RNA–Protein interactions for RNA: ENST00000561514.1

PALB2-202, Transcript of partner and localizer of BRCA2, humanhuman

TSL 5

Gene PALB2, Length 815 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-202ENST00000561514 OS9Q13438 667 aaPredicted RBP10.24□□□□□ -0.77
PALB2-202ENST00000561514 Q3C1V9 767 aa10.24□□□□□ -0.77
PALB2-202ENST00000561514 LHX8Q68G74 356 aa10.24□□□□□ -0.77
PALB2-202ENST00000561514 GPR142Q7Z601 462 aa10.24□□□□□ -0.77
PALB2-202ENST00000561514 PLEKHH3Q7Z736 793 aa10.24□□□□□ -0.77
PALB2-202ENST00000561514 ERC1Q8IUD2 1116 aa10.24□□□□□ -0.77
PALB2-202ENST00000561514 C11orf49Q9H6J7 331 aa10.24□□□□□ -0.77
PALB2-202ENST00000561514 C1orf115Q9H7X2 142 aa10.24□□□□□ -0.77
PALB2-202ENST00000561514 SERPINB13Q9UIV8 391 aa10.24□□□□□ -0.77
PALB2-202ENST00000561514 TAOK2Q9UL54 1235 aa10.24□□□□□ -0.77
PALB2-202ENST00000561514 DOCK3Q8IZD9 2030 aa10.24□□□□□ -0.77
PALB2-202ENST00000561514 DDX60LQ5H9U9 1706 aaKnown RBP10.24□□□□□ -0.77
PALB2-202ENST00000561514 FOCADQ5VW36 1801 aa10.23□□□□□ -0.77
PALB2-202ENST00000561514 USP17L15C9J2P7 530 aa10.23□□□□□ -0.77
PALB2-202ENST00000561514 USP17L13C9JLJ4 530 aa10.23□□□□□ -0.77
PALB2-202ENST00000561514 USP17L11C9JVI0 530 aa10.23□□□□□ -0.77
PALB2-202ENST00000561514 USP17L18D6R9N7 530 aa10.23□□□□□ -0.77
PALB2-202ENST00000561514 USP17L22D6RA61 530 aa10.23□□□□□ -0.77
PALB2-202ENST00000561514 USP17L17D6RBQ6 530 aa10.23□□□□□ -0.77
PALB2-202ENST00000561514 USP17L19D6RCP7 530 aa10.23□□□□□ -0.77
PALB2-202ENST00000561514 USP17L20D6RJB6 530 aa10.23□□□□□ -0.77
PALB2-202ENST00000561514 IDH1O75874 414 aaKnown RBP10.23□□□□□ -0.77
PALB2-202ENST00000561514 ZKSCAN1P17029 563 aaPredicted RBP10.23□□□□□ -0.77
PALB2-202ENST00000561514 VCAM1P19320 739 aa10.23□□□□□ -0.77
PALB2-202ENST00000561514 CYP2B6P20813 491 aa10.23□□□□□ -0.77
PALB2-202ENST00000561514 RGS2P41220 211 aa10.23□□□□□ -0.77
PALB2-202ENST00000561514 USP14P54578 494 aa10.23□□□□□ -0.77
PALB2-202ENST00000561514 CACNB2Q08289 660 aaPredicted RBP10.23□□□□□ -0.77
PALB2-202ENST00000561514 USP17L24Q0WX57 530 aa10.23□□□□□ -0.77
PALB2-202ENST00000561514 MAP3K12Q12852 859 aa10.23□□□□□ -0.77
PALB2-202ENST00000561514 PDE3AQ14432 1141 aa10.23□□□□□ -0.77
PALB2-202ENST00000561514 LRIT3Q3SXY7 679 aa10.23□□□□□ -0.77
PALB2-202ENST00000561514 CATSPERGQ6ZRH7 1159 aa10.23□□□□□ -0.77
PALB2-202ENST00000561514 ITPRIPQ8IWB1 547 aa10.23□□□□□ -0.77
PALB2-202ENST00000561514 FTSJ3Q8IY81 847 aaKnown RBP10.23□□□□□ -0.77
PALB2-202ENST00000561514 MIGA1Q8NAN2 632 aa10.23□□□□□ -0.77
PALB2-202ENST00000561514 PPIL4Q8WUA2 492 aaKnown RBP eCLIP10.23□□□□□ -0.77
PALB2-202ENST00000561514 TRIM34Q9BYJ4 488 aa10.23□□□□□ -0.77
PALB2-202ENST00000561514 CCDC8Q9H0W5 538 aaPredicted RBP10.23□□□□□ -0.77
PALB2-202ENST00000561514 ANTXR1Q9H6X2 564 aa10.23□□□□□ -0.77
PALB2-202ENST00000561514 STAP2Q9UGK3 403 aa10.23□□□□□ -0.77
PALB2-202ENST00000561514 SAP30BPQ9UHR5 308 aaKnown RBP10.23□□□□□ -0.77
PALB2-202ENST00000561514 ATAD5Q96QE3 1844 aa10.23□□□□□ -0.77
PALB2-202ENST00000561514 GUCY1A2P33402 732 aa10.22□□□□□ -0.77
PALB2-202ENST00000561514 MAP2K5Q13163 448 aa10.22□□□□□ -0.77
PALB2-202ENST00000561514 GRB14Q14449 540 aa10.22□□□□□ -0.77
PALB2-202ENST00000561514 CCL14Q16627 93 aa10.22□□□□□ -0.77
PALB2-202ENST00000561514 TTC6Q86TZ1 520 aa10.22□□□□□ -0.77
PALB2-202ENST00000561514 MAGEB6Q8N7X4 407 aa10.22□□□□□ -0.77
PALB2-202ENST00000561514 TCRBV5S4A2TA0A5A2 114 aa10.21□□□□□ -0.77
PALB2-202ENST00000561514 SLC15A5A6NIM6 579 aa10.21□□□□□ -0.77
PALB2-202ENST00000561514 SPDYE16A6NNV3 312 aaPredicted RBP10.21□□□□□ -0.77
PALB2-202ENST00000561514 PLCD1P51178 756 aa10.21□□□□□ -0.77
PALB2-202ENST00000561514 CCNA1P78396 465 aa10.21□□□□□ -0.77
PALB2-202ENST00000561514 ABCB5Q2M3G0 1257 aa10.21□□□□□ -0.77
PALB2-202ENST00000561514 CERKLQ49MI3 558 aaPredicted RBP10.21□□□□□ -0.77
PALB2-202ENST00000561514 HSP90AB4PQ58FF6 505 aa10.21□□□□□ -0.77
PALB2-202ENST00000561514 C7orf61Q8IZ16 206 aa10.21□□□□□ -0.77
PALB2-202ENST00000561514 ACER1Q8TDN7 264 aa10.21□□□□□ -0.77
PALB2-202ENST00000561514 LRCH3Q96II8 777 aa10.21□□□□□ -0.77
PALB2-202ENST00000561514 PKNOX2Q96KN3 472 aa10.21□□□□□ -0.77
PALB2-202ENST00000561514 PAGR1Q9BTK6 254 aa10.21□□□□□ -0.77
PALB2-202ENST00000561514 SUPT16HQ9Y5B9 1047 aaKnown RBP10.21□□□□□ -0.77
PALB2-202ENST00000561514 ALPK3Q96L96 1907 aa10.21□□□□□ -0.78
PALB2-202ENST00000561514 PDE6AP16499 860 aa10.2□□□□□ -0.78
PALB2-202ENST00000561514 PTPREP23469 700 aa10.2□□□□□ -0.78
PALB2-202ENST00000561514 CCND3P30281 292 aaPredicted RBP10.2□□□□□ -0.78
PALB2-202ENST00000561514 MAGEA10P43363 369 aaPredicted RBP10.2□□□□□ -0.78
PALB2-202ENST00000561514 USP5P45974 858 aa10.2□□□□□ -0.78
PALB2-202ENST00000561514 TTF1Q15361 905 aaPredicted RBP10.2□□□□□ -0.78
PALB2-202ENST00000561514 AACSQ86V21 672 aa10.2□□□□□ -0.78
PALB2-202ENST00000561514 RHPN1Q8TCX5 695 aa10.2□□□□□ -0.78
PALB2-202ENST00000561514 CDK5RAP2Q96SN8 1893 aa10.2□□□□□ -0.78
PALB2-202ENST00000561514 FEZ1Q99689 392 aa10.2□□□□□ -0.78
PALB2-202ENST00000561514 FLRT1Q9NZU1 646 aa10.2□□□□□ -0.78
PALB2-202ENST00000561514 BTBD7Q9P203 1132 aa10.2□□□□□ -0.78
PALB2-202ENST00000561514 ZMYND8Q9ULU4 1186 aaPredicted RBP10.2□□□□□ -0.78
PALB2-202ENST00000561514 EXOC6BQ9Y2D4 811 aa10.2□□□□□ -0.78
PALB2-202ENST00000561514 NDUFB9Q9Y6M9 179 aa10.2□□□□□ -0.78
PALB2-202ENST00000561514 A0A0C4DFX4 3053 aa10.2□□□□□ -0.78
PALB2-202ENST00000561514 ZBED9Q6R2W3 1325 aa10.19□□□□□ -0.78
PALB2-202ENST00000561514 A0A1W2PRG0 241 aa10.19□□□□□ -0.78
PALB2-202ENST00000561514 MSCO60682 206 aa10.19□□□□□ -0.78
PALB2-202ENST00000561514 GLRX3O76003 335 aaKnown RBP10.19□□□□□ -0.78
PALB2-202ENST00000561514 CYBAP13498 195 aa10.19□□□□□ -0.78
PALB2-202ENST00000561514 LRRC26Q2I0M4 334 aa10.19□□□□□ -0.78
PALB2-202ENST00000561514 TDHQ8IZJ6 230 aa10.19□□□□□ -0.78
PALB2-202ENST00000561514 SHCBP1Q8NEM2 672 aa10.19□□□□□ -0.78
PALB2-202ENST00000561514 EDC3Q96F86 508 aaKnown RBP10.19□□□□□ -0.78
PALB2-202ENST00000561514 CRNKL1Q9BZJ0 848 aaKnown RBP10.19□□□□□ -0.78
PALB2-202ENST00000561514 CABP5Q9NP86 173 aa10.19□□□□□ -0.78
PALB2-202ENST00000561514 DCP1AQ9NPI6 582 aaPredicted RBP10.19□□□□□ -0.78
PALB2-202ENST00000561514 ZNF236Q9UL36 1845 aa10.19□□□□□ -0.78
PALB2-202ENST00000561514 COL6A3P12111 3177 aa10.18□□□□□ -0.78
PALB2-202ENST00000561514 MAGEB6P1A0A0J9YX57 407 aa10.18□□□□□ -0.78
PALB2-202ENST00000561514 HNRNPUQ00839 825 aaKnown RBP eCLIP10.18□□□□□ -0.78
PALB2-202ENST00000561514 EVX2Q03828 476 aa10.18□□□□□ -0.78
PALB2-202ENST00000561514 SEPT2Q15019 361 aa10.18□□□□□ -0.78
PALB2-202ENST00000561514 RAB3GAP1Q15042 981 aa10.18□□□□□ -0.78
PALB2-202ENST00000561514 ZYXQ15942 572 aaKnown RBP10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms