RNA–Protein interactions for RNA: ENST00000559937.1

SMAD3-212, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 579 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-212ENST00000559937 NCAPHQ15003 741 aa9.28□□□□□ -0.92
SMAD3-212ENST00000559937 CT47A1Q5JQC4 288 aaPredicted RBP9.28□□□□□ -0.92
SMAD3-212ENST00000559937 NT5DC1Q5TFE4 455 aa9.28□□□□□ -0.92
SMAD3-212ENST00000559937 OLFM4Q6UX06 510 aa9.28□□□□□ -0.92
SMAD3-212ENST00000559937 PTF1AQ7RTS3 328 aa9.28□□□□□ -0.92
SMAD3-212ENST00000559937 TMC4Q7Z404 712 aa9.28□□□□□ -0.92
SMAD3-212ENST00000559937 DZIP1Q86YF9 867 aaKnown RBP9.28□□□□□ -0.92
SMAD3-212ENST00000559937 LRRC8AQ8IWT6 810 aa9.28□□□□□ -0.92
SMAD3-212ENST00000559937 AMOTL1Q8IY63 956 aa9.28□□□□□ -0.92
SMAD3-212ENST00000559937 CNBD1Q8NA66 436 aa9.28□□□□□ -0.92
SMAD3-212ENST00000559937 CCDC150Q8NCX0 1101 aa9.28□□□□□ -0.92
SMAD3-212ENST00000559937 CTCFLQ8NI51 663 aaPredicted RBP9.28□□□□□ -0.92
SMAD3-212ENST00000559937 FERMT2Q96AC1 680 aa9.28□□□□□ -0.92
SMAD3-212ENST00000559937 SH3GLB2Q9NR46 395 aa9.28□□□□□ -0.92
SMAD3-212ENST00000559937 TCP11L1Q9NUJ3 509 aa9.28□□□□□ -0.92
SMAD3-212ENST00000559937 AATFQ9NY61 560 aaKnown RBP eCLIP9.28□□□□□ -0.92
SMAD3-212ENST00000559937 MKRN1Q9UHC7 482 aaKnown RBP9.28□□□□□ -0.92
SMAD3-212ENST00000559937 DACH1Q9UI36 760 aa9.28□□□□□ -0.92
SMAD3-212ENST00000559937 KCNJ14Q9UNX9 436 aa9.28□□□□□ -0.92
SMAD3-212ENST00000559937 CYP2D7A0A087X1C5 515 aa9.27□□□□□ -0.93
SMAD3-212ENST00000559937 WTIPA6NIX2 430 aaPredicted RBP9.27□□□□□ -0.93
SMAD3-212ENST00000559937 NRDCO43847 1150 aa9.27□□□□□ -0.93
SMAD3-212ENST00000559937 ATP2B4P23634 1241 aa9.27□□□□□ -0.93
SMAD3-212ENST00000559937 CALML3P27482 149 aa9.27□□□□□ -0.93
SMAD3-212ENST00000559937 GNAQP50148 359 aa9.27□□□□□ -0.93
SMAD3-212ENST00000559937 MDM2Q00987 491 aaPredicted RBP9.27□□□□□ -0.93
SMAD3-212ENST00000559937 CCDC144BQ3MJ40 725 aa9.27□□□□□ -0.93
SMAD3-212ENST00000559937 CRY2Q49AN0 593 aa9.27□□□□□ -0.93
SMAD3-212ENST00000559937 C12orf60Q5U649 245 aa9.27□□□□□ -0.93
SMAD3-212ENST00000559937 METTL16Q86W50 562 aaKnown RBP9.27□□□□□ -0.93
SMAD3-212ENST00000559937 DGKHQ86XP1 1220 aa9.27□□□□□ -0.93
SMAD3-212ENST00000559937 MPNDQ8N594 471 aa9.27□□□□□ -0.93
SMAD3-212ENST00000559937 CNNM3Q8NE01 707 aa9.27□□□□□ -0.93
SMAD3-212ENST00000559937 CACTINQ8WUQ7 758 aaKnown RBP9.27□□□□□ -0.93
SMAD3-212ENST00000559937 TNFRSF25Q93038 417 aa9.27□□□□□ -0.93
SMAD3-212ENST00000559937 PYM1Q9BRP8 204 aaKnown RBP9.27□□□□□ -0.93
SMAD3-212ENST00000559937 TFCP2L1Q9NZI6 479 aa9.27□□□□□ -0.93
SMAD3-212ENST00000559937 NRBP1Q9UHY1 535 aa9.27□□□□□ -0.93
SMAD3-212ENST00000559937 UBE2Q2LH0YL09 131 aa9.26□□□□□ -0.93
SMAD3-212ENST00000559937 KIF2AO00139 706 aaPredicted RBP9.26□□□□□ -0.93
SMAD3-212ENST00000559937 NPHP1O15259 732 aa9.26□□□□□ -0.93
SMAD3-212ENST00000559937 PLEKHA8P1O95397 391 aa9.26□□□□□ -0.93
SMAD3-212ENST00000559937 PLCG2P16885 1265 aa9.26□□□□□ -0.93
SMAD3-212ENST00000559937 ST5P78524 1137 aa9.26□□□□□ -0.93
SMAD3-212ENST00000559937 NR5A1Q13285 461 aa9.26□□□□□ -0.93
SMAD3-212ENST00000559937 POSTNQ15063 836 aa9.26□□□□□ -0.93
SMAD3-212ENST00000559937 SLC27A3Q5K4L6 730 aa9.26□□□□□ -0.93
SMAD3-212ENST00000559937 SLF2Q8IX21 1173 aa9.26□□□□□ -0.93
SMAD3-212ENST00000559937 MLKLQ8NB16 471 aa9.26□□□□□ -0.93
SMAD3-212ENST00000559937 RPGRQ92834 1020 aaKnown RBP9.26□□□□□ -0.93
SMAD3-212ENST00000559937 CLIC6Q96NY7 704 aa9.26□□□□□ -0.93
SMAD3-212ENST00000559937 CAMKK2Q96RR4 588 aa9.26□□□□□ -0.93
SMAD3-212ENST00000559937 ZNF287Q9HBT7 754 aa9.26□□□□□ -0.93
SMAD3-212ENST00000559937 ANKIB1Q9P2G1 1089 aa9.26□□□□□ -0.93
SMAD3-212ENST00000559937 PCDHB6Q9Y5E3 794 aa9.26□□□□□ -0.93
SMAD3-212ENST00000559937 C10orf71Q711Q0 1435 aa9.25□□□□□ -0.93
SMAD3-212ENST00000559937 TSPY2A6NKD2 308 aa9.25□□□□□ -0.93
SMAD3-212ENST00000559937 BIN1O00499 593 aa9.25□□□□□ -0.93
SMAD3-212ENST00000559937 SMC2O95347 1197 aa9.25□□□□□ -0.93
SMAD3-212ENST00000559937 APBA3O96018 575 aa9.25□□□□□ -0.93
SMAD3-212ENST00000559937 SCG2P13521 617 aa9.25□□□□□ -0.93
SMAD3-212ENST00000559937 IL1R1P14778 569 aa9.25□□□□□ -0.93
SMAD3-212ENST00000559937 HOXA10P31260 410 aaPredicted RBP9.25□□□□□ -0.93
SMAD3-212ENST00000559937 USP5P45974 858 aa9.25□□□□□ -0.93
SMAD3-212ENST00000559937 SARSP49591 514 aaKnown RBP9.25□□□□□ -0.93
SMAD3-212ENST00000559937 FANCCQ00597 558 aa9.25□□□□□ -0.93
SMAD3-212ENST00000559937 LRMPQ12912 555 aa9.25□□□□□ -0.93
SMAD3-212ENST00000559937 PNOCQ13519 176 aa9.25□□□□□ -0.93
SMAD3-212ENST00000559937 GRM4Q14833 912 aa9.25□□□□□ -0.93
SMAD3-212ENST00000559937 EZH2Q15910 746 aaKnown RBP9.25□□□□□ -0.93
SMAD3-212ENST00000559937 PFKFB3Q16875 520 aaPredicted RBP9.25□□□□□ -0.93
SMAD3-212ENST00000559937 LONRF3Q496Y0 759 aa9.25□□□□□ -0.93
SMAD3-212ENST00000559937 GALNT17Q6IS24 598 aa9.25□□□□□ -0.93
SMAD3-212ENST00000559937 RCSD1Q6JBY9 416 aa9.25□□□□□ -0.93
SMAD3-212ENST00000559937 PRR5LQ6MZQ0 368 aa9.25□□□□□ -0.93
SMAD3-212ENST00000559937 TXNRD3Q86VQ6 643 aa9.25□□□□□ -0.93
SMAD3-212ENST00000559937 AMIGO3Q86WK7 504 aa9.25□□□□□ -0.93
SMAD3-212ENST00000559937 C17orf53Q8N3J3 647 aaPredicted RBP9.25□□□□□ -0.93
SMAD3-212ENST00000559937 SPATA20Q8TB22 786 aa9.25□□□□□ -0.93
SMAD3-212ENST00000559937 OXER1Q8TDS5 423 aa9.25□□□□□ -0.93
SMAD3-212ENST00000559937 TBC1D22AQ8WUA7 517 aa9.25□□□□□ -0.93
SMAD3-212ENST00000559937 ERCC4Q92889 916 aaPredicted RBP9.25□□□□□ -0.93
SMAD3-212ENST00000559937 FAM163AQ96GL9 167 aaPredicted RBP9.25□□□□□ -0.93
SMAD3-212ENST00000559937 RBM17Q96I25 401 aaKnown RBP9.25□□□□□ -0.93
SMAD3-212ENST00000559937 CRAMP1Q96RY5 1269 aa9.25□□□□□ -0.93
SMAD3-212ENST00000559937 LZTS2Q9BRK4 669 aa9.25□□□□□ -0.93
SMAD3-212ENST00000559937 XPO4Q9C0E2 1151 aaKnown RBP9.25□□□□□ -0.93
SMAD3-212ENST00000559937 KAT14Q9H8E8 782 aa9.25□□□□□ -0.93
SMAD3-212ENST00000559937 CABP5Q9NP86 173 aa9.25□□□□□ -0.93
SMAD3-212ENST00000559937 MCM9Q9NXL9 1143 aa9.25□□□□□ -0.93
SMAD3-212ENST00000559937 PODXL2Q9NZ53 605 aa9.25□□□□□ -0.93
SMAD3-212ENST00000559937 VPS54Q9P1Q0 977 aa9.25□□□□□ -0.93
SMAD3-212ENST00000559937 PCDHA5Q9Y5H7 936 aa9.25□□□□□ -0.93
SMAD3-212ENST00000559937 V9GY48 417 aaPredicted RBP9.25□□□□□ -0.93
SMAD3-212ENST00000559937 A0A087WWV3 80 aa9.24□□□□□ -0.93
SMAD3-212ENST00000559937 PSDA5PKW4 1024 aaPredicted RBP9.24□□□□□ -0.93
SMAD3-212ENST00000559937 ACTN4O43707 911 aaKnown RBP9.24□□□□□ -0.93
SMAD3-212ENST00000559937 PRDM1O75626 825 aa9.24□□□□□ -0.93
SMAD3-212ENST00000559937 BBOX1O75936 387 aa9.24□□□□□ -0.93
SMAD3-212ENST00000559937 TUBB4AP04350 444 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms