RNA–Protein interactions for RNA: ENST00000558989.1

SPG11-214, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 1,816 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-214ENST00000558989 GH2P01242 217 aa11.58□□□□□ -0.56
SPG11-214ENST00000558989 APPP05067 770 aa11.58□□□□□ -0.56
SPG11-214ENST00000558989 HMGCS2P54868 508 aa11.58□□□□□ -0.56
SPG11-214ENST00000558989 RAB3GAP1Q15042 981 aa11.58□□□□□ -0.56
SPG11-214ENST00000558989 RILPL2Q969X0 211 aa11.58□□□□□ -0.56
SPG11-214ENST00000558989 ABHD8Q96I13 439 aa11.58□□□□□ -0.56
SPG11-214ENST00000558989 PCMTD1Q96MG8 357 aaPredicted RBP11.58□□□□□ -0.56
SPG11-214ENST00000558989 DOCK3Q8IZD9 2030 aa11.58□□□□□ -0.56
SPG11-214ENST00000558989 MGAMO43451 1857 aa11.58□□□□□ -0.56
SPG11-214ENST00000558989 USP17L12C9JPN9 530 aa11.58□□□□□ -0.56
SPG11-214ENST00000558989 USP17L21D6R901 530 aa11.58□□□□□ -0.56
SPG11-214ENST00000558989 MOGSQ13724 837 aa11.58□□□□□ -0.56
SPG11-214ENST00000558989 CERKLQ49MI3 558 aaPredicted RBP11.58□□□□□ -0.56
SPG11-214ENST00000558989 TREML2Q5T2D2 321 aa11.58□□□□□ -0.56
SPG11-214ENST00000558989 CCDC129Q6ZRS4 1044 aa11.58□□□□□ -0.56
SPG11-214ENST00000558989 CTU1Q7Z7A3 348 aaKnown RBP11.58□□□□□ -0.56
SPG11-214ENST00000558989 APPBP2Q92624 585 aa11.58□□□□□ -0.56
SPG11-214ENST00000558989 POM121Q96HA1 1249 aa11.58□□□□□ -0.56
SPG11-214ENST00000558989 ZBTB21Q9ULJ3 1066 aa11.58□□□□□ -0.56
SPG11-214ENST00000558989 TRIM17Q9Y577 477 aa11.58□□□□□ -0.56
SPG11-214ENST00000558989 A0A0G2JLL6 359 aaPredicted RBP11.57□□□□□ -0.56
SPG11-214ENST00000558989 MINDY4BA8MYZ0 360 aa11.57□□□□□ -0.56
SPG11-214ENST00000558989 CXCL11O14625 94 aa11.57□□□□□ -0.56
SPG11-214ENST00000558989 GPAA1O43292 621 aa11.57□□□□□ -0.56
SPG11-214ENST00000558989 CAP1Q01518 475 aa11.57□□□□□ -0.56
SPG11-214ENST00000558989 NUCB1Q02818 461 aa11.57□□□□□ -0.56
SPG11-214ENST00000558989 MTMR2Q13614 643 aa11.57□□□□□ -0.56
SPG11-214ENST00000558989 GPAT2Q6NUI2 795 aa11.57□□□□□ -0.56
SPG11-214ENST00000558989 TMED8Q6PL24 325 aaPredicted RBP11.57□□□□□ -0.56
SPG11-214ENST00000558989 PRRT2Q7Z6L0 340 aaPredicted RBP11.57□□□□□ -0.56
SPG11-214ENST00000558989 ZNF280CQ8ND82 737 aa11.57□□□□□ -0.56
SPG11-214ENST00000558989 STRBPQ96SI9 672 aaKnown RBP11.57□□□□□ -0.56
SPG11-214ENST00000558989 AS3MTQ9HBK9 375 aa11.57□□□□□ -0.56
SPG11-214ENST00000558989 LOC285556D6RIA3 1793 aa11.57□□□□□ -0.56
SPG11-214ENST00000558989 ASNSP08243 561 aa11.56□□□□□ -0.56
SPG11-214ENST00000558989 SHMT1P34896 483 aa11.56□□□□□ -0.56
SPG11-214ENST00000558989 SP3Q02447 781 aa11.56□□□□□ -0.56
SPG11-214ENST00000558989 ABCB5Q2M3G0 1257 aa11.56□□□□□ -0.56
SPG11-214ENST00000558989 ANKRD23Q86SG2 305 aa11.56□□□□□ -0.56
SPG11-214ENST00000558989 AMOTL1Q8IY63 956 aa11.56□□□□□ -0.56
SPG11-214ENST00000558989 ARHGAP39Q9C0H5 1083 aa11.56□□□□□ -0.56
SPG11-214ENST00000558989 ATP8A2Q9NTI2 1148 aa11.56□□□□□ -0.56
SPG11-214ENST00000558989 ZFYP08048 801 aaPredicted RBP11.56□□□□□ -0.56
SPG11-214ENST00000558989 TDO2P48775 406 aa11.56□□□□□ -0.56
SPG11-214ENST00000558989 FASTKD5Q7L8L6 764 aaKnown RBP11.56□□□□□ -0.56
SPG11-214ENST00000558989 CLEC10AQ8IUN9 316 aa11.56□□□□□ -0.56
SPG11-214ENST00000558989 PLEKHM2Q8IWE5 1019 aa11.56□□□□□ -0.56
SPG11-214ENST00000558989 FEZ1Q99689 392 aa11.56□□□□□ -0.56
SPG11-214ENST00000558989 CFHR5Q9BXR6 569 aa11.56□□□□□ -0.56
SPG11-214ENST00000558989 EHD4Q9H223 541 aa11.56□□□□□ -0.56
SPG11-214ENST00000558989 CABP5Q9NP86 173 aa11.56□□□□□ -0.56
SPG11-214ENST00000558989 STAP2Q9UGK3 403 aa11.56□□□□□ -0.56
SPG11-214ENST00000558989 GSG1L2A8MUP6 293 aa11.55□□□□□ -0.56
SPG11-214ENST00000558989 TLR2O60603 784 aa11.55□□□□□ -0.56
SPG11-214ENST00000558989 C1QBPQ07021 282 aaKnown RBP11.55□□□□□ -0.56
SPG11-214ENST00000558989 SEPT2Q15019 361 aa11.55□□□□□ -0.56
SPG11-214ENST00000558989 AMHR2Q16671 573 aa11.55□□□□□ -0.56
SPG11-214ENST00000558989 LRRFIP1Q32MZ4 808 aaKnown RBP11.55□□□□□ -0.56
SPG11-214ENST00000558989 TATDN1Q6P1N9 297 aa11.55□□□□□ -0.56
SPG11-214ENST00000558989 CTR9Q6PD62 1173 aa11.55□□□□□ -0.56
SPG11-214ENST00000558989 METTL16Q86W50 562 aaKnown RBP11.55□□□□□ -0.56
SPG11-214ENST00000558989 SMCR8Q8TEV9 937 aaPredicted RBP11.55□□□□□ -0.56
SPG11-214ENST00000558989 EVI5LQ96CN4 794 aa11.55□□□□□ -0.56
SPG11-214ENST00000558989 BCCIPQ9P287 314 aaKnown RBP eCLIP11.55□□□□□ -0.56
SPG11-214ENST00000558989 C12orf60Q5U649 245 aa11.54□□□□□ -0.56
SPG11-214ENST00000558989 PARP9Q8IXQ6 854 aa11.54□□□□□ -0.56
SPG11-214ENST00000558989 ACER1Q8TDN7 264 aa11.54□□□□□ -0.56
SPG11-214ENST00000558989 ERO1AQ96HE7 468 aa11.54□□□□□ -0.56
SPG11-214ENST00000558989 FAM227BQ96M60 508 aa11.54□□□□□ -0.56
SPG11-214ENST00000558989 PARK7Q99497 189 aaKnown RBP11.54□□□□□ -0.56
SPG11-214ENST00000558989 EPB41L4AQ9HCS5 686 aaPredicted RBP11.54□□□□□ -0.56
SPG11-214ENST00000558989 TMOD4Q9NZQ9 345 aa11.54□□□□□ -0.56
SPG11-214ENST00000558989 MYH4Q9Y623 1939 aa11.54□□□□□ -0.56
SPG11-214ENST00000558989 USP17L10C9JJH3 530 aa11.53□□□□□ -0.56
SPG11-214ENST00000558989 PEX10O60683 326 aa11.53□□□□□ -0.56
SPG11-214ENST00000558989 AKR1B1P15121 316 aa11.53□□□□□ -0.56
SPG11-214ENST00000558989 PDE4AP27815 886 aa11.53□□□□□ -0.56
SPG11-214ENST00000558989 CDK8P49336 464 aa11.53□□□□□ -0.56
SPG11-214ENST00000558989 BACE1P56817 501 aa11.53□□□□□ -0.56
SPG11-214ENST00000558989 ATP2B2Q01814 1243 aa11.53□□□□□ -0.56
SPG11-214ENST00000558989 GABPAQ06546 454 aa11.53□□□□□ -0.56
SPG11-214ENST00000558989 ZMYM1Q5SVZ6 1142 aa11.53□□□□□ -0.56
SPG11-214ENST00000558989 SND1Q7KZF4 910 aaKnown RBP eCLIP11.53□□□□□ -0.56
SPG11-214ENST00000558989 OTOP1Q7RTM1 612 aa11.53□□□□□ -0.56
SPG11-214ENST00000558989 EFCC1Q9HA90 598 aa11.53□□□□□ -0.56
SPG11-214ENST00000558989 AGTPBP1Q9UPW5 1226 aa11.53□□□□□ -0.56
SPG11-214ENST00000558989 A0A0D9SFI3 127 aa11.53□□□□□ -0.56
SPG11-214ENST00000558989 PRDM1O75626 825 aa11.53□□□□□ -0.56
SPG11-214ENST00000558989 MYCP01106 439 aaPredicted RBP11.53□□□□□ -0.56
SPG11-214ENST00000558989 NMIQ13287 307 aaPredicted RBP11.53□□□□□ -0.56
SPG11-214ENST00000558989 IFNL3Q8IZI9 196 aa11.53□□□□□ -0.56
SPG11-214ENST00000558989 ANKRD13CQ8N6S4 541 aa11.53□□□□□ -0.56
SPG11-214ENST00000558989 GUCY1A2P33402 732 aa11.52□□□□□ -0.57
SPG11-214ENST00000558989 KIF22Q14807 665 aa11.52□□□□□ -0.57
SPG11-214ENST00000558989 NOM1Q5C9Z4 860 aaKnown RBP11.52□□□□□ -0.57
SPG11-214ENST00000558989 VPS53Q5VIR6 699 aa11.52□□□□□ -0.57
SPG11-214ENST00000558989 SKAP1Q86WV1 359 aa11.52□□□□□ -0.57
SPG11-214ENST00000558989 PROCA1Q8NCQ7 364 aaPredicted RBP11.52□□□□□ -0.57
SPG11-214ENST00000558989 FAM212AQ96EL1 285 aa11.52□□□□□ -0.57
SPG11-214ENST00000558989 WDR18Q9BV38 432 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms