RNA–Protein interactions for RNA: ENST00000558471.5

LRRC28-206, Transcript of leucine rich repeat containing 28, humanhuman

TSL 3

Gene LRRC28, Length 793 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-206ENST00000558471 ZNF444Q8N0Y2 327 aaPredicted RBP14.86□□□□□ -0.03
LRRC28-206ENST00000558471 ACER1Q8TDN7 264 aa14.86□□□□□ -0.03
LRRC28-206ENST00000558471 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.86□□□□□ -0.03
LRRC28-206ENST00000558471 ZNF287Q9HBT7 754 aa14.86□□□□□ -0.03
LRRC28-206ENST00000558471 GREB1LQ9C091 1923 aaPredicted RBP14.86□□□□□ -0.03
LRRC28-206ENST00000558471 C19orf81C9J6K1 198 aa14.85□□□□□ -0.03
LRRC28-206ENST00000558471 PDHXO00330 501 aa14.85□□□□□ -0.03
LRRC28-206ENST00000558471 HAND2P61296 217 aa14.85□□□□□ -0.03
LRRC28-206ENST00000558471 PTH1RQ03431 593 aa14.85□□□□□ -0.03
LRRC28-206ENST00000558471 CLEC10AQ8IUN9 316 aa14.85□□□□□ -0.03
LRRC28-206ENST00000558471 CFHR5Q9BXR6 569 aa14.85□□□□□ -0.03
LRRC28-206ENST00000558471 ZCCHC17Q9NP64 241 aaKnown RBP14.85□□□□□ -0.03
LRRC28-206ENST00000558471 DDX52Q9Y2R4 599 aaKnown RBP eCLIP14.85□□□□□ -0.03
LRRC28-206ENST00000558471 LOC285556D6RIA3 1793 aa14.85□□□□□ -0.03
LRRC28-206ENST00000558471 A0A1W2PRG0 241 aa14.84□□□□□ -0.03
LRRC28-206ENST00000558471 ZNF213O14771 459 aa14.84□□□□□ -0.03
LRRC28-206ENST00000558471 FGRP09769 529 aa14.84□□□□□ -0.03
LRRC28-206ENST00000558471 CRHR2Q13324 411 aa14.84□□□□□ -0.03
LRRC28-206ENST00000558471 TAF1CQ15572 869 aaPredicted RBP14.84□□□□□ -0.03
LRRC28-206ENST00000558471 FAM47AQ5JRC9 791 aa14.84□□□□□ -0.03
LRRC28-206ENST00000558471 TREML2Q5T2D2 321 aa14.84□□□□□ -0.03
LRRC28-206ENST00000558471 PROCA1Q8NCQ7 364 aaPredicted RBP14.84□□□□□ -0.03
LRRC28-206ENST00000558471 ESYT1Q9BSJ8 1104 aa14.84□□□□□ -0.03
LRRC28-206ENST00000558471 NBPF3Q9H094 633 aa14.84□□□□□ -0.03
LRRC28-206ENST00000558471 KANSL2Q9H9L4 492 aa14.84□□□□□ -0.03
LRRC28-206ENST00000558471 EMILIN3Q9NT22 766 aa14.84□□□□□ -0.03
LRRC28-206ENST00000558471 LAMA4Q16363 1823 aa14.84□□□□□ -0.03
LRRC28-206ENST00000558471 CDC45O75419 566 aa14.83□□□□□ -0.04
LRRC28-206ENST00000558471 TFAP4Q01664 338 aa14.83□□□□□ -0.04
LRRC28-206ENST00000558471 ZYXQ15942 572 aaKnown RBP14.83□□□□□ -0.04
LRRC28-206ENST00000558471 USP17L2Q6R6M4 530 aa14.83□□□□□ -0.04
LRRC28-206ENST00000558471 FEZ1Q99689 392 aa14.83□□□□□ -0.04
LRRC28-206ENST00000558471 KIAA1683Q9H0B3 1180 aa14.83□□□□□ -0.04
LRRC28-206ENST00000558471 ZFYVE28Q9HCC9 887 aa14.83□□□□□ -0.04
LRRC28-206ENST00000558471 TMOD4Q9NZQ9 345 aa14.83□□□□□ -0.04
LRRC28-206ENST00000558471 CTNNA3Q9UI47 895 aa14.83□□□□□ -0.04
LRRC28-206ENST00000558471 AGTPBP1Q9UPW5 1226 aa14.83□□□□□ -0.04
LRRC28-206ENST00000558471 MYH4Q9Y623 1939 aa14.82□□□□□ -0.04
LRRC28-206ENST00000558471 IGKV6D-41A0A0C4DH26 115 aa14.82□□□□□ -0.04
LRRC28-206ENST00000558471 GPR25O00155 361 aa14.82□□□□□ -0.04
LRRC28-206ENST00000558471 ORC4O43929 436 aa14.82□□□□□ -0.04
LRRC28-206ENST00000558471 EEF2P13639 858 aaKnown RBP14.82□□□□□ -0.04
LRRC28-206ENST00000558471 ICA1Q05084 483 aa14.82□□□□□ -0.04
LRRC28-206ENST00000558471 IMMTQ16891 758 aaKnown RBP14.82□□□□□ -0.04
LRRC28-206ENST00000558471 AKNAD1Q5T1N1 836 aa14.82□□□□□ -0.04
LRRC28-206ENST00000558471 MFSD6Q6ZSS7 791 aa14.82□□□□□ -0.04
LRRC28-206ENST00000558471 TBC1D10CQ8IV04 446 aa14.82□□□□□ -0.04
LRRC28-206ENST00000558471 NEDD1Q8NHV4 660 aa14.82□□□□□ -0.04
LRRC28-206ENST00000558471 SLC45A1Q9Y2W3 748 aa14.82□□□□□ -0.04
LRRC28-206ENST00000558471 RANBP6O60518 1105 aaKnown RBP14.81□□□□□ -0.04
LRRC28-206ENST00000558471 TSPY3P0CV98 308 aa14.81□□□□□ -0.04
LRRC28-206ENST00000558471 TSPY8P0CW00 308 aa14.81□□□□□ -0.04
LRRC28-206ENST00000558471 CYP2C8P10632 490 aa14.81□□□□□ -0.04
LRRC28-206ENST00000558471 USP14P54578 494 aa14.81□□□□□ -0.04
LRRC28-206ENST00000558471 ATP2B2Q01814 1243 aa14.81□□□□□ -0.04
LRRC28-206ENST00000558471 RRP12Q5JTH9 1297 aaKnown RBP14.81□□□□□ -0.04
LRRC28-206ENST00000558471 KIAA1211Q6ZU35 1233 aa14.81□□□□□ -0.04
LRRC28-206ENST00000558471 NKX2-3Q8TAU0 364 aa14.81□□□□□ -0.04
LRRC28-206ENST00000558471 STAG1Q8WVM7 1258 aa14.81□□□□□ -0.04
LRRC28-206ENST00000558471 MAP4K1Q92918 833 aa14.81□□□□□ -0.04
LRRC28-206ENST00000558471 C12orf42Q96LP6 360 aa14.81□□□□□ -0.04
LRRC28-206ENST00000558471 ARHGEF10LQ9HCE6 1279 aa14.81□□□□□ -0.04
LRRC28-206ENST00000558471 PRDM10Q9NQV6 1147 aa14.81□□□□□ -0.04
LRRC28-206ENST00000558471 TOMM22Q9NS69 142 aa14.81□□□□□ -0.04
LRRC28-206ENST00000558471 TMX2Q9Y320 296 aa14.81□□□□□ -0.04
LRRC28-206ENST00000558471 TSPY2A6NKD2 308 aa14.8□□□□□ -0.04
LRRC28-206ENST00000558471 TLR2O60603 784 aa14.8□□□□□ -0.04
LRRC28-206ENST00000558471 NOM1Q5C9Z4 860 aaKnown RBP14.8□□□□□ -0.04
LRRC28-206ENST00000558471 KIAA1755Q5JYT7 1200 aa14.8□□□□□ -0.04
LRRC28-206ENST00000558471 CASC1Q6TDU7 716 aa14.8□□□□□ -0.04
LRRC28-206ENST00000558471 ZNF296Q8WUU4 475 aaPredicted RBP14.8□□□□□ -0.04
LRRC28-206ENST00000558471 CEP95Q96GE4 821 aa14.8□□□□□ -0.04
LRRC28-206ENST00000558471 LSG1Q9H089 658 aaKnown RBP14.8□□□□□ -0.04
LRRC28-206ENST00000558471 MTMR4Q9NYA4 1195 aa14.8□□□□□ -0.04
LRRC28-206ENST00000558471 NYAP2Q9P242 653 aa14.8□□□□□ -0.04
LRRC28-206ENST00000558471 U3KPZ7 1027 aaPredicted RBP14.8□□□□□ -0.04
LRRC28-206ENST00000558471 NMT2O60551 498 aa14.79□□□□□ -0.04
LRRC28-206ENST00000558471 PCP11498 1178 aaKnown RBP14.79□□□□□ -0.04
LRRC28-206ENST00000558471 HOXA7P31268 230 aaPredicted RBP14.79□□□□□ -0.04
LRRC28-206ENST00000558471 NEDD4P46934 1319 aa14.79□□□□□ -0.04
LRRC28-206ENST00000558471 PABPC4Q13310 644 aaKnown RBP eCLIP14.79□□□□□ -0.04
LRRC28-206ENST00000558471 ADGRA2Q96PE1 1338 aa14.79□□□□□ -0.04
LRRC28-206ENST00000558471 PLIN4Q96Q06 1357 aa14.79□□□□□ -0.04
LRRC28-206ENST00000558471 PARK7Q99497 189 aaKnown RBP14.79□□□□□ -0.04
LRRC28-206ENST00000558471 ASCC2Q9H1I8 757 aaPredicted RBP14.79□□□□□ -0.04
LRRC28-206ENST00000558471 RNF41Q9H4P4 317 aaPredicted RBP14.79□□□□□ -0.04
LRRC28-206ENST00000558471 IL17RBQ9NRM6 502 aa14.79□□□□□ -0.04
LRRC28-206ENST00000558471 CLIP2Q9UDT6 1046 aa14.79□□□□□ -0.04
LRRC28-206ENST00000558471 CPA4Q9UI42 421 aa14.79□□□□□ -0.04
LRRC28-206ENST00000558471 FKTNO75072 461 aa14.78□□□□□ -0.04
LRRC28-206ENST00000558471 CYP21A2P08686 494 aa14.78□□□□□ -0.04
LRRC28-206ENST00000558471 VCAM1P19320 739 aa14.78□□□□□ -0.04
LRRC28-206ENST00000558471 OSBPP22059 807 aa14.78□□□□□ -0.04
LRRC28-206ENST00000558471 C17orf99Q6UX52 265 aa14.78□□□□□ -0.04
LRRC28-206ENST00000558471 MKL1Q969V6 931 aa14.78□□□□□ -0.04
LRRC28-206ENST00000558471 SH2D4AQ9H788 454 aa14.78□□□□□ -0.04
LRRC28-206ENST00000558471 VCPKMTQ9H867 229 aa14.78□□□□□ -0.04
LRRC28-206ENST00000558471 ANO2Q9NQ90 1003 aa14.78□□□□□ -0.04
LRRC28-206ENST00000558471 PNMA3Q9UL41 463 aa14.78□□□□□ -0.04
LRRC28-206ENST00000558471 RBM8AQ9Y5S9 174 aaKnown RBP14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms