RNA–Protein interactions for RNA: ENST00000558763.1

SMAD3-207, Transcript of SMAD family member 3, humanhuman

TSL 2

Gene SMAD3, Length 1,957 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-207ENST00000558763 PDE4BQ07343 736 aa15.06■□□□□ 0
SMAD3-207ENST00000558763 TBC1D10BQ4KMP7 808 aaPredicted RBP15.06■□□□□ 0
SMAD3-207ENST00000558763 CDC42EP5Q6NZY7 148 aa15.06■□□□□ 0
SMAD3-207ENST00000558763 SAMD7Q7Z3H4 446 aa15.06■□□□□ 0
SMAD3-207ENST00000558763 IQCA1Q86XH1 822 aa15.06■□□□□ 0
SMAD3-207ENST00000558763 SLC44A5Q8NCS7 719 aa15.06■□□□□ 0
SMAD3-207ENST00000558763 USP28Q96RU2 1077 aa15.06■□□□□ 0
SMAD3-207ENST00000558763 ALG1Q9BT22 464 aa15.06■□□□□ 0
SMAD3-207ENST00000558763 TDRD3Q9H7E2 651 aaKnown RBP15.06■□□□□ 0
SMAD3-207ENST00000558763 IL17RBQ9NRM6 502 aa15.06■□□□□ 0
SMAD3-207ENST00000558763 USP40Q9NVE5 1235 aa15.06■□□□□ 0
SMAD3-207ENST00000558763 GPRC5DQ9NZD1 345 aa15.06■□□□□ 0
SMAD3-207ENST00000558763 SIPA1L1O43166 1804 aa15.06■□□□□ 0
SMAD3-207ENST00000558763 SYCE3A1L190 88 aa15.05■□□□□ 0
SMAD3-207ENST00000558763 SLC3A2P08195 630 aaKnown RBP15.05■□□□□ 0
SMAD3-207ENST00000558763 IFIT1BQ5T764 474 aaKnown RBP15.05■□□□□ 0
SMAD3-207ENST00000558763 L1TD1Q5T7N2 865 aaKnown RBP15.05■□□□□ 0
SMAD3-207ENST00000558763 CPLX2Q6PUV4 134 aaKnown RBP15.05■□□□□ 0
SMAD3-207ENST00000558763 SPATA32Q96LK8 384 aa15.05■□□□□ 0
SMAD3-207ENST00000558763 GRPEL1Q9HAV7 217 aa15.05■□□□□ 0
SMAD3-207ENST00000558763 SAP30BPQ9UHR5 308 aaKnown RBP15.05■□□□□ 0
SMAD3-207ENST00000558763 CLRN2A0PK11 232 aa15.05■□□□□ -0
SMAD3-207ENST00000558763 H7C1D1 291 aa15.05■□□□□ -0
SMAD3-207ENST00000558763 EPS15P42566 896 aa15.05■□□□□ -0
SMAD3-207ENST00000558763 NT5C2P49902 561 aa15.05■□□□□ -0
SMAD3-207ENST00000558763 PICALMQ13492 652 aa15.05■□□□□ -0
SMAD3-207ENST00000558763 NBPF9Q3BBW0 867 aa15.05■□□□□ -0
SMAD3-207ENST00000558763 KRT40Q6A162 431 aa15.05■□□□□ -0
SMAD3-207ENST00000558763 SYNE3Q6ZMZ3 975 aa15.05■□□□□ -0
SMAD3-207ENST00000558763 CMTR1Q8N1G2 835 aaKnown RBP15.05■□□□□ -0
SMAD3-207ENST00000558763 CRACR2BQ8N4Y2 399 aaPredicted RBP15.05■□□□□ -0
SMAD3-207ENST00000558763 SHISA4Q96DD7 197 aa15.05■□□□□ -0
SMAD3-207ENST00000558763 RCOR1Q9UKL0 485 aa15.05■□□□□ -0
SMAD3-207ENST00000558763 MYH8P13535 1937 aa15.05■□□□□ -0
SMAD3-207ENST00000558763 BAZ2BQ9UIF8 2168 aaKnown RBP15.04■□□□□ -0
SMAD3-207ENST00000558763 WDHD1O75717 1129 aaPredicted RBP15.04■□□□□ -0
SMAD3-207ENST00000558763 LMOD1P29536 600 aaPredicted RBP15.04■□□□□ -0
SMAD3-207ENST00000558763 MRE11P49959 708 aa15.04■□□□□ -0
SMAD3-207ENST00000558763 C16orf86Q6ZW13 317 aa15.04■□□□□ -0
SMAD3-207ENST00000558763 NUP133Q8WUM0 1156 aa15.04■□□□□ -0
SMAD3-207ENST00000558763 SLC26A6Q9BXS9 759 aa15.04■□□□□ -0
SMAD3-207ENST00000558763 PANK2Q9BZ23 570 aa15.04■□□□□ -0
SMAD3-207ENST00000558763 GLTPD2A6NH11 291 aa15.04■□□□□ -0
SMAD3-207ENST00000558763 WNT10BO00744 389 aa15.04■□□□□ -0
SMAD3-207ENST00000558763 DDAH1O94760 285 aa15.04■□□□□ -0
SMAD3-207ENST00000558763 RASA1P20936 1047 aa15.04■□□□□ -0
SMAD3-207ENST00000558763 NFIAQ12857 509 aa15.04■□□□□ -0
SMAD3-207ENST00000558763 KIF4BQ2VIQ3 1234 aa15.04■□□□□ -0
SMAD3-207ENST00000558763 ATL3Q6DD88 541 aa15.04■□□□□ -0
SMAD3-207ENST00000558763 LRSAM1Q6UWE0 723 aa15.04■□□□□ -0
SMAD3-207ENST00000558763 ANKS1AQ92625 1134 aa15.04■□□□□ -0
SMAD3-207ENST00000558763 DDX4Q9NQI0 724 aaKnown RBP15.04■□□□□ -0
SMAD3-207ENST00000558763 GREB1LQ9C091 1923 aaPredicted RBP15.03■□□□□ -0
SMAD3-207ENST00000558763 CCDC196A0A1B0GTZ2 297 aa15.03■□□□□ -0
SMAD3-207ENST00000558763 TSPY2A6NKD2 308 aa15.03■□□□□ -0
SMAD3-207ENST00000558763 LIG1P18858 919 aa15.03■□□□□ -0
SMAD3-207ENST00000558763 SSRP1Q08945 709 aaKnown RBP15.03■□□□□ -0
SMAD3-207ENST00000558763 PPP2R5BQ15173 497 aa15.03■□□□□ -0
SMAD3-207ENST00000558763 CCDC183Q5T5S1 534 aa15.03■□□□□ -0
SMAD3-207ENST00000558763 MYSM1Q5VVJ2 828 aa15.03■□□□□ -0
SMAD3-207ENST00000558763 BRAPQ7Z569 592 aa15.03■□□□□ -0
SMAD3-207ENST00000558763 MTMR14Q8NCE2 650 aa15.03■□□□□ -0
SMAD3-207ENST00000558763 TRPM4Q8TD43 1214 aa15.03■□□□□ -0
SMAD3-207ENST00000558763 CFAP45Q9UL16 551 aa15.03■□□□□ -0
SMAD3-207ENST00000558763 PLEKHA8P1O95397 391 aa15.02■□□□□ -0
SMAD3-207ENST00000558763 TFAP4Q01664 338 aa15.02■□□□□ -0
SMAD3-207ENST00000558763 CATIPQ7Z7H3 387 aa15.02■□□□□ -0
SMAD3-207ENST00000558763 SYAP1Q96A49 352 aaPredicted RBP15.02■□□□□ -0
SMAD3-207ENST00000558763 ZBED3Q96IU2 234 aaPredicted RBP15.02■□□□□ -0
SMAD3-207ENST00000558763 VEZTQ9HBM0 779 aa15.02■□□□□ -0
SMAD3-207ENST00000558763 TCP11L1Q9NUJ3 509 aa15.02■□□□□ -0
SMAD3-207ENST00000558763 ASTN2O75129 1339 aaPredicted RBP15.02■□□□□ -0
SMAD3-207ENST00000558763 MYO1BO43795 1136 aa15.02□□□□□ -0.01
SMAD3-207ENST00000558763 POLR3DP05423 398 aaPredicted RBP15.02□□□□□ -0.01
SMAD3-207ENST00000558763 U2AF2P26368 475 aaKnown RBP eCLIP15.02□□□□□ -0.01
SMAD3-207ENST00000558763 MMP14P50281 582 aa15.02□□□□□ -0.01
SMAD3-207ENST00000558763 GABPAQ06546 454 aa15.02□□□□□ -0.01
SMAD3-207ENST00000558763 TCP10Q12799 353 aa15.02□□□□□ -0.01
SMAD3-207ENST00000558763 PKN1Q16512 942 aa15.02□□□□□ -0.01
SMAD3-207ENST00000558763 TMTC3Q6ZXV5 915 aa15.02□□□□□ -0.01
SMAD3-207ENST00000558763 RNF26Q9BY78 433 aaPredicted RBP15.02□□□□□ -0.01
SMAD3-207ENST00000558763 RTEL1Q9NZ71 1219 aa15.02□□□□□ -0.01
SMAD3-207ENST00000558763 CNTNAP5Q8WYK1 1306 aa15.01□□□□□ -0.01
SMAD3-207ENST00000558763 DEXIO95424 95 aa15.01□□□□□ -0.01
SMAD3-207ENST00000558763 CDK8P49336 464 aa15.01□□□□□ -0.01
SMAD3-207ENST00000558763 CEBPZQ03701 1054 aaKnown RBP15.01□□□□□ -0.01
SMAD3-207ENST00000558763 SPDYE2Q495Y8 402 aa15.01□□□□□ -0.01
SMAD3-207ENST00000558763 TPRNQ4KMQ1 711 aa15.01□□□□□ -0.01
SMAD3-207ENST00000558763 DGKHQ86XP1 1220 aa15.01□□□□□ -0.01
SMAD3-207ENST00000558763 L3MBTL3Q96JM7 780 aaPredicted RBP15.01□□□□□ -0.01
SMAD3-207ENST00000558763 TMOD2Q9NZR1 351 aa15.01□□□□□ -0.01
SMAD3-207ENST00000558763 ZNF70Q9UC06 446 aaPredicted RBP15.01□□□□□ -0.01
SMAD3-207ENST00000558763 SCAF8Q9UPN6 1271 aaKnown RBP15.01□□□□□ -0.01
SMAD3-207ENST00000558763 TCP10L2B9ZVM9 353 aa15□□□□□ -0.01
SMAD3-207ENST00000558763 CALM1P0DP23 149 aa15□□□□□ -0.01
SMAD3-207ENST00000558763 CALM2P0DP24 149 aa15□□□□□ -0.01
SMAD3-207ENST00000558763 CALM3P0DP25 149 aa15□□□□□ -0.01
SMAD3-207ENST00000558763 NASPP49321 788 aaPredicted RBP15□□□□□ -0.01
SMAD3-207ENST00000558763 AMOTL1Q8IY63 956 aa15□□□□□ -0.01
SMAD3-207ENST00000558763 CCDC82Q8N4S0 544 aa15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms