RNA–Protein interactions for RNA: ENST00000562829.1

TNRC6A-209, Transcript of trinucleotide repeat containing 6A, humanhuman

TSL 2

Gene TNRC6A, Length 277 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC6A-209ENST00000562829 CWC22Q9HCG8 908 aaKnown RBP20.25■□□□□ 0.83
TNRC6A-209ENST00000562829 MYH8P13535 1937 aa20.24■□□□□ 0.83
TNRC6A-209ENST00000562829 USP17L15C9J2P7 530 aa20.24■□□□□ 0.83
TNRC6A-209ENST00000562829 USP17L13C9JLJ4 530 aa20.24■□□□□ 0.83
TNRC6A-209ENST00000562829 USP17L11C9JVI0 530 aa20.24■□□□□ 0.83
TNRC6A-209ENST00000562829 USP17L18D6R9N7 530 aa20.24■□□□□ 0.83
TNRC6A-209ENST00000562829 USP17L22D6RA61 530 aa20.24■□□□□ 0.83
TNRC6A-209ENST00000562829 USP17L17D6RBQ6 530 aa20.24■□□□□ 0.83
TNRC6A-209ENST00000562829 USP17L19D6RCP7 530 aa20.24■□□□□ 0.83
TNRC6A-209ENST00000562829 USP17L20D6RJB6 530 aa20.24■□□□□ 0.83
TNRC6A-209ENST00000562829 FARP2O94887 1054 aaPredicted RBP20.24■□□□□ 0.83
TNRC6A-209ENST00000562829 SGPL1O95470 568 aa20.24■□□□□ 0.83
TNRC6A-209ENST00000562829 HMGCRP04035 888 aa20.24■□□□□ 0.83
TNRC6A-209ENST00000562829 CYP2B6P20813 491 aa20.24■□□□□ 0.83
TNRC6A-209ENST00000562829 ERVK-9P63128 1117 aa20.24■□□□□ 0.83
TNRC6A-209ENST00000562829 ERVK-24P63145 666 aa20.24■□□□□ 0.83
TNRC6A-209ENST00000562829 USP17L24Q0WX57 530 aa20.24■□□□□ 0.83
TNRC6A-209ENST00000562829 SEPT2Q15019 361 aa20.24■□□□□ 0.83
TNRC6A-209ENST00000562829 ZSCAN25Q6NSZ9 544 aa20.24■□□□□ 0.83
TNRC6A-209ENST00000562829 AMOTL1Q8IY63 956 aa20.24■□□□□ 0.83
TNRC6A-209ENST00000562829 DPF3Q92784 378 aa20.24■□□□□ 0.83
TNRC6A-209ENST00000562829 DDRGK1Q96HY6 314 aa20.24■□□□□ 0.83
TNRC6A-209ENST00000562829 ATP8A2Q9NTI2 1148 aa20.24■□□□□ 0.83
TNRC6A-209ENST00000562829 RBPJLQ9UBG7 517 aa20.24■□□□□ 0.83
TNRC6A-209ENST00000562829 GJD2Q9UKL4 321 aa20.24■□□□□ 0.83
TNRC6A-209ENST00000562829 BAZ2AQ9UIF9 1905 aaKnown RBP20.23■□□□□ 0.83
TNRC6A-209ENST00000562829 TFRCP02786 760 aaKnown RBP20.23■□□□□ 0.83
TNRC6A-209ENST00000562829 CHGBP05060 677 aa20.23■□□□□ 0.83
TNRC6A-209ENST00000562829 VCAM1P19320 739 aa20.23■□□□□ 0.83
TNRC6A-209ENST00000562829 MAPK4P31152 587 aa20.23■□□□□ 0.83
TNRC6A-209ENST00000562829 SLC44A5Q8NCS7 719 aa20.23■□□□□ 0.83
TNRC6A-209ENST00000562829 SOCS4Q8WXH5 440 aa20.23■□□□□ 0.83
TNRC6A-209ENST00000562829 DYNLL2Q96FJ2 89 aa20.23■□□□□ 0.83
TNRC6A-209ENST00000562829 GPATCH3Q96I76 525 aa20.23■□□□□ 0.83
TNRC6A-209ENST00000562829 NUDT12Q9BQG2 462 aa20.23■□□□□ 0.83
TNRC6A-209ENST00000562829 ECHDC1Q9NTX5 307 aa20.23■□□□□ 0.83
TNRC6A-209ENST00000562829 SWAP70Q9UH65 585 aa20.23■□□□□ 0.83
TNRC6A-209ENST00000562829 GUCY1A2P33402 732 aa20.22■□□□□ 0.83
TNRC6A-209ENST00000562829 UBE3CQ15386 1083 aa20.22■□□□□ 0.83
TNRC6A-209ENST00000562829 Q3C1V9 767 aa20.22■□□□□ 0.83
TNRC6A-209ENST00000562829 HTATIP2Q9BUP3 242 aa20.22■□□□□ 0.83
TNRC6A-209ENST00000562829 XRN2Q9H0D6 950 aaKnown RBP eCLIP20.22■□□□□ 0.831e-37■■■■□ 21.6
TNRC6A-209ENST00000562829 PORCNQ9H237 461 aa20.22■□□□□ 0.83
TNRC6A-209ENST00000562829 PLXNB2O15031 1838 aa20.22■□□□□ 0.83
TNRC6A-209ENST00000562829 CATSPERGQ6ZRH7 1159 aa20.21■□□□□ 0.83
TNRC6A-209ENST00000562829 RPAP3Q9H6T3 665 aaPredicted RBP20.21■□□□□ 0.83
TNRC6A-209ENST00000562829 DCTPP1Q9H773 170 aa20.21■□□□□ 0.83
TNRC6A-209ENST00000562829 PAK6Q9NQU5 681 aaPredicted RBP20.21■□□□□ 0.83
TNRC6A-209ENST00000562829 SLC4A4Q9Y6R1 1079 aa20.21■□□□□ 0.83
TNRC6A-209ENST00000562829 H0YGN5 161 aa20.2■□□□□ 0.82
TNRC6A-209ENST00000562829 CCNA1P78396 465 aa20.2■□□□□ 0.82
TNRC6A-209ENST00000562829 TRIM32Q13049 653 aa20.2■□□□□ 0.82
TNRC6A-209ENST00000562829 WDR78Q5VTH9 848 aa20.2■□□□□ 0.82
TNRC6A-209ENST00000562829 TSHZ3Q63HK5 1081 aa20.2■□□□□ 0.82
TNRC6A-209ENST00000562829 TMEM179Q6ZVK1 233 aa20.2■□□□□ 0.82
TNRC6A-209ENST00000562829 GPR142Q7Z601 462 aa20.2■□□□□ 0.82
TNRC6A-209ENST00000562829 TRIB2Q92519 343 aa20.2■□□□□ 0.82
TNRC6A-209ENST00000562829 HMX1Q9NP08 348 aaPredicted RBP20.2■□□□□ 0.82
TNRC6A-209ENST00000562829 RABGAP1Q9Y3P9 1069 aa20.2■□□□□ 0.82
TNRC6A-209ENST00000562829 CYP2D7A0A087X1C5 515 aa20.19■□□□□ 0.82
TNRC6A-209ENST00000562829 USP17L12C9JPN9 530 aa20.19■□□□□ 0.82
TNRC6A-209ENST00000562829 USP17L21D6R901 530 aa20.19■□□□□ 0.82
TNRC6A-209ENST00000562829 HABP4Q5JVS0 413 aaKnown RBP20.19■□□□□ 0.82
TNRC6A-209ENST00000562829 PLEKHH3Q7Z736 793 aa20.19■□□□□ 0.82
TNRC6A-209ENST00000562829 UBE2Q1Q7Z7E8 422 aa20.19■□□□□ 0.82
TNRC6A-209ENST00000562829 PUS7LQ9H0K6 701 aaKnown RBP20.19■□□□□ 0.82
TNRC6A-209ENST00000562829 RPTORQ8N122 1335 aa20.19■□□□□ 0.82
TNRC6A-209ENST00000562829 A0A1W2PRG0 241 aa20.18■□□□□ 0.82
TNRC6A-209ENST00000562829 AKR1B1P15121 316 aa20.18■□□□□ 0.82
TNRC6A-209ENST00000562829 ZKSCAN1P17029 563 aaPredicted RBP20.18■□□□□ 0.82
TNRC6A-209ENST00000562829 C12orf60Q5U649 245 aa20.18■□□□□ 0.82
TNRC6A-209ENST00000562829 POTEEQ6S8J3 1075 aa20.18■□□□□ 0.82
TNRC6A-209ENST00000562829 CLEC10AQ8IUN9 316 aa20.18■□□□□ 0.82
TNRC6A-209ENST00000562829 TANGO6Q9C0B7 1094 aa20.18■□□□□ 0.82
TNRC6A-209ENST00000562829 CNMDO75829 334 aa20.17■□□□□ 0.82
TNRC6A-209ENST00000562829 GLRX3O76003 335 aaKnown RBP20.17■□□□□ 0.82
TNRC6A-209ENST00000562829 XRCC5P13010 732 aaKnown RBP20.17■□□□□ 0.82
TNRC6A-209ENST00000562829 CAPN2P17655 700 aa20.17■□□□□ 0.82
TNRC6A-209ENST00000562829 RGS2P41220 211 aa20.17■□□□□ 0.82
TNRC6A-209ENST00000562829 CDK8P49336 464 aa20.17■□□□□ 0.82
TNRC6A-209ENST00000562829 ICA1Q05084 483 aa20.17■□□□□ 0.82
TNRC6A-209ENST00000562829 KBTBD3Q8NAB2 608 aa20.17■□□□□ 0.82
TNRC6A-209ENST00000562829 ARHGEF10LQ9HCE6 1279 aa20.17■□□□□ 0.82
TNRC6A-209ENST00000562829 SPDYE16A6NNV3 312 aaPredicted RBP20.16■□□□□ 0.82
TNRC6A-209ENST00000562829 SMIM22K7EJ46 135 aa20.16■□□□□ 0.82
TNRC6A-209ENST00000562829 PRKAR2AP13861 404 aaKnown RBP20.16■□□□□ 0.82
TNRC6A-209ENST00000562829 TRMT44Q8IYL2 757 aaKnown RBP20.16■□□□□ 0.82
TNRC6A-209ENST00000562829 CCDC17Q96LX7 622 aa20.16■□□□□ 0.82
TNRC6A-209ENST00000562829 APBA2Q99767 749 aa20.16■□□□□ 0.82
TNRC6A-209ENST00000562829 CRISPLD2Q9H0B8 497 aa20.16■□□□□ 0.82
TNRC6A-209ENST00000562829 SH2D4AQ9H788 454 aa20.16■□□□□ 0.82
TNRC6A-209ENST00000562829 RRP1P56182 461 aaKnown RBP20.15■□□□□ 0.82
TNRC6A-209ENST00000562829 ATP2B2Q01814 1243 aa20.15■□□□□ 0.82
TNRC6A-209ENST00000562829 MORN1Q5T089 497 aa20.15■□□□□ 0.82
TNRC6A-209ENST00000562829 LBX2Q6XYB7 198 aa20.15■□□□□ 0.82
TNRC6A-209ENST00000562829 C16orf86Q6ZW13 317 aa20.15■□□□□ 0.82
TNRC6A-209ENST00000562829 BTBD7Q9P203 1132 aa20.15■□□□□ 0.82
TNRC6A-209ENST00000562829 ARPP21Q9UBL0 812 aaPredicted RBP20.15■□□□□ 0.82
TNRC6A-209ENST00000562829 COLQQ9Y215 455 aaPredicted RBP20.15■□□□□ 0.82
TNRC6A-209ENST00000562829 PCDHB15Q9Y5E8 787 aa20.15■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms