RNA–Protein interactions for RNA: ENST00000560320.1

CRTC3-209, Transcript of CREB regulated transcription coactivator 3, humanhuman

TSL 4

Gene CRTC3, Length 554 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRTC3-209ENST00000560320 SENP2Q9HC62 589 aa12.36□□□□□ -0.43
CRTC3-209ENST00000560320 DDX4Q9NQI0 724 aaKnown RBP12.36□□□□□ -0.43
CRTC3-209ENST00000560320 SBF1O95248 1867 aa12.36□□□□□ -0.43
CRTC3-209ENST00000560320 STK36Q9NRP7 1315 aa12.36□□□□□ -0.43
CRTC3-209ENST00000560320 COL2A1P02458 1487 aaPredicted RBP12.35□□□□□ -0.43
CRTC3-209ENST00000560320 SPDYE2BA6NHP3 402 aa12.35□□□□□ -0.43
CRTC3-209ENST00000560320 SPDYE6P0CI01 402 aa12.35□□□□□ -0.43
CRTC3-209ENST00000560320 IFNAR1P17181 557 aa12.35□□□□□ -0.43
CRTC3-209ENST00000560320 RXRAP19793 462 aa12.35□□□□□ -0.43
CRTC3-209ENST00000560320 ADD1P35611 737 aaKnown RBP12.35□□□□□ -0.43
CRTC3-209ENST00000560320 CTCFP49711 727 aaPredicted RBP12.35□□□□□ -0.43
CRTC3-209ENST00000560320 TCP10Q12799 353 aa12.35□□□□□ -0.43
CRTC3-209ENST00000560320 ARHGAP27Q6ZUM4 889 aa12.35□□□□□ -0.43
CRTC3-209ENST00000560320 MTMR14Q8NCE2 650 aa12.35□□□□□ -0.43
CRTC3-209ENST00000560320 SLC44A5Q8NCS7 719 aa12.35□□□□□ -0.43
CRTC3-209ENST00000560320 RGS22Q8NE09 1264 aa12.35□□□□□ -0.43
CRTC3-209ENST00000560320 CCDC17Q96LX7 622 aa12.35□□□□□ -0.43
CRTC3-209ENST00000560320 ZSCAN16Q9H4T2 348 aaPredicted RBP12.35□□□□□ -0.43
CRTC3-209ENST00000560320 PI4KBQ9UBF8 816 aa12.35□□□□□ -0.43
CRTC3-209ENST00000560320 ZBTB12Q9Y330 459 aaPredicted RBP12.35□□□□□ -0.43
CRTC3-209ENST00000560320 XBP1P17861 261 aa12.34□□□□□ -0.43
CRTC3-209ENST00000560320 CDC27P30260 824 aa12.34□□□□□ -0.43
CRTC3-209ENST00000560320 TNNI2P48788 182 aa12.34□□□□□ -0.43
CRTC3-209ENST00000560320 GNAQP50148 359 aa12.34□□□□□ -0.43
CRTC3-209ENST00000560320 FOSBP53539 338 aa12.34□□□□□ -0.43
CRTC3-209ENST00000560320 EVX2Q03828 476 aa12.34□□□□□ -0.43
CRTC3-209ENST00000560320 NFIAQ12857 509 aa12.34□□□□□ -0.43
CRTC3-209ENST00000560320 CDC37L1Q7L3B6 337 aa12.34□□□□□ -0.43
CRTC3-209ENST00000560320 FOXP4Q8IVH2 680 aaPredicted RBP12.34□□□□□ -0.43
CRTC3-209ENST00000560320 ANKS1AQ92625 1134 aa12.34□□□□□ -0.43
CRTC3-209ENST00000560320 PRMT6Q96LA8 375 aaPredicted RBP12.34□□□□□ -0.43
CRTC3-209ENST00000560320 MAP3K14Q99558 947 aa12.34□□□□□ -0.43
CRTC3-209ENST00000560320 ALG1Q9BT22 464 aa12.34□□□□□ -0.43
CRTC3-209ENST00000560320 SLC26A6Q9BXS9 759 aa12.34□□□□□ -0.43
CRTC3-209ENST00000560320 ZNF70Q9UC06 446 aaPredicted RBP12.34□□□□□ -0.43
CRTC3-209ENST00000560320 STX8Q9UNK0 236 aa12.34□□□□□ -0.43
CRTC3-209ENST00000560320 GJA3Q9Y6H8 435 aa12.34□□□□□ -0.43
CRTC3-209ENST00000560320 PLIN4Q96Q06 1357 aa12.33□□□□□ -0.44
CRTC3-209ENST00000560320 CCDC85CA6NKD9 419 aa12.33□□□□□ -0.44
CRTC3-209ENST00000560320 NMT2O60551 498 aa12.33□□□□□ -0.44
CRTC3-209ENST00000560320 DTNBO60941 627 aa12.33□□□□□ -0.44
CRTC3-209ENST00000560320 FMNL1O95466 1100 aaPredicted RBP12.33□□□□□ -0.44
CRTC3-209ENST00000560320 CACNB3P54284 484 aa12.33□□□□□ -0.44
CRTC3-209ENST00000560320 KRT85P78386 507 aa12.33□□□□□ -0.44
CRTC3-209ENST00000560320 GABPAQ06546 454 aa12.33□□□□□ -0.44
CRTC3-209ENST00000560320 FKBP1CQ5VVH2 108 aa12.33□□□□□ -0.44
CRTC3-209ENST00000560320 PNMA1Q8ND90 353 aa12.33□□□□□ -0.44
CRTC3-209ENST00000560320 RBM27Q9P2N5 1060 aaKnown RBP12.33□□□□□ -0.44
CRTC3-209ENST00000560320 FAM198AQ9UFP1 575 aa12.33□□□□□ -0.44
CRTC3-209ENST00000560320 PCDHAC2Q9Y5I4 1007 aa12.33□□□□□ -0.44
CRTC3-209ENST00000560320 SIPA1L1O43166 1804 aa12.32□□□□□ -0.44
CRTC3-209ENST00000560320 TCP10L2B9ZVM9 353 aa12.32□□□□□ -0.44
CRTC3-209ENST00000560320 FZD9O00144 591 aa12.32□□□□□ -0.44
CRTC3-209ENST00000560320 MPHOSPH10O00566 681 aaKnown RBP12.32□□□□□ -0.44
CRTC3-209ENST00000560320 DEXIO95424 95 aa12.32□□□□□ -0.44
CRTC3-209ENST00000560320 TOP1P11387 765 aaKnown RBP12.32□□□□□ -0.44
CRTC3-209ENST00000560320 LMNB1P20700 586 aa12.32□□□□□ -0.44
CRTC3-209ENST00000560320 GNL2Q13823 731 aaKnown RBP12.32□□□□□ -0.44
CRTC3-209ENST00000560320 TNFAIP1Q13829 316 aa12.32□□□□□ -0.44
CRTC3-209ENST00000560320 SAFBQ15424 915 aaKnown RBP eCLIP12.32□□□□□ -0.44
CRTC3-209ENST00000560320 FOXD4L6Q3SYB3 417 aaPredicted RBP12.32□□□□□ -0.44
CRTC3-209ENST00000560320 SPDYE2Q495Y8 402 aa12.32□□□□□ -0.44
CRTC3-209ENST00000560320 C9orf131Q5VYM1 1079 aa12.32□□□□□ -0.44
CRTC3-209ENST00000560320 FOXD4L3Q6VB84 417 aaPredicted RBP12.32□□□□□ -0.44
CRTC3-209ENST00000560320 FERMT3Q86UX7 667 aa12.32□□□□□ -0.44
CRTC3-209ENST00000560320 FAM151AQ8WW52 585 aa12.32□□□□□ -0.44
CRTC3-209ENST00000560320 DPF2Q92785 391 aa12.32□□□□□ -0.44
CRTC3-209ENST00000560320 PHKBQ93100 1093 aa12.32□□□□□ -0.44
CRTC3-209ENST00000560320 VEZTQ9HBM0 779 aa12.32□□□□□ -0.44
CRTC3-209ENST00000560320 MYOZ2Q9NPC6 264 aa12.32□□□□□ -0.44
CRTC3-209ENST00000560320 ATRNL1Q5VV63 1379 aa12.31□□□□□ -0.44
CRTC3-209ENST00000560320 GREB1LQ9C091 1923 aaPredicted RBP12.31□□□□□ -0.44
CRTC3-209ENST00000560320 CLRN2A0PK11 232 aa12.31□□□□□ -0.44
CRTC3-209ENST00000560320 H7C1D1 291 aa12.31□□□□□ -0.44
CRTC3-209ENST00000560320 TRAK2O60296 914 aa12.31□□□□□ -0.44
CRTC3-209ENST00000560320 PRPF40AO75400 957 aaKnown RBP12.31□□□□□ -0.44
CRTC3-209ENST00000560320 LBX1P52954 281 aa12.31□□□□□ -0.44
CRTC3-209ENST00000560320 TROAPQ12815 778 aa12.31□□□□□ -0.44
CRTC3-209ENST00000560320 NTRK3Q16288 839 aa12.31□□□□□ -0.44
CRTC3-209ENST00000560320 CERKLQ49MI3 558 aaPredicted RBP12.31□□□□□ -0.44
CRTC3-209ENST00000560320 FAM83AQ86UY5 434 aa12.31□□□□□ -0.44
CRTC3-209ENST00000560320 ZNF396Q96N95 335 aaPredicted RBP12.31□□□□□ -0.44
CRTC3-209ENST00000560320 LZTS2Q9BRK4 669 aa12.31□□□□□ -0.44
CRTC3-209ENST00000560320 RNF26Q9BY78 433 aaPredicted RBP12.31□□□□□ -0.44
CRTC3-209ENST00000560320 CABP5Q9NP86 173 aa12.31□□□□□ -0.44
CRTC3-209ENST00000560320 IL17RBQ9NRM6 502 aa12.31□□□□□ -0.44
CRTC3-209ENST00000560320 FAM217BQ9NTX9 383 aaPredicted RBP12.31□□□□□ -0.44
CRTC3-209ENST00000560320 HERC5Q9UII4 1024 aaKnown RBP12.31□□□□□ -0.44
CRTC3-209ENST00000560320 DDTLA6NHG4 134 aaPredicted RBP12.3□□□□□ -0.44
CRTC3-209ENST00000560320 PPFIA3O75145 1194 aa12.3□□□□□ -0.44
CRTC3-209ENST00000560320 TTLL1O95922 423 aa12.3□□□□□ -0.44
CRTC3-209ENST00000560320 MBD3O95983 291 aa12.3□□□□□ -0.44
CRTC3-209ENST00000560320 FDPSP14324 419 aaKnown RBP12.3□□□□□ -0.44
CRTC3-209ENST00000560320 AKR1B1P15121 316 aa12.3□□□□□ -0.44
CRTC3-209ENST00000560320 SHMT1P34896 483 aa12.3□□□□□ -0.44
CRTC3-209ENST00000560320 GMPSP49915 693 aaPredicted RBP12.3□□□□□ -0.44
CRTC3-209ENST00000560320 ZNF280AP59817 542 aaPredicted RBP12.3□□□□□ -0.44
CRTC3-209ENST00000560320 GUCY1B3Q02153 619 aa12.3□□□□□ -0.44
CRTC3-209ENST00000560320 RESTQ13127 1097 aa12.3□□□□□ -0.44
CRTC3-209ENST00000560320 GRM4Q14833 912 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms