RNA–Protein interactions for RNA: ENST00000561878.1

TMEM170A-202, Transcript of transmembrane protein 170A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM170A, Length 1,072 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM170A-202ENST00000561878 USP17L17D6RBQ6 530 aa28.27■■■□□ 2.12
TMEM170A-202ENST00000561878 USP17L19D6RCP7 530 aa28.27■■■□□ 2.12
TMEM170A-202ENST00000561878 USP17L20D6RJB6 530 aa28.27■■■□□ 2.12
TMEM170A-202ENST00000561878 USP17L24Q0WX57 530 aa28.27■■■□□ 2.12
TMEM170A-202ENST00000561878 UNC93B1Q9H1C4 597 aa28.27■■■□□ 2.12
TMEM170A-202ENST00000561878 MYH8P13535 1937 aa28.27■■■□□ 2.12
TMEM170A-202ENST00000561878 MPHOSPH10O00566 681 aaKnown RBP28.26■■■□□ 2.11
TMEM170A-202ENST00000561878 SLC34A2O95436 690 aa28.26■■■□□ 2.11
TMEM170A-202ENST00000561878 CAPN2P17655 700 aa28.26■■■□□ 2.11
TMEM170A-202ENST00000561878 CCAR1Q8IX12 1150 aaKnown RBP28.26■■■□□ 2.11
TMEM170A-202ENST00000561878 U2AF1L4Q8WU68 220 aaKnown RBP28.25■■■□□ 2.11
TMEM170A-202ENST00000561878 TXNRD2Q9NNW7 524 aa28.25■■■□□ 2.11
TMEM170A-202ENST00000561878 BAZ2AQ9UIF9 1905 aaKnown RBP28.24■■■□□ 2.11
TMEM170A-202ENST00000561878 PRKAB2O43741 272 aa28.24■■■□□ 2.11
TMEM170A-202ENST00000561878 MAPK4P31152 587 aa28.24■■■□□ 2.11
TMEM170A-202ENST00000561878 ERVK-9P63128 1117 aa28.24■■■□□ 2.11
TMEM170A-202ENST00000561878 ERVK-24P63145 666 aa28.24■■■□□ 2.11
TMEM170A-202ENST00000561878 SEPT2Q15019 361 aa28.24■■■□□ 2.11
TMEM170A-202ENST00000561878 SLFNL1Q499Z3 407 aa28.24■■■□□ 2.11
TMEM170A-202ENST00000561878 ACER1Q8TDN7 264 aa28.24■■■□□ 2.11
TMEM170A-202ENST00000561878 SOCS4Q8WXH5 440 aa28.24■■■□□ 2.11
TMEM170A-202ENST00000561878 PAGR1Q9BTK6 254 aa28.24■■■□□ 2.11
TMEM170A-202ENST00000561878 RBPJLQ9UBG7 517 aa28.24■■■□□ 2.11
TMEM170A-202ENST00000561878 GJD2Q9UKL4 321 aa28.24■■■□□ 2.11
TMEM170A-202ENST00000561878 HMGCRP04035 888 aa28.23■■■□□ 2.11
TMEM170A-202ENST00000561878 CYP2D6P10635 497 aa28.23■■■□□ 2.11
TMEM170A-202ENST00000561878 VCAM1P19320 739 aa28.23■■■□□ 2.11
TMEM170A-202ENST00000561878 GUCY1A2P33402 732 aa28.23■■■□□ 2.11
TMEM170A-202ENST00000561878 TMEM179Q6ZVK1 233 aa28.23■■■□□ 2.11
TMEM170A-202ENST00000561878 SGPL1O95470 568 aa28.22■■■□□ 2.11
TMEM170A-202ENST00000561878 EVX2Q03828 476 aa28.22■■■□□ 2.11
TMEM170A-202ENST00000561878 CATSPERGQ6ZRH7 1159 aa28.22■■■□□ 2.11
TMEM170A-202ENST00000561878 NUDT12Q9BQG2 462 aa28.22■■■□□ 2.11
TMEM170A-202ENST00000561878 RABGAP1Q9Y3P9 1069 aa28.22■■■□□ 2.11
TMEM170A-202ENST00000561878 SLC4A4Q9Y6R1 1079 aa28.22■■■□□ 2.11
TMEM170A-202ENST00000561878 PLXNB2O15031 1838 aa28.21■■■□□ 2.11
TMEM170A-202ENST00000561878 RRP1P56182 461 aaKnown RBP28.2■■■□□ 2.1
TMEM170A-202ENST00000561878 CCNA1P78396 465 aa28.2■■■□□ 2.1
TMEM170A-202ENST00000561878 C12orf60Q5U649 245 aa28.2■■■□□ 2.1
TMEM170A-202ENST00000561878 KBTBD3Q8NAB2 608 aa28.2■■■□□ 2.1
TMEM170A-202ENST00000561878 SLC44A5Q8NCS7 719 aa28.2■■■□□ 2.1
TMEM170A-202ENST00000561878 DYNLL2Q96FJ2 89 aa28.2■■■□□ 2.1
TMEM170A-202ENST00000561878 CCDC17Q96LX7 622 aa28.2■■■□□ 2.1
TMEM170A-202ENST00000561878 CWC22Q9HCG8 908 aaKnown RBP28.2■■■□□ 2.1
TMEM170A-202ENST00000561878 PAK6Q9NQU5 681 aaPredicted RBP28.2■■■□□ 2.1
TMEM170A-202ENST00000561878 USP17L12C9JPN9 530 aa28.19■■■□□ 2.1
TMEM170A-202ENST00000561878 USP17L21D6R901 530 aa28.19■■■□□ 2.1
TMEM170A-202ENST00000561878 PEX10O60683 326 aa28.19■■■□□ 2.1
TMEM170A-202ENST00000561878 CHGBP05060 677 aa28.19■■■□□ 2.1
TMEM170A-202ENST00000561878 Q3C1V9 767 aa28.19■■■□□ 2.1
TMEM170A-202ENST00000561878 DEFB118Q96PH6 123 aa28.19■■■□□ 2.1
TMEM170A-202ENST00000561878 HTATIP2Q9BUP3 242 aa28.19■■■□□ 2.1
TMEM170A-202ENST00000561878 PUS7LQ9H0K6 701 aaKnown RBP28.19■■■□□ 2.1
TMEM170A-202ENST00000561878 RPAP3Q9H6T3 665 aaPredicted RBP28.19■■■□□ 2.1
TMEM170A-202ENST00000561878 FARP2O94887 1054 aaPredicted RBP28.18■■■□□ 2.1
TMEM170A-202ENST00000561878 TFRCP02786 760 aaKnown RBP28.18■■■□□ 2.1
TMEM170A-202ENST00000561878 CYP2B6P20813 491 aa28.18■■■□□ 2.1
TMEM170A-202ENST00000561878 LBX2Q6XYB7 198 aa28.18■■■□□ 2.1
TMEM170A-202ENST00000561878 TRMT44Q8IYL2 757 aaKnown RBP28.18■■■□□ 2.1
TMEM170A-202ENST00000561878 XRN2Q9H0D6 950 aaKnown RBP eCLIP28.18■■■□□ 2.14e-7■□□□□ 8.1
TMEM170A-202ENST00000561878 PORCNQ9H237 461 aa28.18■■■□□ 2.1
TMEM170A-202ENST00000561878 SH2D4AQ9H788 454 aa28.18■■■□□ 2.1
TMEM170A-202ENST00000561878 XRCC5P13010 732 aaKnown RBP28.17■■■□□ 2.1
TMEM170A-202ENST00000561878 LRRFIP1Q32MZ4 808 aaKnown RBP28.17■■■□□ 2.1
TMEM170A-202ENST00000561878 GPR142Q7Z601 462 aa28.17■■■□□ 2.1
TMEM170A-202ENST00000561878 PLEKHH3Q7Z736 793 aa28.17■■■□□ 2.1
TMEM170A-202ENST00000561878 UBE2Q1Q7Z7E8 422 aa28.17■■■□□ 2.1
TMEM170A-202ENST00000561878 ARHGEF10LQ9HCE6 1279 aa28.17■■■□□ 2.1
TMEM170A-202ENST00000561878 ARPP21Q9UBL0 812 aaPredicted RBP28.17■■■□□ 2.1
TMEM170A-202ENST00000561878 PCDHB15Q9Y5E8 787 aa28.17■■■□□ 2.1
TMEM170A-202ENST00000561878 TTC41PQ6P2S7 1318 aa28.17■■■□□ 2.1
TMEM170A-202ENST00000561878 RPTORQ8N122 1335 aa28.17■■■□□ 2.1
TMEM170A-202ENST00000561878 GLRX3O76003 335 aaKnown RBP28.16■■■□□ 2.1
TMEM170A-202ENST00000561878 ZFYP08048 801 aaPredicted RBP28.16■■■□□ 2.1
TMEM170A-202ENST00000561878 CDK8P49336 464 aa28.16■■■□□ 2.1
TMEM170A-202ENST00000561878 C16orf86Q6ZW13 317 aa28.16■■■□□ 2.1
TMEM170A-202ENST00000561878 APPBP2Q92624 585 aa28.16■■■□□ 2.1
TMEM170A-202ENST00000561878 HMX1Q9NP08 348 aaPredicted RBP28.16■■■□□ 2.1
TMEM170A-202ENST00000561878 CYP2D7A0A087X1C5 515 aa28.15■■■□□ 2.1
TMEM170A-202ENST00000561878 A0A1W2PRG0 241 aa28.15■■■□□ 2.1
TMEM170A-202ENST00000561878 ERC2O15083 957 aa28.15■■■□□ 2.1
TMEM170A-202ENST00000561878 AKR1B1P15121 316 aa28.15■■■□□ 2.1
TMEM170A-202ENST00000561878 RGS2P41220 211 aa28.15■■■□□ 2.1
TMEM170A-202ENST00000561878 ICA1Q05084 483 aa28.15■■■□□ 2.1
TMEM170A-202ENST00000561878 TSHZ3Q63HK5 1081 aa28.15■■■□□ 2.1
TMEM170A-202ENST00000561878 POTEEQ6S8J3 1075 aa28.15■■■□□ 2.1
TMEM170A-202ENST00000561878 TRIB2Q92519 343 aa28.15■■■□□ 2.1
TMEM170A-202ENST00000561878 DPF3Q92784 378 aa28.15■■■□□ 2.1
TMEM170A-202ENST00000561878 CNMDO75829 334 aa28.14■■■□□ 2.1
TMEM170A-202ENST00000561878 CTR9Q6PD62 1173 aa28.14■■■□□ 2.1
TMEM170A-202ENST00000561878 LPAR1Q92633 364 aa28.14■■■□□ 2.1
TMEM170A-202ENST00000561878 STRBPQ96SI9 672 aaKnown RBP28.14■■■□□ 2.1
TMEM170A-202ENST00000561878 CRISPLD2Q9H0B8 497 aa28.14■■■□□ 2.1
TMEM170A-202ENST00000561878 SPDYE16A6NNV3 312 aaPredicted RBP28.13■■■□□ 2.09
TMEM170A-202ENST00000561878 RNF113AO15541 343 aaKnown RBP28.13■■■□□ 2.09
TMEM170A-202ENST00000561878 ZKSCAN1P17029 563 aaPredicted RBP28.13■■■□□ 2.09
TMEM170A-202ENST00000561878 MORN1Q5T089 497 aa28.13■■■□□ 2.09
TMEM170A-202ENST00000561878 GIMAP6Q6P9H5 292 aa28.13■■■□□ 2.09
TMEM170A-202ENST00000561878 TANGO6Q9C0B7 1094 aa28.13■■■□□ 2.09
TMEM170A-202ENST00000561878 HOXC10Q9NYD6 342 aa28.13■■■□□ 2.09
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms