RNA–Protein interactions for RNA: ENST00000560055.5

RPL28-209, Transcript of ribosomal protein L28, humanhuman

TSL 3 BASIC

Gene RPL28, Length 670 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-209ENST00000560055 PDE4BQ07343 736 aa20.02■□□□□ 0.8
RPL28-209ENST00000560055 MCOLN1Q9GZU1 580 aa20.02■□□□□ 0.8
RPL28-209ENST00000560055 NBPF3Q9H094 633 aa20.02■□□□□ 0.8
RPL28-209ENST00000560055 GREB1LQ9C091 1923 aaPredicted RBP20.02■□□□□ 0.79
RPL28-209ENST00000560055 USP17L10C9JJH3 530 aa20.01■□□□□ 0.79
RPL28-209ENST00000560055 CTDSPL2Q05D32 466 aa20.01■□□□□ 0.79
RPL28-209ENST00000560055 MTMR2Q13614 643 aa20.01■□□□□ 0.79
RPL28-209ENST00000560055 SIAH1Q8IUQ4 282 aa20.01■□□□□ 0.79
RPL28-209ENST00000560055 PROCA1Q8NCQ7 364 aaPredicted RBP20.01■□□□□ 0.79
RPL28-209ENST00000560055 ACER1Q8TDN7 264 aa20.01■□□□□ 0.79
RPL28-209ENST00000560055 R3HDMLQ9H3Y0 253 aa20.01■□□□□ 0.79
RPL28-209ENST00000560055 LOC285556D6RIA3 1793 aa20■□□□□ 0.79
RPL28-209ENST00000560055 PLIN4Q96Q06 1357 aa20■□□□□ 0.79
RPL28-209ENST00000560055 C19orf81C9J6K1 198 aa20■□□□□ 0.79
RPL28-209ENST00000560055 PRDM1O75626 825 aa20■□□□□ 0.79
RPL28-209ENST00000560055 HMGCS2P54868 508 aa20■□□□□ 0.79
RPL28-209ENST00000560055 DGKZQ13574 1117 aa20■□□□□ 0.79
RPL28-209ENST00000560055 ESYT1Q9BSJ8 1104 aa20■□□□□ 0.79
RPL28-209ENST00000560055 SLC45A1Q9Y2W3 748 aa20■□□□□ 0.79
RPL28-209ENST00000560055 IGKV6D-41A0A0C4DH26 115 aa19.99■□□□□ 0.79
RPL28-209ENST00000560055 A0A1W2PRG0 241 aa19.99■□□□□ 0.79
RPL28-209ENST00000560055 ORC4O43929 436 aa19.99■□□□□ 0.79
RPL28-209ENST00000560055 TBC1D8O95759 1140 aa19.99■□□□□ 0.79
RPL28-209ENST00000560055 HAND2P61296 217 aa19.99■□□□□ 0.79
RPL28-209ENST00000560055 PTH1RQ03431 593 aa19.99■□□□□ 0.79
RPL28-209ENST00000560055 CRHR2Q13324 411 aa19.99■□□□□ 0.79
RPL28-209ENST00000560055 NOM1Q5C9Z4 860 aaKnown RBP19.99■□□□□ 0.79
RPL28-209ENST00000560055 GADL1Q6ZQY3 521 aa19.99■□□□□ 0.79
RPL28-209ENST00000560055 CLEC10AQ8IUN9 316 aa19.99■□□□□ 0.79
RPL28-209ENST00000560055 TBC1D10CQ8IV04 446 aa19.99■□□□□ 0.79
RPL28-209ENST00000560055 ZNF444Q8N0Y2 327 aaPredicted RBP19.99■□□□□ 0.79
RPL28-209ENST00000560055 C12orf42Q96LP6 360 aa19.99■□□□□ 0.79
RPL28-209ENST00000560055 KIAA1683Q9H0B3 1180 aa19.99■□□□□ 0.79
RPL28-209ENST00000560055 KANSL2Q9H9L4 492 aa19.99■□□□□ 0.79
RPL28-209ENST00000560055 INCENPQ9NQS7 918 aa19.99■□□□□ 0.79
RPL28-209ENST00000560055 AGTPBP1Q9UPW5 1226 aa19.99■□□□□ 0.79
RPL28-209ENST00000560055 LAMA4Q16363 1823 aa19.98■□□□□ 0.79
RPL28-209ENST00000560055 CCDC85CA6NKD9 419 aa19.98■□□□□ 0.79
RPL28-209ENST00000560055 PDHXO00330 501 aa19.98■□□□□ 0.79
RPL28-209ENST00000560055 CDC45O75419 566 aa19.98■□□□□ 0.79
RPL28-209ENST00000560055 PCP11498 1178 aaKnown RBP19.98■□□□□ 0.79
RPL28-209ENST00000560055 ICA1Q05084 483 aa19.98■□□□□ 0.79
RPL28-209ENST00000560055 TREML2Q5T2D2 321 aa19.98■□□□□ 0.79
RPL28-209ENST00000560055 STAG1Q8WVM7 1258 aa19.98■□□□□ 0.79
RPL28-209ENST00000560055 EMILIN3Q9NT22 766 aa19.98■□□□□ 0.79
RPL28-209ENST00000560055 CTNNA3Q9UI47 895 aa19.98■□□□□ 0.79
RPL28-209ENST00000560055 ZNF213O14771 459 aa19.97■□□□□ 0.79
RPL28-209ENST00000560055 USP14P54578 494 aa19.97■□□□□ 0.79
RPL28-209ENST00000560055 TAF1CQ15572 869 aaPredicted RBP19.97■□□□□ 0.79
RPL28-209ENST00000560055 USP17L2Q6R6M4 530 aa19.97■□□□□ 0.79
RPL28-209ENST00000560055 NEDD1Q8NHV4 660 aa19.97■□□□□ 0.79
RPL28-209ENST00000560055 FAM47AQ5JRC9 791 aa19.96■□□□□ 0.79
RPL28-209ENST00000560055 AKNAD1Q5T1N1 836 aa19.96■□□□□ 0.79
RPL28-209ENST00000560055 MAP4K1Q92918 833 aa19.96■□□□□ 0.79
RPL28-209ENST00000560055 FEZ1Q99689 392 aa19.96■□□□□ 0.79
RPL28-209ENST00000560055 LSG1Q9H089 658 aaKnown RBP19.96■□□□□ 0.79
RPL28-209ENST00000560055 ZFYVE28Q9HCC9 887 aa19.96■□□□□ 0.79
RPL28-209ENST00000560055 TMOD4Q9NZQ9 345 aa19.96■□□□□ 0.79
RPL28-209ENST00000560055 TMX2Q9Y320 296 aa19.96■□□□□ 0.79
RPL28-209ENST00000560055 ADGRA2Q96PE1 1338 aa19.96■□□□□ 0.79
RPL28-209ENST00000560055 GPR25O00155 361 aa19.95■□□□□ 0.78
RPL28-209ENST00000560055 EEF2P13639 858 aaKnown RBP19.95■□□□□ 0.78
RPL28-209ENST00000560055 HOXA7P31268 230 aaPredicted RBP19.95■□□□□ 0.78
RPL28-209ENST00000560055 TFAP4Q01664 338 aa19.95■□□□□ 0.78
RPL28-209ENST00000560055 IMMTQ16891 758 aaKnown RBP19.95■□□□□ 0.78
RPL28-209ENST00000560055 ARHGEF10LQ9HCE6 1279 aa19.95■□□□□ 0.78
RPL28-209ENST00000560055 TLR2O60603 784 aa19.94■□□□□ 0.78
RPL28-209ENST00000560055 TSPY3P0CV98 308 aa19.94■□□□□ 0.78
RPL28-209ENST00000560055 TSPY8P0CW00 308 aa19.94■□□□□ 0.78
RPL28-209ENST00000560055 ZYXQ15942 572 aaKnown RBP19.94■□□□□ 0.78
RPL28-209ENST00000560055 NKX2-3Q8TAU0 364 aa19.94■□□□□ 0.78
RPL28-209ENST00000560055 CEP95Q96GE4 821 aa19.94■□□□□ 0.78
RPL28-209ENST00000560055 PARK7Q99497 189 aaKnown RBP19.94■□□□□ 0.78
RPL28-209ENST00000560055 RNF41Q9H4P4 317 aaPredicted RBP19.94■□□□□ 0.78
RPL28-209ENST00000560055 MTMR4Q9NYA4 1195 aa19.94■□□□□ 0.78
RPL28-209ENST00000560055 NYAP2Q9P242 653 aa19.94■□□□□ 0.78
RPL28-209ENST00000560055 U3KPZ7 1027 aaPredicted RBP19.94■□□□□ 0.78
RPL28-209ENST00000560055 HTTP42858 3142 aa19.93■□□□□ 0.78
RPL28-209ENST00000560055 CYP2C8P10632 490 aa19.93■□□□□ 0.78
RPL28-209ENST00000560055 VCAM1P19320 739 aa19.93■□□□□ 0.78
RPL28-209ENST00000560055 NOVP48745 357 aa19.93■□□□□ 0.78
RPL28-209ENST00000560055 NT5C2P49902 561 aa19.93■□□□□ 0.78
RPL28-209ENST00000560055 PABPC4Q13310 644 aaKnown RBP eCLIP19.93■□□□□ 0.786e-10■■■■■ 42.7
RPL28-209ENST00000560055 KIAA1755Q5JYT7 1200 aa19.93■□□□□ 0.78
RPL28-209ENST00000560055 CASC1Q6TDU7 716 aa19.93■□□□□ 0.78
RPL28-209ENST00000560055 MFSD6Q6ZSS7 791 aa19.93■□□□□ 0.78
RPL28-209ENST00000560055 SH2D4AQ9H788 454 aa19.93■□□□□ 0.78
RPL28-209ENST00000560055 NEDD4P46934 1319 aa19.93■□□□□ 0.78
RPL28-209ENST00000560055 TSPY2A6NKD2 308 aa19.92■□□□□ 0.78
RPL28-209ENST00000560055 RANBP6O60518 1105 aaKnown RBP19.92■□□□□ 0.78
RPL28-209ENST00000560055 CYP21A2P08686 494 aa19.92■□□□□ 0.78
RPL28-209ENST00000560055 C17orf99Q6UX52 265 aa19.92■□□□□ 0.78
RPL28-209ENST00000560055 KIAA1211Q6ZU35 1233 aa19.92■□□□□ 0.78
RPL28-209ENST00000560055 ZNF296Q8WUU4 475 aaPredicted RBP19.92■□□□□ 0.78
RPL28-209ENST00000560055 MKL1Q969V6 931 aa19.92■□□□□ 0.78
RPL28-209ENST00000560055 VCPKMTQ9H867 229 aa19.92■□□□□ 0.78
RPL28-209ENST00000560055 IL17RBQ9NRM6 502 aa19.92■□□□□ 0.78
RPL28-209ENST00000560055 PNMA3Q9UL41 463 aa19.92■□□□□ 0.78
RPL28-209ENST00000560055 SYNPO2Q9UMS6 1093 aa19.92■□□□□ 0.78
RPL28-209ENST00000560055 RBM8AQ9Y5S9 174 aaKnown RBP19.92■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms