RNA–Protein interactions for RNA: ENST00000559658.5

CHRNA3-206, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 2

Gene CHRNA3, Length 1,889 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-206ENST00000559658 PRAMEF18Q5VWM3 479 aa20.26■□□□□ 0.83
CHRNA3-206ENST00000559658 TATDN1Q6P1N9 297 aa20.26■□□□□ 0.83
CHRNA3-206ENST00000559658 DLK2Q6UY11 383 aa20.26■□□□□ 0.83
CHRNA3-206ENST00000559658 TMEM47Q9BQJ4 181 aa20.26■□□□□ 0.83
CHRNA3-206ENST00000559658 MTMR7Q9Y216 660 aa20.26■□□□□ 0.83
CHRNA3-206ENST00000559658 MPHOSPH10O00566 681 aaKnown RBP20.26■□□□□ 0.83
CHRNA3-206ENST00000559658 SYT1P21579 422 aa20.26■□□□□ 0.83
CHRNA3-206ENST00000559658 MMP14P50281 582 aa20.26■□□□□ 0.83
CHRNA3-206ENST00000559658 NTRK3Q16288 839 aa20.26■□□□□ 0.83
CHRNA3-206ENST00000559658 PHKBQ93100 1093 aa20.26■□□□□ 0.83
CHRNA3-206ENST00000559658 GRIN3BO60391 1043 aa20.25■□□□□ 0.83
CHRNA3-206ENST00000559658 GUCY1A2P33402 732 aa20.25■□□□□ 0.83
CHRNA3-206ENST00000559658 DGKHQ86XP1 1220 aa20.25■□□□□ 0.83
CHRNA3-206ENST00000559658 ATAD5Q96QE3 1844 aa20.25■□□□□ 0.83
CHRNA3-206ENST00000559658 RTN1Q16799 776 aa20.24■□□□□ 0.83
CHRNA3-206ENST00000559658 CERKLQ49MI3 558 aaPredicted RBP20.24■□□□□ 0.83
CHRNA3-206ENST00000559658 FOXP4Q8IVH2 680 aaPredicted RBP20.24■□□□□ 0.83
CHRNA3-206ENST00000559658 LRRC47Q8N1G4 583 aaKnown RBP20.24■□□□□ 0.83
CHRNA3-206ENST00000559658 TMTC2Q8N394 836 aa20.24■□□□□ 0.83
CHRNA3-206ENST00000559658 FANCBQ8NB91 859 aa20.24■□□□□ 0.83
CHRNA3-206ENST00000559658 PNMA1Q8ND90 353 aa20.24■□□□□ 0.83
CHRNA3-206ENST00000559658 TRIM34Q9BYJ4 488 aa20.24■□□□□ 0.83
CHRNA3-206ENST00000559658 DEFB129Q9H1M3 183 aa20.24■□□□□ 0.83
CHRNA3-206ENST00000559658 XPO5Q9HAV4 1204 aaKnown RBP eCLIP20.24■□□□□ 0.83
CHRNA3-206ENST00000559658 MTMR4Q9NYA4 1195 aa20.24■□□□□ 0.83
CHRNA3-206ENST00000559658 PLEKHA8P1O95397 391 aa20.24■□□□□ 0.83
CHRNA3-206ENST00000559658 NOVP48745 357 aa20.24■□□□□ 0.83
CHRNA3-206ENST00000559658 CATIPQ7Z7H3 387 aa20.24■□□□□ 0.83
CHRNA3-206ENST00000559658 CCDC82Q8N4S0 544 aa20.24■□□□□ 0.83
CHRNA3-206ENST00000559658 ANKS1AQ92625 1134 aa20.24■□□□□ 0.83
CHRNA3-206ENST00000559658 TNPO1Q92973 898 aaKnown RBP20.24■□□□□ 0.83
CHRNA3-206ENST00000559658 AIFM3Q96NN9 605 aa20.24■□□□□ 0.83
CHRNA3-206ENST00000559658 LLPHQ9BRT6 129 aaKnown RBP20.24■□□□□ 0.83
CHRNA3-206ENST00000559658 KAT14Q9H8E8 782 aa20.24■□□□□ 0.83
CHRNA3-206ENST00000559658 FZD1Q9UP38 647 aa20.24■□□□□ 0.83
CHRNA3-206ENST00000559658 SSC5DA1L4H1 1573 aa20.23■□□□□ 0.83
CHRNA3-206ENST00000559658 SYNE3Q6ZMZ3 975 aa20.23■□□□□ 0.83
CHRNA3-206ENST00000559658 GJB4Q9NTQ9 266 aa20.23■□□□□ 0.83
CHRNA3-206ENST00000559658 BAZ2BQ9UIF8 2168 aaKnown RBP20.23■□□□□ 0.83
CHRNA3-206ENST00000559658 CPLX1O14810 134 aa20.22■□□□□ 0.83
CHRNA3-206ENST00000559658 BRD1O95696 1058 aa20.22■□□□□ 0.83
CHRNA3-206ENST00000559658 LMOD1P29536 600 aaPredicted RBP20.22■□□□□ 0.83
CHRNA3-206ENST00000559658 SEPT2Q15019 361 aa20.22■□□□□ 0.83
CHRNA3-206ENST00000559658 NBPF12Q5TAG4 269 aaPredicted RBP20.22■□□□□ 0.83
CHRNA3-206ENST00000559658 TAOK2Q9UL54 1235 aa20.22■□□□□ 0.83
CHRNA3-206ENST00000559658 MYH6P13533 1939 aa20.22■□□□□ 0.83
CHRNA3-206ENST00000559658 DDAH1O94760 285 aa20.22■□□□□ 0.83
CHRNA3-206ENST00000559658 GH2P01242 217 aa20.22■□□□□ 0.83
CHRNA3-206ENST00000559658 TNNI2P48788 182 aa20.22■□□□□ 0.83
CHRNA3-206ENST00000559658 CDC37L1Q7L3B6 337 aa20.22■□□□□ 0.83
CHRNA3-206ENST00000559658 L3MBTL3Q96JM7 780 aaPredicted RBP20.22■□□□□ 0.83
CHRNA3-206ENST00000559658 ADARB2Q9NS39 739 aaKnown RBP20.22■□□□□ 0.83
CHRNA3-206ENST00000559658 HERC5Q9UII4 1024 aaKnown RBP20.22■□□□□ 0.83
CHRNA3-206ENST00000559658 STX6O43752 255 aa20.21■□□□□ 0.83
CHRNA3-206ENST00000559658 NT5C2P49902 561 aa20.21■□□□□ 0.83
CHRNA3-206ENST00000559658 TNFAIP1Q13829 316 aa20.21■□□□□ 0.83
CHRNA3-206ENST00000559658 NBPF11Q86T75 865 aa20.21■□□□□ 0.83
CHRNA3-206ENST00000559658 SIAH1Q8IUQ4 282 aa20.21■□□□□ 0.83
CHRNA3-206ENST00000559658 STAG2Q8N3U4 1231 aa20.21■□□□□ 0.83
CHRNA3-206ENST00000559658 MTMR6Q9Y217 621 aa20.21■□□□□ 0.83
CHRNA3-206ENST00000559658 hCG_1642624A0A1W2PR95 340 aa20.2■□□□□ 0.82
CHRNA3-206ENST00000559658 VPS37CA5D8V6 355 aaPredicted RBP20.2■□□□□ 0.82
CHRNA3-206ENST00000559658 GLTPD2A6NH11 291 aa20.2■□□□□ 0.82
CHRNA3-206ENST00000559658 ABCB5Q2M3G0 1257 aa20.2■□□□□ 0.82
CHRNA3-206ENST00000559658 SLC35G1Q2M3R5 365 aa20.2■□□□□ 0.82
CHRNA3-206ENST00000559658 LARP1BQ659C4 914 aaKnown RBP20.2■□□□□ 0.82
CHRNA3-206ENST00000559658 OTUD7BQ6GQQ9 843 aa20.2■□□□□ 0.82
CHRNA3-206ENST00000559658 CCDC84Q86UT8 332 aaPredicted RBP20.2■□□□□ 0.82
CHRNA3-206ENST00000559658 ORC3Q9UBD5 711 aaPredicted RBP20.2■□□□□ 0.82
CHRNA3-206ENST00000559658 CLIP2Q9UDT6 1046 aa20.2■□□□□ 0.82
CHRNA3-206ENST00000559658 POTECB2RU33 542 aa20.2■□□□□ 0.82
CHRNA3-206ENST00000559658 GOLGA8HP0CJ92 632 aa20.2■□□□□ 0.82
CHRNA3-206ENST00000559658 RCAN1P53805 252 aa20.2■□□□□ 0.82
CHRNA3-206ENST00000559658 ATP2B2Q01814 1243 aa20.2■□□□□ 0.82
CHRNA3-206ENST00000559658 FUT2Q10981 343 aa20.2■□□□□ 0.82
CHRNA3-206ENST00000559658 CPVLQ9H3G5 476 aa20.2■□□□□ 0.82
CHRNA3-206ENST00000559658 WDR90Q96KV7 1748 aa20.19■□□□□ 0.82
CHRNA3-206ENST00000559658 TOP1P11387 765 aaKnown RBP20.19■□□□□ 0.82
CHRNA3-206ENST00000559658 NUCB2P80303 420 aa20.19■□□□□ 0.82
CHRNA3-206ENST00000559658 GUCY1B3Q02153 619 aa20.19■□□□□ 0.82
CHRNA3-206ENST00000559658 FOXD4L6Q3SYB3 417 aaPredicted RBP20.19■□□□□ 0.82
CHRNA3-206ENST00000559658 DPY19L2Q6NUT2 758 aa20.19■□□□□ 0.82
CHRNA3-206ENST00000559658 FOXD4L3Q6VB84 417 aaPredicted RBP20.19■□□□□ 0.82
CHRNA3-206ENST00000559658 CCDC17Q96LX7 622 aa20.19■□□□□ 0.82
CHRNA3-206ENST00000559658 SLC26A6Q9BXS9 759 aa20.19■□□□□ 0.82
CHRNA3-206ENST00000559658 MAD2L2Q9UI95 211 aa20.19■□□□□ 0.82
CHRNA3-206ENST00000559658 SCN4AP35499 1836 aa20.19■□□□□ 0.82
CHRNA3-206ENST00000559658 PHF20L1A8MW92 1017 aa20.18■□□□□ 0.82
CHRNA3-206ENST00000559658 ADM5C9JUS6 153 aa20.18■□□□□ 0.82
CHRNA3-206ENST00000559658 DHX16O60231 1041 aaKnown RBP20.18■□□□□ 0.82
CHRNA3-206ENST00000559658 TTLL1O95922 423 aa20.18■□□□□ 0.82
CHRNA3-206ENST00000559658 EEF2P13639 858 aaKnown RBP20.18■□□□□ 0.82
CHRNA3-206ENST00000559658 TMTC3Q6ZXV5 915 aa20.18■□□□□ 0.82
CHRNA3-206ENST00000559658 APOBEC3FQ8IUX4 373 aaKnown RBP20.18■□□□□ 0.82
CHRNA3-206ENST00000559658 SRBD1Q8N5C6 995 aaKnown RBP20.18■□□□□ 0.82
CHRNA3-206ENST00000559658 FAM184AQ8NB25 1140 aa20.18■□□□□ 0.82
CHRNA3-206ENST00000559658 CNTNAP5Q8WYK1 1306 aa20.18■□□□□ 0.82
CHRNA3-206ENST00000559658 USP17L5A8MUK1 530 aa20.18■□□□□ 0.82
CHRNA3-206ENST00000559658 TBC1D12O60347 775 aa20.18■□□□□ 0.82
CHRNA3-206ENST00000559658 IFNAR1P17181 557 aa20.18■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms