RNA–Protein interactions for RNA: ENST00000562747.1

CDT1-202, Transcript of chromatin licensing and DNA replication factor 1, humanhuman

TSL 2

Gene CDT1, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1-202ENST00000562747 STRBPQ96SI9 672 aaKnown RBP19.88■□□□□ 0.77
CDT1-202ENST00000562747 HTATIP2Q9BUP3 242 aa19.88■□□□□ 0.77
CDT1-202ENST00000562747 TBC1D2Q9BYX2 928 aa19.88■□□□□ 0.77
CDT1-202ENST00000562747 GINM1Q9NU53 330 aa19.88■□□□□ 0.77
CDT1-202ENST00000562747 TAOK2Q9UL54 1235 aa19.88■□□□□ 0.77
CDT1-202ENST00000562747 AGTPBP1Q9UPW5 1226 aa19.88■□□□□ 0.77
CDT1-202ENST00000562747 SLC4A4Q9Y6R1 1079 aa19.88■□□□□ 0.77
CDT1-202ENST00000562747 SGPL1O95470 568 aa19.87■□□□□ 0.77
CDT1-202ENST00000562747 PLCD1P51178 756 aa19.87■□□□□ 0.77
CDT1-202ENST00000562747 RRP1BQ14684 758 aaKnown RBP19.87■□□□□ 0.77
CDT1-202ENST00000562747 TATDN1Q6P1N9 297 aa19.87■□□□□ 0.77
CDT1-202ENST00000562747 ANKRD13CQ8N6S4 541 aa19.87■□□□□ 0.77
CDT1-202ENST00000562747 PLXNB2O15031 1838 aa19.87■□□□□ 0.77
CDT1-202ENST00000562747 GPAA1O43292 621 aa19.86■□□□□ 0.77
CDT1-202ENST00000562747 ASNSP08243 561 aa19.86■□□□□ 0.77
CDT1-202ENST00000562747 GNAT2P19087 354 aa19.86■□□□□ 0.77
CDT1-202ENST00000562747 IRF5Q13568 498 aa19.86■□□□□ 0.77
CDT1-202ENST00000562747 ZMYM1Q5SVZ6 1142 aa19.86■□□□□ 0.77
CDT1-202ENST00000562747 AMOTL1Q8IY63 956 aa19.86■□□□□ 0.77
CDT1-202ENST00000562747 PXYLP1Q8TE99 480 aa19.86■□□□□ 0.77
CDT1-202ENST00000562747 M0R2C6 588 aa19.85■□□□□ 0.77
CDT1-202ENST00000562747 GABPAQ06546 454 aa19.85■□□□□ 0.77
CDT1-202ENST00000562747 GIMAP6Q6P9H5 292 aa19.85■□□□□ 0.77
CDT1-202ENST00000562747 DEFB118Q96PH6 123 aa19.85■□□□□ 0.77
CDT1-202ENST00000562747 PAK6Q9NQU5 681 aaPredicted RBP19.85■□□□□ 0.77
CDT1-202ENST00000562747 USP17L5A8MUK1 530 aa19.84■□□□□ 0.77
CDT1-202ENST00000562747 TRIM6-TRIM34B2RNG4 842 aa19.84■□□□□ 0.77
CDT1-202ENST00000562747 AS3MTQ9HBK9 375 aa19.84■□□□□ 0.77
CDT1-202ENST00000562747 BAZ2AQ9UIF9 1905 aaKnown RBP19.84■□□□□ 0.77
CDT1-202ENST00000562747 GSG1L2A8MUP6 293 aa19.83■□□□□ 0.77
CDT1-202ENST00000562747 SPP2Q13103 211 aa19.83■□□□□ 0.77
CDT1-202ENST00000562747 FAM110CQ1W6H9 321 aa19.83■□□□□ 0.77
CDT1-202ENST00000562747 C12orf60Q5U649 245 aa19.83■□□□□ 0.77
CDT1-202ENST00000562747 PROCA1Q8NCQ7 364 aaPredicted RBP19.83■□□□□ 0.77
CDT1-202ENST00000562747 ZNF280CQ8ND82 737 aa19.83■□□□□ 0.77
CDT1-202ENST00000562747 SEC62Q99442 399 aaKnown RBP19.83■□□□□ 0.77
CDT1-202ENST00000562747 ARPP21Q9UBL0 812 aaPredicted RBP19.83■□□□□ 0.77
CDT1-202ENST00000562747 SWAP70Q9UH65 585 aa19.83■□□□□ 0.77
CDT1-202ENST00000562747 ZBTB21Q9ULJ3 1066 aa19.83■□□□□ 0.77
CDT1-202ENST00000562747 USP17L12C9JPN9 530 aa19.82■□□□□ 0.76
CDT1-202ENST00000562747 USP17L21D6R901 530 aa19.82■□□□□ 0.76
CDT1-202ENST00000562747 GDF11O95390 407 aa19.82■□□□□ 0.76
CDT1-202ENST00000562747 CYP2D6P10635 497 aa19.82■□□□□ 0.76
CDT1-202ENST00000562747 PDE4AP27815 886 aa19.82■□□□□ 0.76
CDT1-202ENST00000562747 SHMT1P34896 483 aa19.82■□□□□ 0.76
CDT1-202ENST00000562747 HMGCS2P54868 508 aa19.82■□□□□ 0.76
CDT1-202ENST00000562747 CERKLQ49MI3 558 aaPredicted RBP19.82■□□□□ 0.76
CDT1-202ENST00000562747 DIS3LQ8TF46 1054 aaKnown RBP19.82■□□□□ 0.76
CDT1-202ENST00000562747 RILPL2Q969X0 211 aa19.82■□□□□ 0.76
CDT1-202ENST00000562747 WDR18Q9BV38 432 aa19.82■□□□□ 0.76
CDT1-202ENST00000562747 CRISPLD2Q9H0B8 497 aa19.82■□□□□ 0.76
CDT1-202ENST00000562747 NR2E3Q9Y5X4 410 aa19.82■□□□□ 0.76
CDT1-202ENST00000562747 PATL2C9JE40 543 aaKnown RBP19.81■□□□□ 0.76
CDT1-202ENST00000562747 TFRCP02786 760 aaKnown RBP19.81■□□□□ 0.76
CDT1-202ENST00000562747 JAG1P78504 1218 aa19.81■□□□□ 0.76
CDT1-202ENST00000562747 SBK1Q52WX2 424 aa19.81■□□□□ 0.76
CDT1-202ENST00000562747 CTR9Q6PD62 1173 aa19.81■□□□□ 0.76
CDT1-202ENST00000562747 COA7Q96BR5 231 aa19.81■□□□□ 0.76
CDT1-202ENST00000562747 HELLSQ9NRZ9 838 aa19.81■□□□□ 0.76
CDT1-202ENST00000562747 SOX1O00570 391 aaPredicted RBP19.8■□□□□ 0.76
CDT1-202ENST00000562747 GH2P01242 217 aa19.8■□□□□ 0.76
CDT1-202ENST00000562747 EVX2Q03828 476 aa19.8■□□□□ 0.76
CDT1-202ENST00000562747 TRIM32Q13049 653 aa19.8■□□□□ 0.76
CDT1-202ENST00000562747 ABCB5Q2M3G0 1257 aa19.8■□□□□ 0.76
CDT1-202ENST00000562747 PAWRQ96IZ0 340 aaKnown RBP19.8■□□□□ 0.76
CDT1-202ENST00000562747 XRN2Q9H0D6 950 aaKnown RBP eCLIP19.8■□□□□ 0.76
CDT1-202ENST00000562747 ASCC2Q9H1I8 757 aaPredicted RBP19.8■□□□□ 0.76
CDT1-202ENST00000562747 CABP5Q9NP86 173 aa19.8■□□□□ 0.76
CDT1-202ENST00000562747 PNMA3Q9UL41 463 aa19.8■□□□□ 0.76
CDT1-202ENST00000562747 CYP2D7A0A087X1C5 515 aa19.79■□□□□ 0.76
CDT1-202ENST00000562747 EVI5O60447 810 aa19.79■□□□□ 0.76
CDT1-202ENST00000562747 SHROOM1Q2M3G4 852 aaPredicted RBP19.79■□□□□ 0.76
CDT1-202ENST00000562747 DYNLL2Q96FJ2 89 aa19.79■□□□□ 0.76
CDT1-202ENST00000562747 NACAP1Q9BZK3 213 aa19.79■□□□□ 0.76
CDT1-202ENST00000562747 EPB41L4AQ9HCS5 686 aaPredicted RBP19.79■□□□□ 0.76
CDT1-202ENST00000562747 LAMA3Q16787 3333 aa19.78■□□□□ 0.76
CDT1-202ENST00000562747 PEX10O60683 326 aa19.78■□□□□ 0.76
CDT1-202ENST00000562747 APPP05067 770 aa19.78■□□□□ 0.76
CDT1-202ENST00000562747 CENPBP07199 599 aaPredicted RBP19.78■□□□□ 0.76
CDT1-202ENST00000562747 TDO2P48775 406 aa19.78■□□□□ 0.76
CDT1-202ENST00000562747 SH3D19Q5HYK7 790 aa19.78■□□□□ 0.76
CDT1-202ENST00000562747 C16orf86Q6ZW13 317 aa19.78■□□□□ 0.76
CDT1-202ENST00000562747 CENPQQ7L2Z9 268 aaPredicted RBP19.78■□□□□ 0.76
CDT1-202ENST00000562747 IFNL3Q8IZI9 196 aa19.78■□□□□ 0.76
CDT1-202ENST00000562747 GJD2Q9UKL4 321 aa19.78■□□□□ 0.76
CDT1-202ENST00000562747 MYH8P13535 1937 aa19.77■□□□□ 0.76
CDT1-202ENST00000562747 C19orf81C9J6K1 198 aa19.77■□□□□ 0.76
CDT1-202ENST00000562747 HMGCRP04035 888 aa19.77■□□□□ 0.76
CDT1-202ENST00000562747 NEFLP07196 543 aa19.77■□□□□ 0.76
CDT1-202ENST00000562747 SDSP20132 328 aa19.77■□□□□ 0.76
CDT1-202ENST00000562747 GCLCP48506 637 aaPredicted RBP19.77■□□□□ 0.76
CDT1-202ENST00000562747 CDK8P49336 464 aa19.77■□□□□ 0.76
CDT1-202ENST00000562747 BACE1P56817 501 aa19.77■□□□□ 0.76
CDT1-202ENST00000562747 MCMDC2Q4G0Z9 681 aa19.77■□□□□ 0.76
CDT1-202ENST00000562747 TTC22Q5TAA0 569 aa19.77■□□□□ 0.76
CDT1-202ENST00000562747 CCDC129Q6ZRS4 1044 aa19.77■□□□□ 0.76
CDT1-202ENST00000562747 SLC44A5Q8NCS7 719 aa19.77■□□□□ 0.76
CDT1-202ENST00000562747 CCDC17Q96LX7 622 aa19.77■□□□□ 0.76
CDT1-202ENST00000562747 FAM227BQ96M60 508 aa19.77■□□□□ 0.76
CDT1-202ENST00000562747 ROBO3Q96MS0 1386 aa19.77■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms