RNA–Protein interactions for RNA: ENST00000561065.1

LMX1B-204, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMX1B, Length 1,300 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-204ENST00000561065 IRF5Q13568 498 aa19.25■□□□□ 0.67
LMX1B-204ENST00000561065 SEPT2Q15019 361 aa19.25■□□□□ 0.67
LMX1B-204ENST00000561065 CRBNQ96SW2 442 aa19.25■□□□□ 0.67
LMX1B-204ENST00000561065 FEZ1Q99689 392 aa19.25■□□□□ 0.67
LMX1B-204ENST00000561065 KIAA1683Q9H0B3 1180 aa19.25■□□□□ 0.67
LMX1B-204ENST00000561065 INHAP05111 366 aa19.25■□□□□ 0.67
LMX1B-204ENST00000561065 VCAM1P19320 739 aa19.25■□□□□ 0.67
LMX1B-204ENST00000561065 CLEC10AQ8IUN9 316 aa19.25■□□□□ 0.67
LMX1B-204ENST00000561065 UNC93B1Q9H1C4 597 aa19.25■□□□□ 0.67
LMX1B-204ENST00000561065 RBPJLQ9UBG7 517 aa19.25■□□□□ 0.67
LMX1B-204ENST00000561065 A0A1W2PRG0 241 aa19.24■□□□□ 0.67
LMX1B-204ENST00000561065 KBTBD3Q8NAB2 608 aa19.24■□□□□ 0.67
LMX1B-204ENST00000561065 PXYLP1Q8TE99 480 aa19.24■□□□□ 0.67
LMX1B-204ENST00000561065 COA7Q96BR5 231 aa19.24■□□□□ 0.67
LMX1B-204ENST00000561065 GPATCH3Q96I76 525 aa19.24■□□□□ 0.67
LMX1B-204ENST00000561065 ATP8A2Q9NTI2 1148 aa19.24■□□□□ 0.67
LMX1B-204ENST00000561065 GJD2Q9UKL4 321 aa19.24■□□□□ 0.67
LMX1B-204ENST00000561065 AKR1B1P15121 316 aa19.23■□□□□ 0.67
LMX1B-204ENST00000561065 C12orf60Q5U649 245 aa19.23■□□□□ 0.67
LMX1B-204ENST00000561065 PI4K2BQ8TCG2 481 aa19.23■□□□□ 0.67
LMX1B-204ENST00000561065 PORCNQ9H237 461 aa19.23■□□□□ 0.67
LMX1B-204ENST00000561065 CABP5Q9NP86 173 aa19.23■□□□□ 0.67
LMX1B-204ENST00000561065 BIN2Q9UBW5 565 aaPredicted RBP19.23■□□□□ 0.67
LMX1B-204ENST00000561065 TAOK2Q9UL54 1235 aa19.23■□□□□ 0.67
LMX1B-204ENST00000561065 SALL3Q9BXA9 1300 aa19.22■□□□□ 0.67
LMX1B-204ENST00000561065 USP17L12C9JPN9 530 aa19.22■□□□□ 0.67
LMX1B-204ENST00000561065 USP17L21D6R901 530 aa19.22■□□□□ 0.67
LMX1B-204ENST00000561065 MPHOSPH10O00566 681 aaKnown RBP19.22■□□□□ 0.67
LMX1B-204ENST00000561065 CNMDO75829 334 aa19.22■□□□□ 0.67
LMX1B-204ENST00000561065 GJB1P08034 283 aa19.22■□□□□ 0.67
LMX1B-204ENST00000561065 ERVK-9P63128 1117 aa19.22■□□□□ 0.67
LMX1B-204ENST00000561065 ERVK-24P63145 666 aa19.22■□□□□ 0.67
LMX1B-204ENST00000561065 UBXN2AP68543 259 aa19.22■□□□□ 0.67
LMX1B-204ENST00000561065 Q3C1V9 767 aa19.22■□□□□ 0.67
LMX1B-204ENST00000561065 OSBP2Q969R2 916 aa19.22■□□□□ 0.67
LMX1B-204ENST00000561065 PAGR1Q9BTK6 254 aa19.22■□□□□ 0.67
LMX1B-204ENST00000561065 RNF208Q9H0X6 261 aa19.22■□□□□ 0.67
LMX1B-204ENST00000561065 SWAP70Q9UH65 585 aa19.22■□□□□ 0.67
LMX1B-204ENST00000561065 SLC4A4Q9Y6R1 1079 aa19.22■□□□□ 0.67
LMX1B-204ENST00000561065 GJA8P48165 433 aa19.21■□□□□ 0.67
LMX1B-204ENST00000561065 USP14P54578 494 aa19.21■□□□□ 0.67
LMX1B-204ENST00000561065 KIAA1755Q5JYT7 1200 aa19.21■□□□□ 0.67
LMX1B-204ENST00000561065 ZSCAN25Q6NSZ9 544 aa19.21■□□□□ 0.67
LMX1B-204ENST00000561065 UBE2Q1Q7Z7E8 422 aa19.21■□□□□ 0.67
LMX1B-204ENST00000561065 STRBPQ96SI9 672 aaKnown RBP19.21■□□□□ 0.67
LMX1B-204ENST00000561065 ALPK3Q96L96 1907 aa19.2■□□□□ 0.66
LMX1B-204ENST00000561065 USP17L15C9J2P7 530 aa19.2■□□□□ 0.66
LMX1B-204ENST00000561065 USP17L13C9JLJ4 530 aa19.2■□□□□ 0.66
LMX1B-204ENST00000561065 USP17L11C9JVI0 530 aa19.2■□□□□ 0.66
LMX1B-204ENST00000561065 USP17L18D6R9N7 530 aa19.2■□□□□ 0.66
LMX1B-204ENST00000561065 USP17L22D6RA61 530 aa19.2■□□□□ 0.66
LMX1B-204ENST00000561065 USP17L17D6RBQ6 530 aa19.2■□□□□ 0.66
LMX1B-204ENST00000561065 USP17L19D6RCP7 530 aa19.2■□□□□ 0.66
LMX1B-204ENST00000561065 USP17L20D6RJB6 530 aa19.2■□□□□ 0.66
LMX1B-204ENST00000561065 USP17L24Q0WX57 530 aa19.2■□□□□ 0.66
LMX1B-204ENST00000561065 TRIM32Q13049 653 aa19.2■□□□□ 0.66
LMX1B-204ENST00000561065 CTR9Q6PD62 1173 aa19.2■□□□□ 0.66
LMX1B-204ENST00000561065 CATSPERGQ6ZRH7 1159 aa19.2■□□□□ 0.66
LMX1B-204ENST00000561065 TMEM179Q6ZVK1 233 aa19.2■□□□□ 0.66
LMX1B-204ENST00000561065 C16orf86Q6ZW13 317 aa19.2■□□□□ 0.66
LMX1B-204ENST00000561065 SIAH1Q8IUQ4 282 aa19.2■□□□□ 0.66
LMX1B-204ENST00000561065 GPRC5AQ8NFJ5 357 aa19.2■□□□□ 0.66
LMX1B-204ENST00000561065 APPBP2Q92624 585 aa19.2■□□□□ 0.66
LMX1B-204ENST00000561065 RPAP3Q9H6T3 665 aaPredicted RBP19.2■□□□□ 0.66
LMX1B-204ENST00000561065 EPB41L4AQ9HCS5 686 aaPredicted RBP19.2■□□□□ 0.66
LMX1B-204ENST00000561065 COL11A1P12107 1806 aaPredicted RBP19.19■□□□□ 0.66
LMX1B-204ENST00000561065 FRMPD3Q5JV73 1810 aa19.19■□□□□ 0.66
LMX1B-204ENST00000561065 SPDYE16A6NNV3 312 aaPredicted RBP19.19■□□□□ 0.66
LMX1B-204ENST00000561065 M0R2C6 588 aa19.19■□□□□ 0.66
LMX1B-204ENST00000561065 CDK8P49336 464 aa19.19■□□□□ 0.66
LMX1B-204ENST00000561065 U2AF1L4Q8WU68 220 aaKnown RBP19.19■□□□□ 0.66
LMX1B-204ENST00000561065 TRIB2Q92519 343 aa19.19■□□□□ 0.66
LMX1B-204ENST00000561065 PAK6Q9NQU5 681 aaPredicted RBP19.19■□□□□ 0.66
LMX1B-204ENST00000561065 TTC41PQ6P2S7 1318 aa19.19■□□□□ 0.66
LMX1B-204ENST00000561065 ZNF236Q9UL36 1845 aa19.18■□□□□ 0.66
LMX1B-204ENST00000561065 GSG1L2A8MUP6 293 aa19.18■□□□□ 0.66
LMX1B-204ENST00000561065 GTF3C2Q8WUA4 911 aaPredicted RBP19.18■□□□□ 0.66
LMX1B-204ENST00000561065 BTBD7Q9P203 1132 aa19.18■□□□□ 0.66
LMX1B-204ENST00000561065 ROBO3Q96MS0 1386 aa19.18■□□□□ 0.66
LMX1B-204ENST00000561065 CEP290O15078 2479 aa19.17■□□□□ 0.66
LMX1B-204ENST00000561065 RNF113AO15541 343 aaKnown RBP19.17■□□□□ 0.66
LMX1B-204ENST00000561065 GPAA1O43292 621 aa19.17■□□□□ 0.66
LMX1B-204ENST00000561065 HMGCRP04035 888 aa19.17■□□□□ 0.66
LMX1B-204ENST00000561065 ICA1Q05084 483 aa19.17■□□□□ 0.66
LMX1B-204ENST00000561065 LBX2Q6XYB7 198 aa19.17■□□□□ 0.66
LMX1B-204ENST00000561065 GPR142Q7Z601 462 aa19.17■□□□□ 0.66
LMX1B-204ENST00000561065 USP6NLQ92738 828 aa19.17■□□□□ 0.66
LMX1B-204ENST00000561065 ARPP21Q9UBL0 812 aaPredicted RBP19.17■□□□□ 0.66
LMX1B-204ENST00000561065 MX1P20591 662 aa19.16■□□□□ 0.66
LMX1B-204ENST00000561065 CYP2B6P20813 491 aa19.16■□□□□ 0.66
LMX1B-204ENST00000561065 MAPK4P31152 587 aa19.16■□□□□ 0.66
LMX1B-204ENST00000561065 LRRFIP1Q32MZ4 808 aaKnown RBP19.16■□□□□ 0.66
LMX1B-204ENST00000561065 MORN1Q5T089 497 aa19.16■□□□□ 0.66
LMX1B-204ENST00000561065 NKX2-3Q8TAU0 364 aa19.16■□□□□ 0.66
LMX1B-204ENST00000561065 SOCS4Q8WXH5 440 aa19.16■□□□□ 0.66
LMX1B-204ENST00000561065 DEFB118Q96PH6 123 aa19.16■□□□□ 0.66
LMX1B-204ENST00000561065 SEC62Q99442 399 aaKnown RBP19.16■□□□□ 0.66
LMX1B-204ENST00000561065 GNL3Q9BVP2 549 aaKnown RBP eCLIP19.16■□□□□ 0.66
LMX1B-204ENST00000561065 RABGAP1Q9Y3P9 1069 aa19.16■□□□□ 0.66
LMX1B-204ENST00000561065 MYH4Q9Y623 1939 aa19.16■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms