RNA–Protein interactions for RNA: ENST00000560013.5

TM2D3-209, Transcript of TM2 domain containing 3, human

TSL 2

Gene TM2D3, Length 1,868 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TM2D3-209	ENST00000560013	AGBL3	Q8NEM8	1001 aa		27.3	■■□□□ 1.96
TM2D3-209	ENST00000560013	MAP3K14	Q99558	947 aa		27.3	■■□□□ 1.96
TM2D3-209	ENST00000560013	EHD4	Q9H223	541 aa		27.3	■■□□□ 1.96
TM2D3-209	ENST00000560013	TFIP11	Q9UBB9	837 aa	Known RBP	27.3	■■□□□ 1.96
TM2D3-209	ENST00000560013	ZBTB12	Q9Y330	459 aa	Predicted RBP	27.3	■■□□□ 1.96
TM2D3-209	ENST00000560013	TRIM29	Q14134	588 aa		27.3	■■□□□ 1.96
TM2D3-209	ENST00000560013	CFAP45	Q9UL16	551 aa		27.3	■■□□□ 1.96
TM2D3-209	ENST00000560013	STX8	Q9UNK0	236 aa		27.3	■■□□□ 1.96
TM2D3-209	ENST00000560013	ARFGEF1	Q9Y6D6	1849 aa		27.29	■■□□□ 1.96
TM2D3-209	ENST00000560013	UBE2Q2L	H0YL09	131 aa		27.29	■■□□□ 1.96
TM2D3-209	ENST00000560013	UBE2H	P62256	183 aa		27.29	■■□□□ 1.96
TM2D3-209	ENST00000560013	FUT2	Q10981	343 aa		27.29	■■□□□ 1.96
TM2D3-209	ENST00000560013	KRT40	Q6A162	431 aa		27.29	■■□□□ 1.96
TM2D3-209	ENST00000560013	KIF5B	P33176	963 aa		27.28	■■□□□ 1.96
TM2D3-209	ENST00000560013	GUCY1A2	P33402	732 aa		27.28	■■□□□ 1.96
TM2D3-209	ENST00000560013	ATL3	Q6DD88	541 aa		27.28	■■□□□ 1.96
TM2D3-209	ENST00000560013	TMTC3	Q6ZXV5	915 aa		27.28	■■□□□ 1.96
TM2D3-209	ENST00000560013	TMEM47	Q9BQJ4	181 aa		27.28	■■□□□ 1.96
TM2D3-209	ENST00000560013	ELP1	O95163	1332 aa		27.28	■■□□□ 1.96
TM2D3-209	ENST00000560013	LTBP3	Q9NS15	1303 aa		27.28	■■□□□ 1.96
TM2D3-209	ENST00000560013	PLIN4	Q96Q06	1357 aa		27.28	■■□□□ 1.96
TM2D3-209	ENST00000560013	SPDYE2B	A6NHP3	402 aa		27.27	■■□□□ 1.96
TM2D3-209	ENST00000560013	PLEKHA8P1	O95397	391 aa		27.27	■■□□□ 1.96
TM2D3-209	ENST00000560013	SPDYE6	P0CI01	402 aa		27.27	■■□□□ 1.96
TM2D3-209	ENST00000560013	AKAP17A	Q02040	695 aa	Known RBP	27.27	■■□□□ 1.96
TM2D3-209	ENST00000560013	PI4KB	Q9UBF8	816 aa		27.27	■■□□□ 1.96
TM2D3-209	ENST00000560013	SIPA1L1	O43166	1804 aa		27.27	■■□□□ 1.96
TM2D3-209	ENST00000560013	PRPF3	O43395	683 aa	Known RBP	27.27	■■□□□ 1.96
TM2D3-209	ENST00000560013	ENTPD3	O75355	529 aa		27.27	■■□□□ 1.96
TM2D3-209	ENST00000560013	DLGAP5	Q15398	846 aa		27.27	■■□□□ 1.96
TM2D3-209	ENST00000560013	CIAPIN1	Q6FI81	312 aa		27.27	■■□□□ 1.96
TM2D3-209	ENST00000560013	CAVIN1	Q6NZI2	390 aa	Known RBP	27.27	■■□□□ 1.96
TM2D3-209	ENST00000560013	NLGN2	Q8NFZ4	835 aa		27.27	■■□□□ 1.96
TM2D3-209	ENST00000560013	SPATA32	Q96LK8	384 aa		27.27	■■□□□ 1.96
TM2D3-209	ENST00000560013	DDTL	A6NHG4	134 aa	Predicted RBP	27.26	■■□□□ 1.95
TM2D3-209	ENST00000560013	SHMT1	P34896	483 aa		27.26	■■□□□ 1.95
TM2D3-209	ENST00000560013	NOV	P48745	357 aa		27.26	■■□□□ 1.95
TM2D3-209	ENST00000560013	KIF23	Q02241	960 aa	Predicted RBP	27.26	■■□□□ 1.95
TM2D3-209	ENST00000560013	BRAP	Q7Z569	592 aa		27.26	■■□□□ 1.95
TM2D3-209	ENST00000560013	CEP95	Q96GE4	821 aa		27.26	■■□□□ 1.95
TM2D3-209	ENST00000560013	ZNF396	Q96N95	335 aa	Predicted RBP	27.26	■■□□□ 1.95
TM2D3-209	ENST00000560013	SPON1	Q9HCB6	807 aa		27.26	■■□□□ 1.95
TM2D3-209	ENST00000560013	ZSCAN29	Q8IWY8	852 aa	Predicted RBP	27.25	■■□□□ 1.95
TM2D3-209	ENST00000560013	TAOK2	Q9UL54	1235 aa		27.25	■■□□□ 1.95
TM2D3-209	ENST00000560013	SH3BP5L	Q7L8J4	393 aa		27.25	■■□□□ 1.95
TM2D3-209	ENST00000560013	SRBD1	Q8N5C6	995 aa	Known RBP	27.25	■■□□□ 1.95
TM2D3-209	ENST00000560013	LEO1	Q8WVC0	666 aa	Predicted RBP	27.25	■■□□□ 1.95
TM2D3-209	ENST00000560013	GNL3	Q9BVP2	549 aa	Known RBP eCLIP	27.25	■■□□□ 1.95
TM2D3-209	ENST00000560013	TMOD2	Q9NZR1	351 aa		27.25	■■□□□ 1.95
TM2D3-209	ENST00000560013	AKR1B1	P15121	316 aa		27.24	■■□□□ 1.95
TM2D3-209	ENST00000560013	GRM4	Q14833	912 aa		27.24	■■□□□ 1.95
TM2D3-209	ENST00000560013	TNIP1	Q15025	636 aa		27.24	■■□□□ 1.95
TM2D3-209	ENST00000560013		V9GY48	417 aa	Predicted RBP	27.24	■■□□□ 1.95
TM2D3-209	ENST00000560013	TOP1	P11387	765 aa	Known RBP	27.23	■■□□□ 1.95
TM2D3-209	ENST00000560013	FOXP4	Q8IVH2	680 aa	Predicted RBP	27.23	■■□□□ 1.95
TM2D3-209	ENST00000560013	MTMR14	Q8NCE2	650 aa		27.23	■■□□□ 1.95
TM2D3-209	ENST00000560013	CCDC17	Q96LX7	622 aa		27.23	■■□□□ 1.95
TM2D3-209	ENST00000560013	MTMR4	Q9NYA4	1195 aa		27.23	■■□□□ 1.95
TM2D3-209	ENST00000560013	CNTNAP5	Q8WYK1	1306 aa		27.23	■■□□□ 1.95
TM2D3-209	ENST00000560013	ATRNL1	Q5VV63	1379 aa		27.23	■■□□□ 1.95
TM2D3-209	ENST00000560013	COL2A1	P02458	1487 aa	Predicted RBP	27.22	■■□□□ 1.95
TM2D3-209	ENST00000560013	IGKV6D-41	A0A0C4DH26	115 aa		27.22	■■□□□ 1.95
TM2D3-209	ENST00000560013	KIF28P	B7ZC32	967 aa		27.22	■■□□□ 1.95
TM2D3-209	ENST00000560013	GNAQ	P50148	359 aa		27.22	■■□□□ 1.95
TM2D3-209	ENST00000560013	PKN1	Q16512	942 aa		27.22	■■□□□ 1.95
TM2D3-209	ENST00000560013	DNAJC18	Q9H819	358 aa		27.22	■■□□□ 1.95
TM2D3-209	ENST00000560013	RASSF7	Q02833	373 aa		27.21	■■□□□ 1.95
TM2D3-209	ENST00000560013	ZNF70	Q9UC06	446 aa	Predicted RBP	27.21	■■□□□ 1.95
TM2D3-209	ENST00000560013	MAD2L2	Q9UI95	211 aa		27.21	■■□□□ 1.95
TM2D3-209	ENST00000560013	GREB1L	Q9C091	1923 aa	Predicted RBP	27.21	■■□□□ 1.95
TM2D3-209	ENST00000560013	MMP1	P03956	469 aa		27.21	■■□□□ 1.95
TM2D3-209	ENST00000560013	XBP1	P17861	261 aa		27.21	■■□□□ 1.95
TM2D3-209	ENST00000560013	USP28	Q96RU2	1077 aa		27.21	■■□□□ 1.95
TM2D3-209	ENST00000560013	RBM27	Q9P2N5	1060 aa	Known RBP	27.21	■■□□□ 1.95
TM2D3-209	ENST00000560013	U2AF2	P26368	475 aa	Known RBP eCLIP	27.2	■■□□□ 1.94
TM2D3-209	ENST00000560013	GNL2	Q13823	731 aa	Known RBP	27.2	■■□□□ 1.94
TM2D3-209	ENST00000560013	SAFB	Q15424	915 aa	Known RBP eCLIP	27.2	■■□□□ 1.94
TM2D3-209	ENST00000560013	MYSM1	Q5VVJ2	828 aa		27.2	■■□□□ 1.94
TM2D3-209	ENST00000560013	METTL16	Q86W50	562 aa	Known RBP	27.2	■■□□□ 1.94
TM2D3-209	ENST00000560013	TRIM34	Q9BYJ4	488 aa		27.2	■■□□□ 1.94
TM2D3-209	ENST00000560013	TMEM63C	Q9P1W3	806 aa		27.2	■■□□□ 1.94
TM2D3-209	ENST00000560013	RCOR1	Q9UKL0	485 aa		27.2	■■□□□ 1.94
TM2D3-209	ENST00000560013	CLRN2	A0PK11	232 aa		27.19	■■□□□ 1.94
TM2D3-209	ENST00000560013	MMP14	P50281	582 aa		27.19	■■□□□ 1.94
TM2D3-209	ENST00000560013	CEBPZ	Q03701	1054 aa	Known RBP	27.19	■■□□□ 1.94
TM2D3-209	ENST00000560013	SPDYE2	Q495Y8	402 aa		27.19	■■□□□ 1.94
TM2D3-209	ENST00000560013	STAG2	Q8N3U4	1231 aa		27.19	■■□□□ 1.94
TM2D3-209	ENST00000560013	BAZ2B	Q9UIF8	2168 aa	Known RBP	27.19	■■□□□ 1.94
TM2D3-209	ENST00000560013	PALM3	A6NDB9	673 aa	Predicted RBP	27.19	■■□□□ 1.94
TM2D3-209	ENST00000560013	SLURP2	P0DP57	97 aa		27.19	■■□□□ 1.94
TM2D3-209	ENST00000560013	SYAP1	Q96A49	352 aa	Predicted RBP	27.19	■■□□□ 1.94
TM2D3-209	ENST00000560013	KCNJ14	Q9UNX9	436 aa		27.19	■■□□□ 1.94
TM2D3-209	ENST00000560013	hCG_1642624	A0A1W2PR95	340 aa		27.18	■■□□□ 1.94
TM2D3-209	ENST00000560013	TCP10L2	B9ZVM9	353 aa		27.18	■■□□□ 1.94
TM2D3-209	ENST00000560013	TPRN	Q4KMQ1	711 aa		27.18	■■□□□ 1.94
TM2D3-209	ENST00000560013	TATDN1	Q6P1N9	297 aa		27.18	■■□□□ 1.94
TM2D3-209	ENST00000560013	FTO	Q9C0B1	505 aa	Known RBP eCLIP	27.18	■■□□□ 1.94
TM2D3-209	ENST00000560013	MTMR7	Q9Y216	660 aa		27.18	■■□□□ 1.94
TM2D3-209	ENST00000560013	TTLL1	O95922	423 aa		27.17	■■□□□ 1.94
TM2D3-209	ENST00000560013	RPS12	P25398	132 aa	Known RBP	27.17	■■□□□ 1.94

Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms