RNA–Protein interactions for RNA: ENST00000560565.1

CCDC33-209, Transcript of coiled-coil domain containing 33, humanhuman

TSL 1 (best)

Gene CCDC33, Length 1,275 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC33-209ENST00000560565 ARID4AP29374 1257 aaPredicted RBP9.78□□□□□ -0.84
CCDC33-209ENST00000560565 EPS15P42566 896 aa9.78□□□□□ -0.84
CCDC33-209ENST00000560565 SCNN1DP51172 638 aa9.78□□□□□ -0.84
CCDC33-209ENST00000560565 CHRNDQ07001 517 aa9.78□□□□□ -0.84
CCDC33-209ENST00000560565 STK38Q15208 465 aa9.78□□□□□ -0.84
CCDC33-209ENST00000560565 TTF1Q15361 905 aaPredicted RBP9.78□□□□□ -0.84
CCDC33-209ENST00000560565 DHX40Q8IX18 779 aaKnown RBP9.78□□□□□ -0.84
CCDC33-209ENST00000560565 CEP112Q8N8E3 955 aa9.78□□□□□ -0.84
CCDC33-209ENST00000560565 KBTBD3Q8NAB2 608 aa9.78□□□□□ -0.84
CCDC33-209ENST00000560565 RABGGTAQ92696 567 aa9.78□□□□□ -0.84
CCDC33-209ENST00000560565 GOLGA1Q92805 767 aa9.78□□□□□ -0.84
CCDC33-209ENST00000560565 PGBD1Q96JS3 809 aa9.78□□□□□ -0.84
CCDC33-209ENST00000560565 PAG1Q9NWQ8 432 aa9.78□□□□□ -0.84
CCDC33-209ENST00000560565 NRBP1Q9UHY1 535 aa9.78□□□□□ -0.84
CCDC33-209ENST00000560565 CCDC151A5D8V7 595 aa9.77□□□□□ -0.85
CCDC33-209ENST00000560565 SEMA3EO15041 775 aa9.77□□□□□ -0.85
CCDC33-209ENST00000560565 STX10O60499 249 aa9.77□□□□□ -0.85
CCDC33-209ENST00000560565 TAF5LO75529 589 aa9.77□□□□□ -0.85
CCDC33-209ENST00000560565 PNMA6AP0CW24 399 aaPredicted RBP9.77□□□□□ -0.85
CCDC33-209ENST00000560565 CASQ1P31415 396 aa9.77□□□□□ -0.85
CCDC33-209ENST00000560565 GMPSP49915 693 aaPredicted RBP9.77□□□□□ -0.85
CCDC33-209ENST00000560565 CCDC144BQ3MJ40 725 aa9.77□□□□□ -0.85
CCDC33-209ENST00000560565 TMED8Q6PL24 325 aaPredicted RBP9.77□□□□□ -0.85
CCDC33-209ENST00000560565 CCDC144CPQ8IYA2 1237 aa9.77□□□□□ -0.85
CCDC33-209ENST00000560565 AOPEPQ8N6M6 819 aa9.77□□□□□ -0.85
CCDC33-209ENST00000560565 ENGASEQ8NFI3 743 aa9.77□□□□□ -0.85
CCDC33-209ENST00000560565 AGXT2Q9BYV1 514 aa9.77□□□□□ -0.85
CCDC33-209ENST00000560565 IL25Q9H293 177 aa9.77□□□□□ -0.85
CCDC33-209ENST00000560565 RASSF4Q9H2L5 321 aa9.77□□□□□ -0.85
CCDC33-209ENST00000560565 KCNQ5Q9NR82 932 aa9.77□□□□□ -0.85
CCDC33-209ENST00000560565 GNL3LQ9NVN8 582 aaKnown RBP9.77□□□□□ -0.85
CCDC33-209ENST00000560565 GPRC5DQ9NZD1 345 aa9.77□□□□□ -0.85
CCDC33-209ENST00000560565 TFIP11Q9UBB9 837 aaKnown RBP9.77□□□□□ -0.85
CCDC33-209ENST00000560565 ORC3Q9UBD5 711 aaPredicted RBP9.77□□□□□ -0.85
CCDC33-209ENST00000560565 MKRN1Q9UHC7 482 aaKnown RBP9.77□□□□□ -0.85
CCDC33-209ENST00000560565 LEMD3Q9Y2U8 911 aa9.77□□□□□ -0.85
CCDC33-209ENST00000560565 PDS5AQ29RF7 1337 aaKnown RBP9.77□□□□□ -0.85
CCDC33-209ENST00000560565 PSME4Q14997 1843 aa9.77□□□□□ -0.85
CCDC33-209ENST00000560565 MYH2Q9UKX2 1941 aa9.76□□□□□ -0.85
CCDC33-209ENST00000560565 A0A0U1RQG5 324 aaPredicted RBP9.76□□□□□ -0.85
CCDC33-209ENST00000560565 PTPDC1A2A3K4 754 aa9.76□□□□□ -0.85
CCDC33-209ENST00000560565 WTIPA6NIX2 430 aaPredicted RBP9.76□□□□□ -0.85
CCDC33-209ENST00000560565 PSMD14O00487 310 aa9.76□□□□□ -0.85
CCDC33-209ENST00000560565 ZRANB2O95218 330 aaKnown RBP eCLIP9.76□□□□□ -0.85
CCDC33-209ENST00000560565 TOP1P11387 765 aaKnown RBP9.76□□□□□ -0.85
CCDC33-209ENST00000560565 CMA1P23946 247 aa9.76□□□□□ -0.85
CCDC33-209ENST00000560565 CLCN6P51797 869 aa9.76□□□□□ -0.85
CCDC33-209ENST00000560565 MYL5Q02045 173 aa9.76□□□□□ -0.85
CCDC33-209ENST00000560565 ST3GAL1Q11201 340 aa9.76□□□□□ -0.85
CCDC33-209ENST00000560565 TPRNQ4KMQ1 711 aa9.76□□□□□ -0.85
CCDC33-209ENST00000560565 HSP90B2PQ58FF3 399 aa9.76□□□□□ -0.85
CCDC33-209ENST00000560565 CCDC102BQ68D86 513 aa9.76□□□□□ -0.85
CCDC33-209ENST00000560565 KANK3Q6NY19 840 aa9.76□□□□□ -0.85
CCDC33-209ENST00000560565 Q6ZUG5 572 aa9.76□□□□□ -0.85
CCDC33-209ENST00000560565 USP50Q70EL3 339 aaPredicted RBP9.76□□□□□ -0.85
CCDC33-209ENST00000560565 TMC6Q7Z403 805 aa9.76□□□□□ -0.85
CCDC33-209ENST00000560565 PODNQ7Z5L7 613 aa9.76□□□□□ -0.85
CCDC33-209ENST00000560565 FMR1NBQ8N0W7 255 aaPredicted RBP9.76□□□□□ -0.85
CCDC33-209ENST00000560565 IQUBQ8NA54 791 aa9.76□□□□□ -0.85
CCDC33-209ENST00000560565 HNRNPLLQ8WVV9 542 aaKnown RBP9.76□□□□□ -0.85
CCDC33-209ENST00000560565 AIDAQ96BJ3 306 aa9.76□□□□□ -0.85
CCDC33-209ENST00000560565 ADARB2Q9NS39 739 aaKnown RBP9.76□□□□□ -0.85
CCDC33-209ENST00000560565 ZKSCAN7Q9P0L1 754 aaPredicted RBP9.76□□□□□ -0.85
CCDC33-209ENST00000560565 CNOT7Q9UIV1 285 aaKnown RBP9.76□□□□□ -0.85
CCDC33-209ENST00000560565 ZNF804BA4D1E1 1349 aa9.76□□□□□ -0.85
CCDC33-209ENST00000560565 SCN9AQ15858 1988 aa9.75□□□□□ -0.85
CCDC33-209ENST00000560565 A6NNZ2 444 aa9.75□□□□□ -0.85
CCDC33-209ENST00000560565 H7C1D1 291 aa9.75□□□□□ -0.85
CCDC33-209ENST00000560565 SERPINC1P01008 464 aa9.75□□□□□ -0.85
CCDC33-209ENST00000560565 HSPA8P11142 646 aaKnown RBP9.75□□□□□ -0.85
CCDC33-209ENST00000560565 ADORA1P30542 326 aa9.75□□□□□ -0.85
CCDC33-209ENST00000560565 FXR1P51114 621 aaKnown RBP eCLIP9.75□□□□□ -0.85
CCDC33-209ENST00000560565 EVCP57679 992 aa9.75□□□□□ -0.85
CCDC33-209ENST00000560565 IRX5P78411 483 aaPredicted RBP9.75□□□□□ -0.85
CCDC33-209ENST00000560565 TUBB8Q3ZCM7 444 aa9.75□□□□□ -0.85
CCDC33-209ENST00000560565 CAVIN4Q5BKX8 364 aa9.75□□□□□ -0.85
CCDC33-209ENST00000560565 SYT10Q6XYQ8 523 aa9.75□□□□□ -0.85
CCDC33-209ENST00000560565 C11orf57Q6ZUT1 292 aaPredicted RBP9.75□□□□□ -0.85
CCDC33-209ENST00000560565 C15orf52Q6ZUT6 534 aaKnown RBP9.75□□□□□ -0.85
CCDC33-209ENST00000560565 TRIML1Q8N9V2 468 aa9.75□□□□□ -0.85
CCDC33-209ENST00000560565 HELBQ8NG08 1087 aaPredicted RBP9.75□□□□□ -0.85
CCDC33-209ENST00000560565 DPF2Q92785 391 aa9.75□□□□□ -0.85
CCDC33-209ENST00000560565 DDX24Q9GZR7 859 aaKnown RBP eCLIP9.75□□□□□ -0.85
CCDC33-209ENST00000560565 TMEM51Q9NW97 253 aa9.75□□□□□ -0.85
CCDC33-209ENST00000560565 ZBTB12Q9Y330 459 aaPredicted RBP9.75□□□□□ -0.85
CCDC33-209ENST00000560565 FHOD1Q9Y613 1164 aa9.75□□□□□ -0.85
CCDC33-209ENST00000560565 SPTLC2O15270 562 aa9.74□□□□□ -0.85
CCDC33-209ENST00000560565 PPP6R2O75170 966 aa9.74□□□□□ -0.85
CCDC33-209ENST00000560565 TADA3O75528 432 aa9.74□□□□□ -0.85
CCDC33-209ENST00000560565 VIL1P09327 827 aaKnown RBP9.74□□□□□ -0.85
CCDC33-209ENST00000560565 CPA1P15085 419 aa9.74□□□□□ -0.85
CCDC33-209ENST00000560565 RPS12P25398 132 aaKnown RBP9.74□□□□□ -0.85
CCDC33-209ENST00000560565 UBASH3AP57075 661 aa9.74□□□□□ -0.85
CCDC33-209ENST00000560565 MAP9Q49MG5 647 aa9.74□□□□□ -0.85
CCDC33-209ENST00000560565 MAP1SQ66K74 1059 aaPredicted RBP9.74□□□□□ -0.85
CCDC33-209ENST00000560565 E4F1Q66K89 784 aaPredicted RBP9.74□□□□□ -0.85
CCDC33-209ENST00000560565 HDXQ7Z353 690 aa9.74□□□□□ -0.85
CCDC33-209ENST00000560565 MICALL2Q8IY33 904 aa9.74□□□□□ -0.85
CCDC33-209ENST00000560565 NSUN7Q8NE18 718 aaKnown RBP9.74□□□□□ -0.85
CCDC33-209ENST00000560565 WASF1Q92558 559 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms