RNA–Protein interactions for RNA: ENST00000560658.5

TRPM1-211, Transcript of transient receptor potential cation channel subfamily M member 1, humanhuman

TSL 2

Gene TRPM1, Length 1,649 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPM1-211ENST00000560658 FILIP1LQ4L180 1135 aa20.16■□□□□ 0.82
TRPM1-211ENST00000560658 IFIT1BQ5T764 474 aaKnown RBP20.16■□□□□ 0.82
TRPM1-211ENST00000560658 CSRNP2Q9H175 543 aa20.16■□□□□ 0.82
TRPM1-211ENST00000560658 ORC4O43929 436 aa20.16■□□□□ 0.82
TRPM1-211ENST00000560658 ANKRD18AQ8IVF6 992 aa20.16■□□□□ 0.82
TRPM1-211ENST00000560658 FAM177A1Q8N128 213 aaPredicted RBP20.16■□□□□ 0.82
TRPM1-211ENST00000560658 RIOK1Q9BRS2 568 aaKnown RBP20.16■□□□□ 0.82
TRPM1-211ENST00000560658 INTS13Q9NVM9 706 aa20.16■□□□□ 0.82
TRPM1-211ENST00000560658 BSDC1Q9NW68 430 aaPredicted RBP20.16■□□□□ 0.82
TRPM1-211ENST00000560658 NIP7Q9Y221 180 aaKnown RBP eCLIP20.16■□□□□ 0.82
TRPM1-211ENST00000560658 CASQ1P31415 396 aa20.15■□□□□ 0.82
TRPM1-211ENST00000560658 ATP6V1AP38606 617 aa20.15■□□□□ 0.82
TRPM1-211ENST00000560658 SPAG1Q07617 926 aa20.15■□□□□ 0.82
TRPM1-211ENST00000560658 FUT2Q10981 343 aa20.15■□□□□ 0.82
TRPM1-211ENST00000560658 NR5A1Q13285 461 aa20.15■□□□□ 0.82
TRPM1-211ENST00000560658 TC2NQ8N9U0 490 aa20.15■□□□□ 0.82
TRPM1-211ENST00000560658 ZKSCAN3Q9BRR0 538 aa20.15■□□□□ 0.82
TRPM1-211ENST00000560658 ZNF831Q5JPB2 1677 aa20.15■□□□□ 0.82
TRPM1-211ENST00000560658 ITIH6Q6UXX5 1313 aa20.14■□□□□ 0.82
TRPM1-211ENST00000560658 DLEC1Q9Y238 1755 aa20.14■□□□□ 0.82
TRPM1-211ENST00000560658 TMEM232C9JQI7 657 aa20.14■□□□□ 0.81
TRPM1-211ENST00000560658 AKR1B15C9JRZ8 316 aaPredicted RBP20.14■□□□□ 0.81
TRPM1-211ENST00000560658 GTF2E1P29083 439 aaPredicted RBP20.14■□□□□ 0.81
TRPM1-211ENST00000560658 TAF3Q5VWG9 929 aa20.14■□□□□ 0.81
TRPM1-211ENST00000560658 MIGA1Q8NAN2 632 aa20.14■□□□□ 0.81
TRPM1-211ENST00000560658 PRDM10Q9NQV6 1147 aa20.14■□□□□ 0.81
TRPM1-211ENST00000560658 LOC102724428A0A0B4J2F2 783 aa20.13■□□□□ 0.81
TRPM1-211ENST00000560658 VWA3AA6NCI4 1184 aa20.13■□□□□ 0.81
TRPM1-211ENST00000560658 MINDY4BA8MYZ0 360 aa20.13■□□□□ 0.81
TRPM1-211ENST00000560658 SIK1P57059 783 aa20.13■□□□□ 0.81
TRPM1-211ENST00000560658 FMR1Q06787 632 aaKnown RBP eCLIP20.13■□□□□ 0.81
TRPM1-211ENST00000560658 PKN1Q16512 942 aa20.13■□□□□ 0.81
TRPM1-211ENST00000560658 JAKMIP3Q5VZ66 844 aa20.13■□□□□ 0.81
TRPM1-211ENST00000560658 TMTC3Q6ZXV5 915 aa20.13■□□□□ 0.81
TRPM1-211ENST00000560658 PPFIBP1Q86W92 1011 aa20.13■□□□□ 0.81
TRPM1-211ENST00000560658 ENAHQ8N8S7 591 aaPredicted RBP20.13■□□□□ 0.81
TRPM1-211ENST00000560658 FOXN1O15353 648 aa20.13■□□□□ 0.81
TRPM1-211ENST00000560658 TADA3O75528 432 aa20.13■□□□□ 0.81
TRPM1-211ENST00000560658 PRR29P0C7W0 189 aa20.13■□□□□ 0.81
TRPM1-211ENST00000560658 ERCC6LQ2NKX8 1250 aa20.13■□□□□ 0.81
TRPM1-211ENST00000560658 CCDC178Q5BJE1 867 aa20.13■□□□□ 0.81
TRPM1-211ENST00000560658 CTCFLQ8NI51 663 aaPredicted RBP20.13■□□□□ 0.81
TRPM1-211ENST00000560658 PAGE5Q96GU1 130 aa20.13■□□□□ 0.81
TRPM1-211ENST00000560658 RMND1Q9NWS8 449 aa20.13■□□□□ 0.81
TRPM1-211ENST00000560658 AHDC1Q5TGY3 1603 aaPredicted RBP20.12■□□□□ 0.81
TRPM1-211ENST00000560658 SYNRGQ9UMZ2 1314 aa20.12■□□□□ 0.81
TRPM1-211ENST00000560658 URI1O94763 535 aaPredicted RBP20.12■□□□□ 0.81
TRPM1-211ENST00000560658 CCDC175P0C221 793 aa20.12■□□□□ 0.81
TRPM1-211ENST00000560658 CALML3P27482 149 aa20.12■□□□□ 0.81
TRPM1-211ENST00000560658 MAP3K9P80192 1104 aa20.12■□□□□ 0.81
TRPM1-211ENST00000560658 ATP2C1P98194 919 aaPredicted RBP20.12■□□□□ 0.81
TRPM1-211ENST00000560658 TROAPQ12815 778 aa20.12■□□□□ 0.81
TRPM1-211ENST00000560658 TRIM14Q14142 442 aa20.12■□□□□ 0.81
TRPM1-211ENST00000560658 ARHGAP29Q52LW3 1261 aa20.12■□□□□ 0.81
TRPM1-211ENST00000560658 SPECC1Q5M775 1068 aa20.12■□□□□ 0.81
TRPM1-211ENST00000560658 CDKAL1Q5VV42 579 aa20.12■□□□□ 0.81
TRPM1-211ENST00000560658 TMCO3Q6UWJ1 677 aa20.12■□□□□ 0.81
TRPM1-211ENST00000560658 PDILTQ8N807 584 aa20.12■□□□□ 0.81
TRPM1-211ENST00000560658 IQUBQ8NA54 791 aa20.12■□□□□ 0.81
TRPM1-211ENST00000560658 ANKRD20A12PQ8NF67 263 aa20.12■□□□□ 0.81
TRPM1-211ENST00000560658 OXER1Q8TDS5 423 aa20.12■□□□□ 0.81
TRPM1-211ENST00000560658 ATP8A2Q9NTI2 1148 aa20.12■□□□□ 0.81
TRPM1-211ENST00000560658 PARP3Q9Y6F1 533 aa20.12■□□□□ 0.81
TRPM1-211ENST00000560658 COL16A1Q07092 1604 aaPredicted RBP20.11■□□□□ 0.81
TRPM1-211ENST00000560658 UBE2Q2LH0YL09 131 aa20.11■□□□□ 0.81
TRPM1-211ENST00000560658 GRIN1Q05586 938 aa20.11■□□□□ 0.81
TRPM1-211ENST00000560658 DPYDQ12882 1025 aa20.11■□□□□ 0.81
TRPM1-211ENST00000560658 CUL4BQ13620 913 aa20.11■□□□□ 0.81
TRPM1-211ENST00000560658 DDB1Q16531 1140 aa20.11■□□□□ 0.81
TRPM1-211ENST00000560658 SBK1Q52WX2 424 aa20.11■□□□□ 0.81
TRPM1-211ENST00000560658 TTC38Q5R3I4 469 aa20.11■□□□□ 0.81
TRPM1-211ENST00000560658 ARL6IP4Q66PJ3 421 aaKnown RBP20.11■□□□□ 0.81
TRPM1-211ENST00000560658 CNGA4Q8IV77 575 aa20.11■□□□□ 0.81
TRPM1-211ENST00000560658 GPR161Q8N6U8 529 aaKnown RBP20.11■□□□□ 0.81
TRPM1-211ENST00000560658 TNFRSF25Q93038 417 aa20.11■□□□□ 0.81
TRPM1-211ENST00000560658 SH3GLB2Q9NR46 395 aa20.11■□□□□ 0.81
TRPM1-211ENST00000560658 DDX52Q9Y2R4 599 aaKnown RBP eCLIP20.11■□□□□ 0.81
TRPM1-211ENST00000560658 KIF5BP33176 963 aa20.1■□□□□ 0.81
TRPM1-211ENST00000560658 SLC10A5Q5PT55 438 aa20.1■□□□□ 0.81
TRPM1-211ENST00000560658 DHX58Q96C10 678 aa20.1■□□□□ 0.81
TRPM1-211ENST00000560658 CRNKL1Q9BZJ0 848 aaKnown RBP20.1■□□□□ 0.81
TRPM1-211ENST00000560658 ARPP21Q9UBL0 812 aaPredicted RBP20.1■□□□□ 0.81
TRPM1-211ENST00000560658 ABCF2Q9UG63 623 aa20.1■□□□□ 0.81
TRPM1-211ENST00000560658 FECHP22830 423 aa20.09■□□□□ 0.81
TRPM1-211ENST00000560658 PBX1P40424 430 aa20.09■□□□□ 0.81
TRPM1-211ENST00000560658 SDR42E1Q8WUS8 393 aa20.09■□□□□ 0.81
TRPM1-211ENST00000560658 SYMPKQ92797 1274 aaKnown RBP20.09■□□□□ 0.81
TRPM1-211ENST00000560658 ANKRD2Q9GZV1 360 aa20.09■□□□□ 0.81
TRPM1-211ENST00000560658 VPS54Q9P1Q0 977 aa20.09■□□□□ 0.81
TRPM1-211ENST00000560658 NOL12Q9UGY1 213 aaKnown RBP eCLIP20.09■□□□□ 0.81
TRPM1-211ENST00000560658 V9GYY5 206 aaPredicted RBP20.09■□□□□ 0.81
TRPM1-211ENST00000560658 CACNA1SQ13698 1873 aa20.09■□□□□ 0.81
TRPM1-211ENST00000560658 GNG11P61952 73 aa20.09■□□□□ 0.81
TRPM1-211ENST00000560658 POTEAQ6S8J7 498 aa20.09■□□□□ 0.81
TRPM1-211ENST00000560658 FBXO33Q7Z6M2 555 aa20.09■□□□□ 0.81
TRPM1-211ENST00000560658 CCDC82Q8N4S0 544 aa20.09■□□□□ 0.81
TRPM1-211ENST00000560658 ADD3Q9UEY8 706 aaKnown RBP20.09■□□□□ 0.81
TRPM1-211ENST00000560658 V9GY48 417 aaPredicted RBP20.09■□□□□ 0.81
TRPM1-211ENST00000560658 SCN7AQ01118 1682 aa20.09■□□□□ 0.81
TRPM1-211ENST00000560658 SPATA31A1Q5TZJ5 1347 aa20.08■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms