RNA–Protein interactions for RNA: ENST00000558440.5

ZEB1-211, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 1 (best)

Gene ZEB1, Length 886 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-211ENST00000558440 TMEM88BA6NKF7 163 aa8.24□□□□□ -1.09
ZEB1-211ENST00000558440 DYRK3O43781 588 aa8.24□□□□□ -1.09
ZEB1-211ENST00000558440 DEAF1O75398 565 aaPredicted RBP8.24□□□□□ -1.09
ZEB1-211ENST00000558440 KCNA3P22001 575 aa8.24□□□□□ -1.09
ZEB1-211ENST00000558440 TNNT2P45379 298 aaPredicted RBP8.24□□□□□ -1.09
ZEB1-211ENST00000558440 EIF4A2Q14240 407 aaKnown RBP8.24□□□□□ -1.09
ZEB1-211ENST00000558440 PLEKHO1Q53GL0 409 aaPredicted RBP8.24□□□□□ -1.09
ZEB1-211ENST00000558440 ZNF530Q6P9A1 599 aaPredicted RBP8.24□□□□□ -1.09
ZEB1-211ENST00000558440 SMC1BQ8NDV3 1235 aa8.24□□□□□ -1.09
ZEB1-211ENST00000558440 HELQQ8TDG4 1101 aa8.24□□□□□ -1.09
ZEB1-211ENST00000558440 C1orf115Q9H7X2 142 aa8.24□□□□□ -1.09
ZEB1-211ENST00000558440 POLKQ9UBT6 870 aa8.24□□□□□ -1.09
ZEB1-211ENST00000558440 CACNA1SQ13698 1873 aa8.23□□□□□ -1.09
ZEB1-211ENST00000558440 KDM6AO15550 1401 aaPredicted RBP8.23□□□□□ -1.09
ZEB1-211ENST00000558440 CRKLP46109 303 aaKnown RBP8.23□□□□□ -1.09
ZEB1-211ENST00000558440 AMOTQ4VCS5 1084 aa8.23□□□□□ -1.09
ZEB1-211ENST00000558440 C1orf141Q5JVX7 400 aa8.23□□□□□ -1.09
ZEB1-211ENST00000558440 GDF6Q6KF10 455 aaPredicted RBP8.23□□□□□ -1.09
ZEB1-211ENST00000558440 IGF2-ASQ6U949 168 aa8.23□□□□□ -1.09
ZEB1-211ENST00000558440 SRP68Q9UHB9 627 aaKnown RBP8.23□□□□□ -1.09
ZEB1-211ENST00000558440 ADAMTS7Q9UKP4 1686 aa8.23□□□□□ -1.09
ZEB1-211ENST00000558440 USP42Q9H9J4 1324 aaKnown RBP8.23□□□□□ -1.09
ZEB1-211ENST00000558440 SCO2A0A1W2PP80 73 aa8.22□□□□□ -1.09
ZEB1-211ENST00000558440 CHRNA5P30532 468 aa8.22□□□□□ -1.09
ZEB1-211ENST00000558440 MTHFSP49914 203 aa8.22□□□□□ -1.09
ZEB1-211ENST00000558440 DDR1Q08345 913 aa8.22□□□□□ -1.09
ZEB1-211ENST00000558440 HYAL2Q12891 473 aa8.22□□□□□ -1.09
ZEB1-211ENST00000558440 TTC39BQ5VTQ0 682 aaPredicted RBP8.22□□□□□ -1.09
ZEB1-211ENST00000558440 IL22RA1Q8N6P7 574 aa8.22□□□□□ -1.09
ZEB1-211ENST00000558440 SSBP4Q9BWG4 385 aaPredicted RBP8.22□□□□□ -1.09
ZEB1-211ENST00000558440 ABI2Q9NYB9 513 aaPredicted RBP8.22□□□□□ -1.09
ZEB1-211ENST00000558440 NRXN2Q9P2S2 1712 aa8.22□□□□□ -1.09
ZEB1-211ENST00000558440 DLL1O00548 723 aa8.21□□□□□ -1.1
ZEB1-211ENST00000558440 H2AFB1P0C5Y9 115 aa8.21□□□□□ -1.1
ZEB1-211ENST00000558440 H2AFB2P0C5Z0 115 aa8.21□□□□□ -1.1
ZEB1-211ENST00000558440 SCNN1AP37088 669 aa8.21□□□□□ -1.1
ZEB1-211ENST00000558440 PRELPP51888 382 aa8.21□□□□□ -1.1
ZEB1-211ENST00000558440 PDE12Q6L8Q7 609 aaKnown RBP8.21□□□□□ -1.1
ZEB1-211ENST00000558440 ATCAYQ86WG3 371 aa8.21□□□□□ -1.1
ZEB1-211ENST00000558440 CACTIN-AS1Q8N1I8 211 aa8.21□□□□□ -1.1
ZEB1-211ENST00000558440 POLR3GLQ9BT43 218 aa8.21□□□□□ -1.1
ZEB1-211ENST00000558440 SRA1Q9HD15 236 aaKnown RBP8.21□□□□□ -1.1
ZEB1-211ENST00000558440 TRIM33Q9UPN9 1127 aa8.21□□□□□ -1.1
ZEB1-211ENST00000558440 FER1L6Q2WGJ9 1857 aa8.2□□□□□ -1.1
ZEB1-211ENST00000558440 POLRMTO00411 1230 aaKnown RBP8.2□□□□□ -1.1
ZEB1-211ENST00000558440 KIF4AO95239 1232 aa8.2□□□□□ -1.1
ZEB1-211ENST00000558440 VEGFAP15692 232 aaPredicted RBP8.2□□□□□ -1.1
ZEB1-211ENST00000558440 LMNB1P20700 586 aa8.2□□□□□ -1.1
ZEB1-211ENST00000558440 WFDC12Q8WWY7 111 aa8.2□□□□□ -1.1
ZEB1-211ENST00000558440 ANKRD31Q8N7Z5 1873 aa8.19□□□□□ -1.1
ZEB1-211ENST00000558440 GLTPD2A6NH11 291 aa8.19□□□□□ -1.1
ZEB1-211ENST00000558440 RPLP1P05386 114 aaKnown RBP8.19□□□□□ -1.1
ZEB1-211ENST00000558440 HSPA1AP0DMV8 641 aaKnown RBP8.19□□□□□ -1.1
ZEB1-211ENST00000558440 HSPA1BP0DMV9 641 aaKnown RBP8.19□□□□□ -1.1
ZEB1-211ENST00000558440 NOS3P29474 1203 aa8.19□□□□□ -1.1
ZEB1-211ENST00000558440 TM4SF1P30408 202 aa8.19□□□□□ -1.1
ZEB1-211ENST00000558440 IREB2P48200 963 aaKnown RBP8.19□□□□□ -1.1
ZEB1-211ENST00000558440 ATP11AP98196 1134 aa8.19□□□□□ -1.1
ZEB1-211ENST00000558440 LCE3BQ5TA77 95 aa8.19□□□□□ -1.1
ZEB1-211ENST00000558440 USPL1Q5W0Q7 1092 aa8.19□□□□□ -1.1
ZEB1-211ENST00000558440 MAP4K3Q8IVH8 894 aa8.19□□□□□ -1.1
ZEB1-211ENST00000558440 TP53INP1Q96A56 240 aa8.19□□□□□ -1.1
ZEB1-211ENST00000558440 SPACA7Q96KW9 195 aa8.19□□□□□ -1.1
ZEB1-211ENST00000558440 ELP3Q9H9T3 547 aa8.19□□□□□ -1.1
ZEB1-211ENST00000558440 TMEM63CQ9P1W3 806 aa8.19□□□□□ -1.1
ZEB1-211ENST00000558440 UBR2Q8IWV8 1755 aa8.18□□□□□ -1.1
ZEB1-211ENST00000558440 CYP2E1P05181 493 aaPredicted RBP8.18□□□□□ -1.1
ZEB1-211ENST00000558440 SETDB1Q15047 1291 aa8.18□□□□□ -1.1
ZEB1-211ENST00000558440 NOM1Q5C9Z4 860 aaKnown RBP8.18□□□□□ -1.1
ZEB1-211ENST00000558440 INTS5Q6P9B9 1019 aaKnown RBP8.18□□□□□ -1.1
ZEB1-211ENST00000558440 ZNF438Q7Z4V0 828 aa8.18□□□□□ -1.1
ZEB1-211ENST00000558440 AEBP1Q8IUX7 1158 aa8.18□□□□□ -1.1
ZEB1-211ENST00000558440 TTLL6Q8N841 843 aa8.18□□□□□ -1.1
ZEB1-211ENST00000558440 GTF3C2Q8WUA4 911 aaPredicted RBP8.18□□□□□ -1.1
ZEB1-211ENST00000558440 EDEM1Q92611 657 aa8.18□□□□□ -1.1
ZEB1-211ENST00000558440 MUC3BQ9H195 1237 aa8.18□□□□□ -1.1
ZEB1-211ENST00000558440 COL11A2P13942 1736 aaPredicted RBP8.17□□□□□ -1.1
ZEB1-211ENST00000558440 ARFGEF2Q9Y6D5 1785 aa8.17□□□□□ -1.1
ZEB1-211ENST00000558440 H0YIN7 160 aa8.17□□□□□ -1.1
ZEB1-211ENST00000558440 SMNDC1O75940 238 aaKnown RBP eCLIP8.17□□□□□ -1.1
ZEB1-211ENST00000558440 PDGFAP04085 211 aa8.17□□□□□ -1.1
ZEB1-211ENST00000558440 MPSTP25325 297 aa8.17□□□□□ -1.1
ZEB1-211ENST00000558440 NFIXQ14938 502 aa8.17□□□□□ -1.1
ZEB1-211ENST00000558440 PRSS36Q5K4E3 855 aa8.17□□□□□ -1.1
ZEB1-211ENST00000558440 CEP135Q66GS9 1140 aa8.17□□□□□ -1.1
ZEB1-211ENST00000558440 SULT6B1Q6IMI4 303 aa8.17□□□□□ -1.1
ZEB1-211ENST00000558440 XKR5Q6UX68 686 aa8.17□□□□□ -1.1
ZEB1-211ENST00000558440 C2CD5Q86YS7 1000 aa8.17□□□□□ -1.1
ZEB1-211ENST00000558440 DNAJC10Q8IXB1 793 aa8.17□□□□□ -1.1
ZEB1-211ENST00000558440 MRPL18Q9H0U6 180 aaKnown RBP8.17□□□□□ -1.1
ZEB1-211ENST00000558440 RASSF4Q9H2L5 321 aa8.17□□□□□ -1.1
ZEB1-211ENST00000558440 NARFQ9UHQ1 456 aa8.17□□□□□ -1.1
ZEB1-211ENST00000558440 PPME1Q9Y570 386 aa8.17□□□□□ -1.1
ZEB1-211ENST00000558440 SOS1Q07889 1333 aaPredicted RBP8.17□□□□□ -1.1
ZEB1-211ENST00000558440 COL15A1P39059 1388 aa8.17□□□□□ -1.1
ZEB1-211ENST00000558440 SCN4AP35499 1836 aa8.17□□□□□ -1.1
ZEB1-211ENST00000558440 SERPINB2P05120 415 aa8.16□□□□□ -1.1
ZEB1-211ENST00000558440 PCSK2P16519 638 aa8.16□□□□□ -1.1
ZEB1-211ENST00000558440 MZF1P28698 734 aaPredicted RBP8.16□□□□□ -1.1
ZEB1-211ENST00000558440 EIF1AXP47813 144 aaKnown RBP8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms