RNA–Protein interactions for RNA: ENST00000560619.2

SNRPCP18-201, Transcript of small nuclear ribonucleoprotein polypeptide C pseudogene 18, humanhuman

BASIC

Gene SNRPCP18, Length 439 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPCP18-201ENST00000560619 TCP11L1Q9NUJ3 509 aa13.21□□□□□ -0.29
SNRPCP18-201ENST00000560619 IGKV6D-41A0A0C4DH26 115 aa13.2□□□□□ -0.3
SNRPCP18-201ENST00000560619 AKR1B1P15121 316 aa13.2□□□□□ -0.3
SNRPCP18-201ENST00000560619 NOVP48745 357 aa13.2□□□□□ -0.3
SNRPCP18-201ENST00000560619 PABPC4Q13310 644 aaKnown RBP eCLIP13.2□□□□□ -0.3
SNRPCP18-201ENST00000560619 MOGSQ13724 837 aa13.2□□□□□ -0.3
SNRPCP18-201ENST00000560619 RAB3GAP1Q15042 981 aa13.2□□□□□ -0.3
SNRPCP18-201ENST00000560619 CCDC178Q5BJE1 867 aa13.2□□□□□ -0.3
SNRPCP18-201ENST00000560619 USP17L2Q6R6M4 530 aa13.2□□□□□ -0.3
SNRPCP18-201ENST00000560619 BRI3BPQ8WY22 251 aa13.2□□□□□ -0.3
SNRPCP18-201ENST00000560619 MKL1Q969V6 931 aa13.2□□□□□ -0.3
SNRPCP18-201ENST00000560619 LSG1Q9H089 658 aaKnown RBP13.2□□□□□ -0.3
SNRPCP18-201ENST00000560619 CNNM2Q9H8M5 875 aa13.2□□□□□ -0.3
SNRPCP18-201ENST00000560619 ARHGEF10LQ9HCE6 1279 aa13.2□□□□□ -0.3
SNRPCP18-201ENST00000560619 NYAP2Q9P242 653 aa13.2□□□□□ -0.3
SNRPCP18-201ENST00000560619 CEP350Q5VT06 3117 aa13.2□□□□□ -0.3
SNRPCP18-201ENST00000560619 SMIM22K7EJ46 135 aa13.19□□□□□ -0.3
SNRPCP18-201ENST00000560619 MPHOSPH10O00566 681 aaKnown RBP13.19□□□□□ -0.3
SNRPCP18-201ENST00000560619 REC8O95072 547 aa13.19□□□□□ -0.3
SNRPCP18-201ENST00000560619 TSPY3P0CV98 308 aa13.19□□□□□ -0.3
SNRPCP18-201ENST00000560619 TSPY8P0CW00 308 aa13.19□□□□□ -0.3
SNRPCP18-201ENST00000560619 HOXA7P31268 230 aaPredicted RBP13.19□□□□□ -0.3
SNRPCP18-201ENST00000560619 PTH1RQ03431 593 aa13.19□□□□□ -0.3
SNRPCP18-201ENST00000560619 SEPT2Q15019 361 aa13.19□□□□□ -0.3
SNRPCP18-201ENST00000560619 LPAR1Q92633 364 aa13.19□□□□□ -0.3
SNRPCP18-201ENST00000560619 TTC14Q96N46 770 aa13.19□□□□□ -0.3
SNRPCP18-201ENST00000560619 PTPN18Q99952 460 aa13.19□□□□□ -0.3
SNRPCP18-201ENST00000560619 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.19□□□□□ -0.3
SNRPCP18-201ENST00000560619 KRT23Q9C075 422 aa13.19□□□□□ -0.3
SNRPCP18-201ENST00000560619 UPF2Q9HAU5 1272 aaKnown RBP13.19□□□□□ -0.3
SNRPCP18-201ENST00000560619 RNF186Q9NXI6 227 aa13.19□□□□□ -0.3
SNRPCP18-201ENST00000560619 AGTPBP1Q9UPW5 1226 aa13.19□□□□□ -0.3
SNRPCP18-201ENST00000560619 TMX2Q9Y320 296 aa13.19□□□□□ -0.3
SNRPCP18-201ENST00000560619 LOC285556D6RIA3 1793 aa13.19□□□□□ -0.3
SNRPCP18-201ENST00000560619 TRIM75PA6NK02 468 aa13.18□□□□□ -0.3
SNRPCP18-201ENST00000560619 IGF2BP3O00425 579 aaKnown RBP eCLIP13.18□□□□□ -0.3
SNRPCP18-201ENST00000560619 TFAP4Q01664 338 aa13.18□□□□□ -0.3
SNRPCP18-201ENST00000560619 ICA1Q05084 483 aa13.18□□□□□ -0.3
SNRPCP18-201ENST00000560619 CTDSPL2Q05D32 466 aa13.18□□□□□ -0.3
SNRPCP18-201ENST00000560619 MKRN3Q13064 507 aaKnown RBP13.18□□□□□ -0.3
SNRPCP18-201ENST00000560619 NECTIN1Q15223 517 aa13.18□□□□□ -0.3
SNRPCP18-201ENST00000560619 TSGA10IPQ3SY00 556 aa13.18□□□□□ -0.3
SNRPCP18-201ENST00000560619 RNF20Q5VTR2 975 aa13.18□□□□□ -0.3
SNRPCP18-201ENST00000560619 SIAH1Q8IUQ4 282 aa13.18□□□□□ -0.3
SNRPCP18-201ENST00000560619 ESR2Q92731 530 aa13.18□□□□□ -0.3
SNRPCP18-201ENST00000560619 MTA3Q9BTC8 594 aa13.18□□□□□ -0.3
SNRPCP18-201ENST00000560619 NBPF3Q9H094 633 aa13.18□□□□□ -0.3
SNRPCP18-201ENST00000560619 MTMR4Q9NYA4 1195 aa13.18□□□□□ -0.3
SNRPCP18-201ENST00000560619 TMOD4Q9NZQ9 345 aa13.18□□□□□ -0.3
SNRPCP18-201ENST00000560619 TSPY2A6NKD2 308 aa13.17□□□□□ -0.3
SNRPCP18-201ENST00000560619 BTBD19C9JJ37 291 aa13.17□□□□□ -0.3
SNRPCP18-201ENST00000560619 TTLL1O95922 423 aa13.17□□□□□ -0.3
SNRPCP18-201ENST00000560619 CYP21A2P08686 494 aa13.17□□□□□ -0.3
SNRPCP18-201ENST00000560619 GPAT2Q6NUI2 795 aa13.17□□□□□ -0.3
SNRPCP18-201ENST00000560619 ZFYVE28Q9HCC9 887 aa13.17□□□□□ -0.3
SNRPCP18-201ENST00000560619 PNMA3Q9UL41 463 aa13.17□□□□□ -0.3
SNRPCP18-201ENST00000560619 RBM8AQ9Y5S9 174 aaKnown RBP13.17□□□□□ -0.3
SNRPCP18-201ENST00000560619 RANBP6O60518 1105 aaKnown RBP13.16□□□□□ -0.3
SNRPCP18-201ENST00000560619 PRDM1O75626 825 aa13.16□□□□□ -0.3
SNRPCP18-201ENST00000560619 HSPA1AP0DMV8 641 aaKnown RBP13.16□□□□□ -0.3
SNRPCP18-201ENST00000560619 HSPA1BP0DMV9 641 aaKnown RBP13.16□□□□□ -0.3
SNRPCP18-201ENST00000560619 EEF2P13639 858 aaKnown RBP13.16□□□□□ -0.3
SNRPCP18-201ENST00000560619 CTCFP49711 727 aaPredicted RBP13.16□□□□□ -0.3
SNRPCP18-201ENST00000560619 HMGCS2P54868 508 aa13.16□□□□□ -0.3
SNRPCP18-201ENST00000560619 HAND2P61296 217 aa13.16□□□□□ -0.3
SNRPCP18-201ENST00000560619 TRDNQ13061 729 aa13.16□□□□□ -0.3
SNRPCP18-201ENST00000560619 MTMR2Q13614 643 aa13.16□□□□□ -0.3
SNRPCP18-201ENST00000560619 SHROOM1Q2M3G4 852 aaPredicted RBP13.16□□□□□ -0.3
SNRPCP18-201ENST00000560619 DGKHQ86XP1 1220 aa13.16□□□□□ -0.3
SNRPCP18-201ENST00000560619 TBC1D10CQ8IV04 446 aa13.16□□□□□ -0.3
SNRPCP18-201ENST00000560619 FAM43AQ8N2R8 423 aa13.16□□□□□ -0.3
SNRPCP18-201ENST00000560619 GTF3C2Q8WUA4 911 aaPredicted RBP13.16□□□□□ -0.3
SNRPCP18-201ENST00000560619 ANKS1AQ92625 1134 aa13.16□□□□□ -0.3
SNRPCP18-201ENST00000560619 PARK7Q99497 189 aaKnown RBP13.16□□□□□ -0.3
SNRPCP18-201ENST00000560619 VCPKMTQ9H867 229 aa13.16□□□□□ -0.3
SNRPCP18-201ENST00000560619 ANO2Q9NQ90 1003 aa13.16□□□□□ -0.3
SNRPCP18-201ENST00000560619 EMILIN3Q9NT22 766 aa13.16□□□□□ -0.3
SNRPCP18-201ENST00000560619 TACC3Q9Y6A5 838 aa13.16□□□□□ -0.3
SNRPCP18-201ENST00000560619 A0A1W2PRG0 241 aa13.15□□□□□ -0.3
SNRPCP18-201ENST00000560619 PDHXO00330 501 aa13.15□□□□□ -0.3
SNRPCP18-201ENST00000560619 TLR2O60603 784 aa13.15□□□□□ -0.3
SNRPCP18-201ENST00000560619 TRPA1O75762 1119 aa13.15□□□□□ -0.3
SNRPCP18-201ENST00000560619 SEC24BO95487 1268 aa13.15□□□□□ -0.3
SNRPCP18-201ENST00000560619 OSBPP22059 807 aa13.15□□□□□ -0.3
SNRPCP18-201ENST00000560619 CCDC84Q86UT8 332 aaPredicted RBP13.15□□□□□ -0.3
SNRPCP18-201ENST00000560619 IQCA1Q86XH1 822 aa13.15□□□□□ -0.3
SNRPCP18-201ENST00000560619 GMCL1P1Q8NEA9 526 aa13.15□□□□□ -0.3
SNRPCP18-201ENST00000560619 ACER1Q8TDN7 264 aa13.15□□□□□ -0.3
SNRPCP18-201ENST00000560619 KCNB2Q92953 911 aa13.15□□□□□ -0.3
SNRPCP18-201ENST00000560619 CEP95Q96GE4 821 aa13.15□□□□□ -0.3
SNRPCP18-201ENST00000560619 FEZ1Q99689 392 aa13.15□□□□□ -0.3
SNRPCP18-201ENST00000560619 GOPCQ9HD26 462 aa13.15□□□□□ -0.3
SNRPCP18-201ENST00000560619 IL17RBQ9NRM6 502 aa13.15□□□□□ -0.3
SNRPCP18-201ENST00000560619 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.15□□□□□ -0.3
SNRPCP18-201ENST00000560619 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.15□□□□□ -0.3
SNRPCP18-201ENST00000560619 MYH4Q9Y623 1939 aa13.14□□□□□ -0.31
SNRPCP18-201ENST00000560619 USP17L15C9J2P7 530 aa13.14□□□□□ -0.31
SNRPCP18-201ENST00000560619 USP17L13C9JLJ4 530 aa13.14□□□□□ -0.31
SNRPCP18-201ENST00000560619 USP17L11C9JVI0 530 aa13.14□□□□□ -0.31
SNRPCP18-201ENST00000560619 USP17L18D6R9N7 530 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms