RNA–Protein interactions for RNA: ENST00000558700.5

TRAF3-205, Transcript of TNF receptor associated factor 3, humanhuman

TSL 3

Gene TRAF3, Length 738 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-205ENST00000558700 EN2P19622 333 aaPredicted RBP9.8□□□□□ -0.84
TRAF3-205ENST00000558700 FECHP22830 423 aa9.8□□□□□ -0.84
TRAF3-205ENST00000558700 GRK4P32298 578 aa9.8□□□□□ -0.84
TRAF3-205ENST00000558700 HMGCS2P54868 508 aa9.8□□□□□ -0.84
TRAF3-205ENST00000558700 UBXN2AP68543 259 aa9.8□□□□□ -0.84
TRAF3-205ENST00000558700 PRKCZQ05513 592 aa9.8□□□□□ -0.84
TRAF3-205ENST00000558700 PTGDRQ13258 359 aa9.8□□□□□ -0.84
TRAF3-205ENST00000558700 TTF1Q15361 905 aaPredicted RBP9.8□□□□□ -0.84
TRAF3-205ENST00000558700 RPAP2Q8IXW5 612 aaPredicted RBP9.8□□□□□ -0.84
TRAF3-205ENST00000558700 CLASRPQ8N2M8 674 aaKnown RBP9.8□□□□□ -0.84
TRAF3-205ENST00000558700 MAGEB6Q8N7X4 407 aa9.8□□□□□ -0.84
TRAF3-205ENST00000558700 SLAIN1Q8ND83 568 aa9.8□□□□□ -0.84
TRAF3-205ENST00000558700 GCC1Q96CN9 775 aa9.8□□□□□ -0.84
TRAF3-205ENST00000558700 KIF1BPQ96EK5 621 aa9.8□□□□□ -0.84
TRAF3-205ENST00000558700 GINM1Q9NU53 330 aa9.8□□□□□ -0.84
TRAF3-205ENST00000558700 MYH8P13535 1937 aa9.8□□□□□ -0.84
TRAF3-205ENST00000558700 TNPO2O14787 897 aaKnown RBP9.79□□□□□ -0.84
TRAF3-205ENST00000558700 MYCP01106 439 aaPredicted RBP9.79□□□□□ -0.84
TRAF3-205ENST00000558700 USP5P45974 858 aa9.79□□□□□ -0.84
TRAF3-205ENST00000558700 GCLCP48506 637 aaPredicted RBP9.79□□□□□ -0.84
TRAF3-205ENST00000558700 ATN1P54259 1190 aaPredicted RBP9.79□□□□□ -0.84
TRAF3-205ENST00000558700 DYNLL1P63167 89 aaKnown RBP9.79□□□□□ -0.84
TRAF3-205ENST00000558700 SPP2Q13103 211 aa9.79□□□□□ -0.84
TRAF3-205ENST00000558700 MTMR2Q13614 643 aa9.79□□□□□ -0.84
TRAF3-205ENST00000558700 SH3D19Q5HYK7 790 aa9.79□□□□□ -0.84
TRAF3-205ENST00000558700 TREML2Q5T2D2 321 aa9.79□□□□□ -0.84
TRAF3-205ENST00000558700 FOXP4Q8IVH2 680 aaPredicted RBP9.79□□□□□ -0.84
TRAF3-205ENST00000558700 MIGA1Q8NAN2 632 aa9.79□□□□□ -0.84
TRAF3-205ENST00000558700 NKX2-3Q8TAU0 364 aa9.79□□□□□ -0.84
TRAF3-205ENST00000558700 RHPN1Q8TCX5 695 aa9.79□□□□□ -0.84
TRAF3-205ENST00000558700 DNAJC18Q9H819 358 aa9.79□□□□□ -0.84
TRAF3-205ENST00000558700 IL1RAPL2Q9NP60 686 aa9.79□□□□□ -0.84
TRAF3-205ENST00000558700 TMOD4Q9NZQ9 345 aa9.79□□□□□ -0.84
TRAF3-205ENST00000558700 BIN2Q9UBW5 565 aaPredicted RBP9.79□□□□□ -0.84
TRAF3-205ENST00000558700 SAP30BPQ9UHR5 308 aaKnown RBP9.79□□□□□ -0.84
TRAF3-205ENST00000558700 RCAN3Q9UKA8 241 aa9.79□□□□□ -0.84
TRAF3-205ENST00000558700 PALD1Q9ULE6 856 aa9.79□□□□□ -0.84
TRAF3-205ENST00000558700 ZBTB21Q9ULJ3 1066 aa9.79□□□□□ -0.84
TRAF3-205ENST00000558700 RAB11FIP3O75154 756 aa9.78□□□□□ -0.84
TRAF3-205ENST00000558700 IFIT2P09913 472 aaKnown RBP9.78□□□□□ -0.84
TRAF3-205ENST00000558700 IRX3P78415 501 aaPredicted RBP9.78□□□□□ -0.84
TRAF3-205ENST00000558700 RRP1BQ14684 758 aaKnown RBP9.78□□□□□ -0.84
TRAF3-205ENST00000558700 METTL16Q86W50 562 aaKnown RBP9.78□□□□□ -0.84
TRAF3-205ENST00000558700 ANKRD13CQ8N6S4 541 aa9.78□□□□□ -0.84
TRAF3-205ENST00000558700 PPIL4Q8WUA2 492 aaKnown RBP eCLIP9.78□□□□□ -0.84
TRAF3-205ENST00000558700 COA7Q96BR5 231 aa9.78□□□□□ -0.84
TRAF3-205ENST00000558700 WDR18Q9BV38 432 aa9.78□□□□□ -0.84
TRAF3-205ENST00000558700 EHD4Q9H223 541 aa9.78□□□□□ -0.84
TRAF3-205ENST00000558700 COG6Q9Y2V7 657 aa9.78□□□□□ -0.84
TRAF3-205ENST00000558700 NDUFB9Q9Y6M9 179 aa9.78□□□□□ -0.84
TRAF3-205ENST00000558700 CENPFP49454 3210 aa9.77□□□□□ -0.84
TRAF3-205ENST00000558700 C19orf81C9J6K1 198 aa9.77□□□□□ -0.85
TRAF3-205ENST00000558700 USP17L10C9JJH3 530 aa9.77□□□□□ -0.85
TRAF3-205ENST00000558700 GDF11O95390 407 aa9.77□□□□□ -0.85
TRAF3-205ENST00000558700 BACE1P56817 501 aa9.77□□□□□ -0.85
TRAF3-205ENST00000558700 IRF5Q13568 498 aa9.77□□□□□ -0.85
TRAF3-205ENST00000558700 TTC6Q86TZ1 520 aa9.77□□□□□ -0.85
TRAF3-205ENST00000558700 PXYLP1Q8TE99 480 aa9.77□□□□□ -0.85
TRAF3-205ENST00000558700 GTF3C2Q8WUA4 911 aaPredicted RBP9.77□□□□□ -0.85
TRAF3-205ENST00000558700 SHISA4Q96DD7 197 aa9.77□□□□□ -0.85
TRAF3-205ENST00000558700 DNAJC2Q99543 621 aaKnown RBP9.77□□□□□ -0.85
TRAF3-205ENST00000558700 FEZ1Q99689 392 aa9.77□□□□□ -0.85
TRAF3-205ENST00000558700 CRNKL1Q9BZJ0 848 aaKnown RBP9.77□□□□□ -0.85
TRAF3-205ENST00000558700 ASCC2Q9H1I8 757 aaPredicted RBP9.77□□□□□ -0.85
TRAF3-205ENST00000558700 ANTXR1Q9H6X2 564 aa9.77□□□□□ -0.85
TRAF3-205ENST00000558700 ZBTB40Q9NUA8 1239 aa9.77□□□□□ -0.85
TRAF3-205ENST00000558700 SERPINB13Q9UIV8 391 aa9.77□□□□□ -0.85
TRAF3-205ENST00000558700 MAGEB6P1A0A0J9YX57 407 aa9.76□□□□□ -0.85
TRAF3-205ENST00000558700 ADCY3O60266 1144 aa9.76□□□□□ -0.85
TRAF3-205ENST00000558700 GJB1P08034 283 aa9.76□□□□□ -0.85
TRAF3-205ENST00000558700 CCL5P13501 91 aa9.76□□□□□ -0.85
TRAF3-205ENST00000558700 PDE6AP16499 860 aa9.76□□□□□ -0.85
TRAF3-205ENST00000558700 CLCN1P35523 988 aa9.76□□□□□ -0.85
TRAF3-205ENST00000558700 FLT3LGP49771 235 aa9.76□□□□□ -0.85
TRAF3-205ENST00000558700 MTFR1Q15390 333 aa9.76□□□□□ -0.85
TRAF3-205ENST00000558700 RIOK1Q9BRS2 568 aaKnown RBP9.76□□□□□ -0.85
TRAF3-205ENST00000558700 RNF208Q9H0X6 261 aa9.76□□□□□ -0.85
TRAF3-205ENST00000558700 MORF4L1Q9UBU8 362 aa9.76□□□□□ -0.85
TRAF3-205ENST00000558700 GABRQQ9UN88 632 aa9.76□□□□□ -0.85
TRAF3-205ENST00000558700 PLXNB2O15031 1838 aa9.76□□□□□ -0.85
TRAF3-205ENST00000558700 DOCK3Q8IZD9 2030 aa9.75□□□□□ -0.85
TRAF3-205ENST00000558700 GOLIM4O00461 696 aa9.75□□□□□ -0.85
TRAF3-205ENST00000558700 GH2P01242 217 aa9.75□□□□□ -0.85
TRAF3-205ENST00000558700 INHAP05111 366 aa9.75□□□□□ -0.85
TRAF3-205ENST00000558700 HOXA7P31268 230 aaPredicted RBP9.75□□□□□ -0.85
TRAF3-205ENST00000558700 GJA8P48165 433 aa9.75□□□□□ -0.85
TRAF3-205ENST00000558700 PDE3AQ14432 1141 aa9.75□□□□□ -0.85
TRAF3-205ENST00000558700 SLC9C2Q5TAH2 1124 aa9.75□□□□□ -0.85
TRAF3-205ENST00000558700 USP17L2Q6R6M4 530 aa9.75□□□□□ -0.85
TRAF3-205ENST00000558700 BAZ2AQ9UIF9 1905 aaKnown RBP9.74□□□□□ -0.85
TRAF3-205ENST00000558700 A0A0G2JMZ2 1700 aa9.74□□□□□ -0.85
TRAF3-205ENST00000558700 A6NJR5 290 aa9.74□□□□□ -0.85
TRAF3-205ENST00000558700 ATMINO43313 823 aaPredicted RBP9.74□□□□□ -0.85
TRAF3-205ENST00000558700 HMGCRP04035 888 aa9.74□□□□□ -0.85
TRAF3-205ENST00000558700 ELNP15502 786 aa9.74□□□□□ -0.85
TRAF3-205ENST00000558700 CAPN2P17655 700 aa9.74□□□□□ -0.85
TRAF3-205ENST00000558700 USP14P54578 494 aa9.74□□□□□ -0.85
TRAF3-205ENST00000558700 HERVK_113P62684 666 aa9.74□□□□□ -0.85
TRAF3-205ENST00000558700 SHROOM1Q2M3G4 852 aaPredicted RBP9.74□□□□□ -0.85
TRAF3-205ENST00000558700 TATDN1Q6P1N9 297 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms