21.01■□□□□ 0.95
MAP1LC3B-204ENST00000563720 CYP2D6P10635 497 aa21■□□□□ 0.95
MAP1LC3B-204ENST00000563720 HOXA7P31268 230 aaPredicted RBP21■□□□□ 0.95
MAP1LC3B-204ENST00000563720 MNX1P50219 401 aaPredicted RBP21■□□□□ 0.95
MAP1LC3B-204ENST00000563720 ABCB5Q2M3G0 1257 aa21■□□□□ 0.95
MAP1LC3B-204ENST00000563720 TSHZ3Q63HK5 1081 aa21■□□□□ 0.95
MAP1LC3B-204ENST00000563720 EMILIN3Q9NT22 766 aa21■□□□□ 0.95
MAP1LC3B-204ENST00000563720 RPTORQ8N122 1335 aa21■□□□□ 0.95
MAP1LC3B-204ENST00000563720 SYN1P17600 705 aa20.99■□□□□ 0.95
MAP1LC3B-204ENST00000563720 ZSCAN25Q6NSZ9 544 aa20.99■□□□□ 0.95
MAP1LC3B-204ENST00000563720 GPATCH3Q96I76 525 aa20.99■□□□□ 0.95
MAP1LC3B-204ENST00000563720 C11orf49Q9H6J7 331 aa20.99■□□□□ 0.95
MAP1LC3B-204ENST00000563720 ALPK3Q96L96 1907 aa20.98■□□□□ 0.95
MAP1LC3B-204ENST00000563720 GUCY1A2P33402 732 aa20.98■□□□□ 0.95
MAP1LC3B-204ENST00000563720 TRIM32Q13049 653 aa20.98■□□□□ 0.95
MAP1LC3B-204ENST00000563720 RAB3GAP1Q15042 981 aa20.98■□□□□ 0.95
MAP1LC3B-204ENST00000563720 USP17L2Q6R6M4 530 aa20.98■□□□□ 0.95
MAP1LC3B-204ENST00000563720 PUS7LQ9H0K6 701 aaKnown RBP20.98■□□□□ 0.95
MAP1LC3B-204ENST00000563720 ATP8A2Q9NTI2 1148 aa20.98■□□□□ 0.95
MAP1LC3B-204ENST00000563720 COL6A3P12111 3177 aa20.97■□□□□ 0.95
MAP1LC3B-204ENST00000563720 IRX3P78415 501 aaPredicted RBP20.97■□□□□ 0.95
MAP1LC3B-204ENST00000563720 Q7L0L9 218 aa20.97■□□□□ 0.95
MAP1LC3B-204ENST00000563720 KBTBD3Q8NAB2 608 aa20.97■□□□□ 0.95
MAP1LC3B-204ENST00000563720 SLC44A5Q8NCS7 719 aa20.97■□□□□ 0.95
MAP1LC3B-204ENST00000563720 C12orf42Q96LP6 360 aa20.97■□□□□ 0.95
MAP1LC3B-204ENST00000563720 P2RX7Q99572 595 aaKnown RBP20.97■□□□□ 0.95
MAP1LC3B-204ENST00000563720 CABP5Q9NP86 173 aa20.97■□□□□ 0.95
MAP1LC3B-204ENST00000563720 GJD2Q9UKL4 321 aa20.97■□□□□ 0.95
MAP1LC3B-204ENST00000563720 MAGEA10P43363 369 aaPredicted RBP20.96■□□□□ 0.95
MAP1LC3B-204ENST00000563720 LRIT3Q3SXY7 679 aa20.96■□□□□ 0.95
MAP1LC3B-204ENST00000563720 TDHQ8IZJ6 230 aa20.96■□□□□ 0.95
MAP1LC3B-204ENST00000563720 ACER1Q8TDN7 264 aa20.96■□□□□ 0.95
MAP1LC3B-204ENST00000563720 OTUD7AQ8TE49 926 aaPredicted RBP20.96■□□□□ 0.95
MAP1LC3B-204ENST00000563720 FEZ1Q99689 392 aa20.96■□□□□ 0.95
MAP1LC3B-204ENST00000563720 MORF4L1Q9UBU8 362 aa20.96■□□□□ 0.95
MAP1LC3B-204ENST00000563720 TTC41PQ6P2S7 1318 aa20.96■□□□□ 0.95
MAP1LC3B-204ENST00000563720 PARP14Q460N5 1801 aa20.95■□□□□ 0.94
MAP1LC3B-204ENST00000563720 SMIM22K7EJ46 135 aa20.95■□□□□ 0.94
MAP1LC3B-204ENST00000563720 HERVK_113P62684 666 aa20.95■□□□□ 0.94
MAP1LC3B-204ENST00000563720 SEPT2Q15019 361 aa20.95■□□□□ 0.94
MAP1LC3B-204ENST00000563720 DYNLL2Q96FJ2 89 aa20.95■□□□□ 0.94
MAP1LC3B-204ENST00000563720 KIAA1683Q9H0B3 1180 aa20.95■□□□□ 0.94
MAP1LC3B-204ENST00000563720 SWAP70Q9UH65 585 aa20.95■□□□□ 0.94
MAP1LC3B-204ENST00000563720 STXBP5LQ9Y2K9 1186 aa20.95■□□□□ 0.94
MAP1LC3B-204ENST00000563720 SLC4A4Q9Y6R1 1079 aa20.95■□□□□ 0.94
MAP1LC3B-204ENST00000563720 RLFQ13129 1914 aa20.95■□□□□ 0.94
MAP1LC3B-204ENST00000563720 LAMA3Q16787 3333 aa20.94■□□□□ 0.94
MAP1LC3B-204ENST00000563720 GREB1LQ9C091 1923 aaPredicted RBP20.94■□□□□ 0.94
MAP1LC3B-204ENST00000563720 CYP2D7A0A087X1C5 515 aa20.94■□□□□ 0.94
MAP1LC3B-204ENST00000563720 PEX10O60683 326 aa20.94■□□□□ 0.94
MAP1LC3B-204ENST00000563720 CYP2B6P20813 491 aa20.94■□□□□ 0.94
MAP1LC3B-204ENST00000563720 ZYXQ15942 572 aaKnown RBP20.94■□□□□ 0.94
MAP1LC3B-204ENST00000563720 C12orf60Q5U649 245 aa20.94■□□□□ 0.94
MAP1LC3B-204ENST00000563720 PI4K2BQ8TCG2 481 aa20.94■□□□□ 0.94
MAP1LC3B-204ENST00000563720 TRIB2Q92519 343 aa20.94■□□□□ 0.94
MAP1LC3B-204ENST00000563720 UBE2OQ9C0C9 1292 aaKnown RBP20.94■□□□□ 0.94
MAP1LC3B-204ENST00000563720 TXNRD2Q9NNW7 524 aa20.94■□□□□ 0.94
MAP1LC3B-204ENST00000563720 OGDHLQ9ULD0 1010 aa20.94■□□□□ 0.94
MAP1LC3B-204ENST00000563720 USP17L12C9JPN9 530 aa20.93■□□□□ 0.94
MAP1LC3B-204ENST00000563720 USP17L21D6R901 530 aa20.93■□□□□ 0.94
MAP1LC3B-204ENST00000563720 USP14P54578 494 aa20.93■□□□□ 0.94
MAP1LC3B-204ENST00000563720 POTEEQ6S8J3 1075 aa20.93■□□□□ 0.94
MAP1LC3B-204ENST00000563720 STRBPQ96SI9 672 aaKnown RBP20.93■□□□□ 0.94
MAP1LC3B-204ENST00000563720 MPHOSPH10O00566 681 aaKnown RBP20.92■□□□□ 0.94
MAP1LC3B-204ENST00000563720 RNF113AO15541 343 aaKnown RBP20.92■□□□□ 0.94
MAP1LC3B-204ENST00000563720 PRKAR2AP13861 404 aaKnown RBP20.92■□□□□ 0.94
MAP1LC3B-204ENST00000563720 APPBP2Q92624 585 aa20.92■□□□□ 0.94
MAP1LC3B-204ENST00000563720 OSBP2Q969R2 916 aa20.92■□□□□ 0.94
MAP1LC3B-204ENST00000563720 NUDT12Q9BQG2 462 aa20.92■□□□□ 0.94
MAP1LC3B-204ENST00000563720 MTMR10Q9NXD2 777 aa20.92■□□□□ 0.94
MAP1LC3B-204ENST00000563720 RBPJLQ9UBG7 517 aa20.92■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms