RNA–Protein interactions for RNA: ENST00000561415.1

IRF9-215, Transcript of interferon regulatory factor 9, humanhuman

TSL 2

Gene IRF9, Length 1,769 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF9-215ENST00000561415 CATIPQ7Z7H3 387 aa22.86■■□□□ 1.25
IRF9-215ENST00000561415 CHMP4CQ96CF2 233 aa22.86■■□□□ 1.25
IRF9-215ENST00000561415 MYL10Q9BUA6 226 aa22.86■■□□□ 1.25
IRF9-215ENST00000561415 NCOA5Q9HCD5 579 aaKnown RBP22.86■■□□□ 1.25
IRF9-215ENST00000561415 RRP1BQ14684 758 aaKnown RBP22.85■■□□□ 1.25
IRF9-215ENST00000561415 ABCB5Q2M3G0 1257 aa22.85■■□□□ 1.25
IRF9-215ENST00000561415 NBPF12Q5TAG4 269 aaPredicted RBP22.85■■□□□ 1.25
IRF9-215ENST00000561415 TMEM179Q6ZVK1 233 aa22.85■■□□□ 1.25
IRF9-215ENST00000561415 PNMA8AQ86V59 439 aaPredicted RBP22.85■■□□□ 1.25
IRF9-215ENST00000561415 RAB11FIP4Q86YS3 637 aa22.85■■□□□ 1.25
IRF9-215ENST00000561415 HOOK2Q96ED9 719 aa22.85■■□□□ 1.25
IRF9-215ENST00000561415 MYH4Q9Y623 1939 aa22.85■■□□□ 1.25
IRF9-215ENST00000561415 DDAH1O94760 285 aa22.84■■□□□ 1.25
IRF9-215ENST00000561415 GDF11O95390 407 aa22.84■■□□□ 1.25
IRF9-215ENST00000561415 RXRAP19793 462 aa22.84■■□□□ 1.25
IRF9-215ENST00000561415 DDIT3P35638 169 aa22.84■■□□□ 1.25
IRF9-215ENST00000561415 TROAPQ12815 778 aa22.84■■□□□ 1.25
IRF9-215ENST00000561415 PPP4R3BQ5MIZ7 849 aa22.84■■□□□ 1.25
IRF9-215ENST00000561415 SULF1Q8IWU6 871 aa22.84■■□□□ 1.25
IRF9-215ENST00000561415 KAT14Q9H8E8 782 aa22.84■■□□□ 1.25
IRF9-215ENST00000561415 CWC22Q9HCG8 908 aaKnown RBP22.84■■□□□ 1.25
IRF9-215ENST00000561415 GOLGA8AA7E2F4 631 aa22.84■■□□□ 1.25
IRF9-215ENST00000561415 DHX16O60231 1041 aaKnown RBP22.84■■□□□ 1.25
IRF9-215ENST00000561415 SHROOM1Q2M3G4 852 aaPredicted RBP22.84■■□□□ 1.25
IRF9-215ENST00000561415 TMEM47Q9BQJ4 181 aa22.84■■□□□ 1.25
IRF9-215ENST00000561415 LLPHQ9BRT6 129 aaKnown RBP22.84■■□□□ 1.25
IRF9-215ENST00000561415 ATAD5Q96QE3 1844 aa22.83■■□□□ 1.25
IRF9-215ENST00000561415 TTLL1O95922 423 aa22.83■■□□□ 1.24
IRF9-215ENST00000561415 CALM1P0DP23 149 aa22.83■■□□□ 1.24
IRF9-215ENST00000561415 CALM2P0DP24 149 aa22.83■■□□□ 1.24
IRF9-215ENST00000561415 CALM3P0DP25 149 aa22.83■■□□□ 1.24
IRF9-215ENST00000561415 DCAF15Q66K64 600 aa22.83■■□□□ 1.24
IRF9-215ENST00000561415 PNMA1Q8ND90 353 aa22.83■■□□□ 1.24
IRF9-215ENST00000561415 SSC5DA1L4H1 1573 aa22.82■■□□□ 1.24
IRF9-215ENST00000561415 PHF20L1A8MW92 1017 aa22.82■■□□□ 1.24
IRF9-215ENST00000561415 GH2P01242 217 aa22.82■■□□□ 1.24
IRF9-215ENST00000561415 TOP1P11387 765 aaKnown RBP22.82■■□□□ 1.24
IRF9-215ENST00000561415 GUCY1A2P33402 732 aa22.82■■□□□ 1.24
IRF9-215ENST00000561415 PRAMEF18Q5VWM3 479 aa22.82■■□□□ 1.24
IRF9-215ENST00000561415 CLEC10AQ8IUN9 316 aa22.82■■□□□ 1.24
IRF9-215ENST00000561415 KANSL2Q9H9L4 492 aa22.82■■□□□ 1.24
IRF9-215ENST00000561415 CABP5Q9NP86 173 aa22.82■■□□□ 1.24
IRF9-215ENST00000561415 SMC3Q9UQE7 1217 aa22.82■■□□□ 1.24
IRF9-215ENST00000561415 CAP2P40123 477 aa22.81■■□□□ 1.24
IRF9-215ENST00000561415 JAG1P78504 1218 aa22.81■■□□□ 1.24
IRF9-215ENST00000561415 PPP2R5BQ15173 497 aa22.81■■□□□ 1.24
IRF9-215ENST00000561415 EAPPQ56P03 285 aaPredicted RBP22.81■■□□□ 1.24
IRF9-215ENST00000561415 KRT26Q7Z3Y9 468 aa22.81■■□□□ 1.24
IRF9-215ENST00000561415 CCDC144CPQ8IYA2 1237 aa22.81■■□□□ 1.24
IRF9-215ENST00000561415 FANCBQ8NB91 859 aa22.81■■□□□ 1.24
IRF9-215ENST00000561415 NUP133Q8WUM0 1156 aa22.81■■□□□ 1.24
IRF9-215ENST00000561415 FAM217BQ9NTX9 383 aaPredicted RBP22.81■■□□□ 1.24
IRF9-215ENST00000561415 CTDNEP1O95476 244 aa22.81■■□□□ 1.24
IRF9-215ENST00000561415 CDC27P30260 824 aa22.81■■□□□ 1.24
IRF9-215ENST00000561415 SEPT2Q15019 361 aa22.81■■□□□ 1.24
IRF9-215ENST00000561415 RTN1Q16799 776 aa22.81■■□□□ 1.24
IRF9-215ENST00000561415 SUPT20HL1Q3ZLR7 823 aa22.81■■□□□ 1.24
IRF9-215ENST00000561415 NSUN7Q8NE18 718 aaKnown RBP22.81■■□□□ 1.24
IRF9-215ENST00000561415 ZBTB21Q9ULJ3 1066 aa22.81■■□□□ 1.24
IRF9-215ENST00000561415 CCDC196A0A1B0GTZ2 297 aa22.8■■□□□ 1.24
IRF9-215ENST00000561415 ADM5C9JUS6 153 aa22.8■■□□□ 1.24
IRF9-215ENST00000561415 ADD1P35611 737 aaKnown RBP22.8■■□□□ 1.24
IRF9-215ENST00000561415 SMARCC2Q8TAQ2 1214 aa22.8■■□□□ 1.24
IRF9-215ENST00000561415 MAP3K14Q99558 947 aa22.8■■□□□ 1.24
IRF9-215ENST00000561415 NYAP2Q9P242 653 aa22.8■■□□□ 1.24
IRF9-215ENST00000561415 CPLX1O14810 134 aa22.79■■□□□ 1.24
IRF9-215ENST00000561415 VEGFAP15692 232 aaPredicted RBP22.79■■□□□ 1.24
IRF9-215ENST00000561415 ICA1Q05084 483 aa22.79■■□□□ 1.24
IRF9-215ENST00000561415 ZNF341Q9BYN7 854 aa22.79■■□□□ 1.24
IRF9-215ENST00000561415 CLIP2Q9UDT6 1046 aa22.79■■□□□ 1.24
IRF9-215ENST00000561415 JAK2O60674 1132 aa22.78■■□□□ 1.24
IRF9-215ENST00000561415 GJB2P29033 226 aa22.78■■□□□ 1.24
IRF9-215ENST00000561415 RAB3GAP1Q15042 981 aa22.78■■□□□ 1.24
IRF9-215ENST00000561415 CIZ1Q9ULV3 898 aaPredicted RBP22.78■■□□□ 1.24
IRF9-215ENST00000561415 DOCK1Q14185 1865 aa22.78■■□□□ 1.24
IRF9-215ENST00000561415 PTPDC1A2A3K4 754 aa22.78■■□□□ 1.24
IRF9-215ENST00000561415 ASNSP08243 561 aa22.78■■□□□ 1.24
IRF9-215ENST00000561415 NTRK3Q16288 839 aa22.78■■□□□ 1.24
IRF9-215ENST00000561415 CPLX2Q6PUV4 134 aaKnown RBP22.78■■□□□ 1.24
IRF9-215ENST00000561415 MKL1Q969V6 931 aa22.78■■□□□ 1.24
IRF9-215ENST00000561415 RBM28Q9NW13 759 aaKnown RBP22.78■■□□□ 1.24
IRF9-215ENST00000561415 ZNF112Q9UJU3 913 aa22.78■■□□□ 1.24
IRF9-215ENST00000561415 CTNND1O60716 968 aaKnown RBP22.77■■□□□ 1.24
IRF9-215ENST00000561415 DTNBO60941 627 aa22.77■■□□□ 1.24
IRF9-215ENST00000561415 CDKL5O76039 1030 aa22.77■■□□□ 1.24
IRF9-215ENST00000561415 EEF2P13639 858 aaKnown RBP22.77■■□□□ 1.24
IRF9-215ENST00000561415 HMGN5P82970 282 aaKnown RBP22.77■■□□□ 1.24
IRF9-215ENST00000561415 SIAH1Q8IUQ4 282 aa22.77■■□□□ 1.24
IRF9-215ENST00000561415 LRRC47Q8N1G4 583 aaKnown RBP22.77■■□□□ 1.24
IRF9-215ENST00000561415 CTCFLQ8NI51 663 aaPredicted RBP22.77■■□□□ 1.24
IRF9-215ENST00000561415 RRAGCQ9HB90 399 aa22.77■■□□□ 1.24
IRF9-215ENST00000561415 GINM1Q9NU53 330 aa22.77■■□□□ 1.24
IRF9-215ENST00000561415 IFNAR1P17181 557 aa22.76■■□□□ 1.23
IRF9-215ENST00000561415 KIF5BP33176 963 aa22.76■■□□□ 1.23
IRF9-215ENST00000561415 ATP2B2Q01814 1243 aa22.76■■□□□ 1.23
IRF9-215ENST00000561415 GRM4Q14833 912 aa22.76■■□□□ 1.23
IRF9-215ENST00000561415 CDC37L1Q7L3B6 337 aa22.76■■□□□ 1.23
IRF9-215ENST00000561415 CHMP5Q9NZZ3 219 aa22.76■■□□□ 1.23
IRF9-215ENST00000561415 SYNPO2Q9UMS6 1093 aa22.76■■□□□ 1.23
IRF9-215ENST00000561415 PAPPA2Q9BXP8 1791 aa22.75■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms