RNA–Protein interactions for RNA: ENST00000562310.1

COMMD4-205, Transcript of COMM domain containing 4, humanhuman

TSL 3

Gene COMMD4, Length 568 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-205ENST00000562310 CTCFLQ8NI51 663 aaPredicted RBP16.64■□□□□ 0.25
COMMD4-205ENST00000562310 NUP133Q8WUM0 1156 aa16.64■□□□□ 0.25
COMMD4-205ENST00000562310 WASF1Q92558 559 aa16.64■□□□□ 0.25
COMMD4-205ENST00000562310 CSRNP1Q96S65 589 aa16.64■□□□□ 0.25
COMMD4-205ENST00000562310 VEZTQ9HBM0 779 aa16.64■□□□□ 0.25
COMMD4-205ENST00000562310 ORC3Q9UBD5 711 aaPredicted RBP16.64■□□□□ 0.25
COMMD4-205ENST00000562310 CNOT7Q9UIV1 285 aaKnown RBP16.64■□□□□ 0.25
COMMD4-205ENST00000562310 MTMR6Q9Y217 621 aa16.64■□□□□ 0.25
COMMD4-205ENST00000562310 MYH4Q9Y623 1939 aa16.64■□□□□ 0.25
COMMD4-205ENST00000562310 MYH15Q9Y2K3 1946 aa16.63■□□□□ 0.25
COMMD4-205ENST00000562310 IGKV6D-41A0A0C4DH26 115 aa16.63■□□□□ 0.25
COMMD4-205ENST00000562310 H3BQV1 296 aa16.63■□□□□ 0.25
COMMD4-205ENST00000562310 F13A1P00488 732 aa16.63■□□□□ 0.25
COMMD4-205ENST00000562310 TOP1P11387 765 aaKnown RBP16.63■□□□□ 0.25
COMMD4-205ENST00000562310 RXRAP19793 462 aa16.63■□□□□ 0.25
COMMD4-205ENST00000562310 CDC27P30260 824 aa16.63■□□□□ 0.25
COMMD4-205ENST00000562310 NTRK3Q16288 839 aa16.63■□□□□ 0.25
COMMD4-205ENST00000562310 KIF4BQ2VIQ3 1234 aa16.63■□□□□ 0.25
COMMD4-205ENST00000562310 PNMA1Q8ND90 353 aa16.63■□□□□ 0.25
COMMD4-205ENST00000562310 FAM217BQ9NTX9 383 aaPredicted RBP16.63■□□□□ 0.25
COMMD4-205ENST00000562310 RNF181Q9P0P0 153 aa16.63■□□□□ 0.25
COMMD4-205ENST00000562310 ZC3H4Q9UPT8 1303 aaKnown RBP16.63■□□□□ 0.25
COMMD4-205ENST00000562310 FMNL1O95466 1100 aaPredicted RBP16.62■□□□□ 0.25
COMMD4-205ENST00000562310 AKR1B1P15121 316 aa16.62■□□□□ 0.25
COMMD4-205ENST00000562310 MCM4P33991 863 aa16.62■□□□□ 0.25
COMMD4-205ENST00000562310 ADD1P35611 737 aaKnown RBP16.62■□□□□ 0.25
COMMD4-205ENST00000562310 GNAQP50148 359 aa16.62■□□□□ 0.25
COMMD4-205ENST00000562310 SSRP1Q08945 709 aaKnown RBP16.62■□□□□ 0.25
COMMD4-205ENST00000562310 TATDN1Q6P1N9 297 aa16.62■□□□□ 0.25
COMMD4-205ENST00000562310 CCDC144CPQ8IYA2 1237 aa16.62■□□□□ 0.25
COMMD4-205ENST00000562310 CEP95Q96GE4 821 aa16.62■□□□□ 0.25
COMMD4-205ENST00000562310 DNAJC18Q9H819 358 aa16.62■□□□□ 0.25
COMMD4-205ENST00000562310 GPRC5DQ9NZD1 345 aa16.62■□□□□ 0.25
COMMD4-205ENST00000562310 STX8Q9UNK0 236 aa16.62■□□□□ 0.25
COMMD4-205ENST00000562310 TBC1D12O60347 775 aa16.61■□□□□ 0.25
COMMD4-205ENST00000562310 BAG4O95429 457 aaKnown RBP16.61■□□□□ 0.25
COMMD4-205ENST00000562310 FDPSP14324 419 aaKnown RBP16.61■□□□□ 0.25
COMMD4-205ENST00000562310 GRM4Q14833 912 aa16.61■□□□□ 0.25
COMMD4-205ENST00000562310 NBPF9Q3BBW0 867 aa16.61■□□□□ 0.25
COMMD4-205ENST00000562310 CERKLQ49MI3 558 aaPredicted RBP16.61■□□□□ 0.25
COMMD4-205ENST00000562310 TMEM47Q9BQJ4 181 aa16.61■□□□□ 0.25
COMMD4-205ENST00000562310 RNF26Q9BY78 433 aaPredicted RBP16.61■□□□□ 0.25
COMMD4-205ENST00000562310 MTMR4Q9NYA4 1195 aa16.61■□□□□ 0.25
COMMD4-205ENST00000562310 RBM27Q9P2N5 1060 aaKnown RBP16.61■□□□□ 0.25
COMMD4-205ENST00000562310 SHTN1A0MZ66 631 aa16.6■□□□□ 0.25
COMMD4-205ENST00000562310 GRIN3BO60391 1043 aa16.6■□□□□ 0.25
COMMD4-205ENST00000562310 DEXIO95424 95 aa16.6■□□□□ 0.25
COMMD4-205ENST00000562310 TTLL1O95922 423 aa16.6■□□□□ 0.25
COMMD4-205ENST00000562310 TMEM179Q6ZVK1 233 aa16.6■□□□□ 0.25
COMMD4-205ENST00000562310 TMTC3Q6ZXV5 915 aa16.6■□□□□ 0.25
COMMD4-205ENST00000562310 CDC37L1Q7L3B6 337 aa16.6■□□□□ 0.25
COMMD4-205ENST00000562310 APOBEC3FQ8IUX4 373 aaKnown RBP16.6■□□□□ 0.25
COMMD4-205ENST00000562310 C8orf76Q96K31 380 aa16.6■□□□□ 0.25
COMMD4-205ENST00000562310 LZTS2Q9BRK4 669 aa16.6■□□□□ 0.25
COMMD4-205ENST00000562310 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.6■□□□□ 0.25
COMMD4-205ENST00000562310 MPHOSPH10O00566 681 aaKnown RBP16.59■□□□□ 0.25
COMMD4-205ENST00000562310 LMOD1P29536 600 aaPredicted RBP16.59■□□□□ 0.25
COMMD4-205ENST00000562310 AKAP17AQ02040 695 aaKnown RBP16.59■□□□□ 0.25
COMMD4-205ENST00000562310 TBC1D10BQ4KMP7 808 aaPredicted RBP16.59■□□□□ 0.25
COMMD4-205ENST00000562310 FOXD4L5Q5VV16 416 aaPredicted RBP16.59■□□□□ 0.25
COMMD4-205ENST00000562310 C9orf131Q5VYM1 1079 aa16.59■□□□□ 0.25
COMMD4-205ENST00000562310 FOXD4L4Q8WXT5 416 aaPredicted RBP16.59■□□□□ 0.25
COMMD4-205ENST00000562310 SLC26A6Q9BXS9 759 aa16.59■□□□□ 0.25
COMMD4-205ENST00000562310 ZSCAN16Q9H4T2 348 aaPredicted RBP16.59■□□□□ 0.25
COMMD4-205ENST00000562310 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.59■□□□□ 0.25
COMMD4-205ENST00000562310 TRIM29Q14134 588 aa16.58■□□□□ 0.24
COMMD4-205ENST00000562310 GPR162Q16538 588 aa16.58■□□□□ 0.24
COMMD4-205ENST00000562310 ABCB5Q2M3G0 1257 aa16.58■□□□□ 0.24
COMMD4-205ENST00000562310 RBM26Q5T8P6 1007 aaKnown RBP16.58■□□□□ 0.24
COMMD4-205ENST00000562310 SAMD7Q7Z3H4 446 aa16.58■□□□□ 0.24
COMMD4-205ENST00000562310 NBPF11Q86T75 865 aa16.58■□□□□ 0.24
COMMD4-205ENST00000562310 PHKBQ93100 1093 aa16.58■□□□□ 0.24
COMMD4-205ENST00000562310 HOOK2Q96ED9 719 aa16.58■□□□□ 0.24
COMMD4-205ENST00000562310 ALG1Q9BT22 464 aa16.58■□□□□ 0.24
COMMD4-205ENST00000562310 KANSL2Q9H9L4 492 aa16.58■□□□□ 0.24
COMMD4-205ENST00000562310 CABP5Q9NP86 173 aa16.58■□□□□ 0.24
COMMD4-205ENST00000562310 SYNPO2Q9UMS6 1093 aa16.58■□□□□ 0.24
COMMD4-205ENST00000562310 ATAD5Q96QE3 1844 aa16.58■□□□□ 0.24
COMMD4-205ENST00000562310 CNTNAP5Q8WYK1 1306 aa16.57■□□□□ 0.24
COMMD4-205ENST00000562310 PRPF3O43395 683 aaKnown RBP16.57■□□□□ 0.24
COMMD4-205ENST00000562310 DTNBO60941 627 aa16.57■□□□□ 0.24
COMMD4-205ENST00000562310 FUT2Q10981 343 aa16.57■□□□□ 0.24
COMMD4-205ENST00000562310 RASA3Q14644 834 aa16.57■□□□□ 0.24
COMMD4-205ENST00000562310 FBXO18Q8NFZ0 1043 aa16.57■□□□□ 0.24
COMMD4-205ENST00000562310 TMEM39BQ9GZU3 492 aa16.57■□□□□ 0.24
COMMD4-205ENST00000562310 NYAP2Q9P242 653 aa16.57■□□□□ 0.24
COMMD4-205ENST00000562310 PGAP2Q9UHJ9 254 aa16.57■□□□□ 0.24
COMMD4-205ENST00000562310 HACL1Q9UJ83 578 aa16.57■□□□□ 0.24
COMMD4-205ENST00000562310 PPP2R3BQ9Y5P8 575 aa16.57■□□□□ 0.24
COMMD4-205ENST00000562310 PITPNM2Q9BZ72 1349 aa16.56■□□□□ 0.24
COMMD4-205ENST00000562310 FAM196BA6NMK8 535 aa16.56■□□□□ 0.24
COMMD4-205ENST00000562310 PLEKHA8P1O95397 391 aa16.56■□□□□ 0.24
COMMD4-205ENST00000562310 EGFRP00533 1210 aa16.56■□□□□ 0.24
COMMD4-205ENST00000562310 PARP1P09874 1014 aaKnown RBP16.56■□□□□ 0.24
COMMD4-205ENST00000562310 XBP1P17861 261 aa16.56■□□□□ 0.24
COMMD4-205ENST00000562310 MAP3K10Q02779 954 aa16.56■□□□□ 0.24
COMMD4-205ENST00000562310 RESTQ13127 1097 aa16.56■□□□□ 0.24
COMMD4-205ENST00000562310 NBR1Q14596 966 aa16.56■□□□□ 0.24
COMMD4-205ENST00000562310 CSPP1Q1MSJ5 1256 aa16.56■□□□□ 0.24
COMMD4-205ENST00000562310 ASPRV1Q53RT3 343 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms